mRNA_L-elsbetiae_contig1242.1976.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A6H5JLL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL1_9PHAE) HSP 1 Score: 1253 bits (3241), Expect = 0.000e+0 Identity = 670/1034 (64.80%), Postives = 752/1034 (72.73%), Query Frame = 3 Query: 51 MVGKRVR---PRPRATQPPSRSGVACMVLLFTFVAFEFWVLHHHGPTQ--DGLHRHGDYTSPRLPGAFPVEGGDEHISSAALPDEPSVPDSMKGG-SVAGTEAAGQQHQKQRGTAPQA-------KDDAAVSFTLPARPLLEEEKTGELSELRVSSEEDDGYGDMRVAVLVPYSGPGLPLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKRCPQQVLRRGDVVEPDYGGRMQLDTGDYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWNTRPPMPPIHKGMVAGSGGLVPLPNGDWHAMALDPNAPPPADRDRFTYRYCLQWSVTGMSAMEAKFACDISLTPRDGLRVLHDSRRGNARSGSLIGGAAVTLGGVGGFSDAPRLLRSCRDWEGPKVLVLLLCESQREAVATA--IQSEVQNEGLDNALIMYFFVPNMEGEGEEVNRGDLPTKALLNAVGDLCQTRHLLTLPPGFRIARGAEKAVVAALETPVETPRVLVIPQWCVDPVDPHAAEESSSLDLEDLRGQTADGTARLCVSHNKSESSAYIGAGDLEAVVMDAAGSKGGSASLGGADARKPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDEDRDPRKIRNAMALLKSGAVSPVIVVDLWSAPALFLRHIEETSRSGCFDGAYARGLWAAGFSFEILSEAAAFSNHLPPIIEECRPGVFVQMNAYGTFLQDVRRVY---SGSTVYQDMFKPSIRVADKARELSR---RRKAGRRPFGRSV 3089 M G R R R R Q SR +AC VLL +FV E WV+HHHGPT D ++ D S RLPG +EH S P PSVPDSMK S E ++ + +R AP A +D A V+ LP R L +G + S +ED+GYGDMRVAVL+PYSGPGLP WFDAFTDLAA NKDLVDW+IFC EDLAQV TPPNV+M+STSPAELAWMLAGVVYPA+ADE P+ YVSDF AL G +T LQ ARN R AARFIQ LL+KNPY+MVEFKPALGWVFREY+KDYTHWAYGDLDVFFGDLTKGWLEPSEMR+YDI+TYSFGDQ RAYLRGQLTVHKSI KVN IWR+C HLSNY RI+RTMETK Y+LESAEGCYSMALMYS+D+KAKYAVKVFTDMPGG Q DQEEVVITGD LVKRCPQQ RRGDVVEPD+GG+MQ+D G+Y+PVE E++GYFCEYWI P+FQTCLKLK +S TKTNVFLLEGRYYER+FVNLWQ+KVE+GC MGAFHHFQE KGNYRAWNTRP M P+H+GMVAG+GGLVPLPNGDWHAM LDPNAPPPADRDRFTYRYCLQWSV EAKF CDISLTP+DGL LHDSRR LIGGAAVTLGGVGG SD PRLLRSCRDWEGPK++VL+L QRE V I++E + GLDNA I++FF P+ G EVN G LPTKALLNAVGDLCQTRHLL LP FRIARGAE+AVV AL+TP E PRVL+IPQWCVD + E +L+LEDLR Q ADGTA LC S ++ Y+G LE V +G LG A AR + R +N +ALL S AVSPVIVVD+WSAPALFLRHIEE S S CFDGAYARGLWAAGFSFE+L EAAAFS LPP ++CR GV VQM AY TFLQDVRRVY SGS + D+FK IR + R ++ RR+A PF R + Sbjct: 1 MEGSRRRRRSKRERTNQSSSRPVLACGVLLVSFVLVELWVMHHHGPTHRPDPTPQYLDSYS-RLPGVVSPGKAEEH-DSLPRPGAPSVPDSMKAARSRTEDEDVPREPRTERPAAPAAVAWDHPKEDLATVALELPPRQTL----SGSHDGVSGSEDEDNGYGDMRVAVLIPYSGPGLPTWFDAFTDLAALNKDLVDWLIFCEEDLAQVKTPPNVRMMSTSPAELAWMLAGVVYPADADERPDVYVSDFHMALMGDLTDLQMHARNVRGTAARFIQKLLAKNPYYMVEFKPALGWVFREYIKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRDCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQEEVVITGDGLVKRCPQQQGRRGDVVEPDFGGKMQVDRGEYFPVEKEEQGYFCEYWISPNFQTCLKLK--ESLTKTNVFLLEGRYYEREFVNLWQDKVEDGCSMGAFHHFQELKGNYRAWNTRPQMSPVHRGMVAGNGGLVPLPNGDWHAMTLDPNAPPPADRDRFTYRYCLQWSVENERTKEAKFNCDISLTPKDGLLTLHDSRRQEG----LIGGAAVTLGGVGGVSDVPRLLRSCRDWEGPKIIVLMLNNRQRERVVVLDLIRAEEKVGGLDNAYIVFFFSPS--SGGHEVNGGHLPTKALLNAVGDLCQTRHLLILPSDFRIARGAEQAVVTALKTPTEAPRVLIIPQWCVDRDHERGSGELPTLELEDLRRQAADGTADLCFSDTRANRDLYLGGSVLEGAVY----GEGAGEGLGDAGARHRGMGGT---------------------------------RTTKNGLALLLSDAVSPVIVVDMWSAPALFLRHIEELSGSRCFDGAYARGLWAAGFSFEVLPEAAAFSASLPPRTDQCRHGVMVQMGAYSTFLQDVRRVYWRESGS--FTDIFKIGIRSEAEYRAEAKPRSRRRANSHPFHRQM 981
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: D7FVE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE1_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 3.600e-144 Identity = 213/258 (82.56%), Postives = 231/258 (89.53%), Query Frame = 3 Query: 774 GRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKRCPQQVLRRGDVVEPDYGGRMQLDTGDYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYER 1547 G +T LQ ARN R AARFIQ LL+KNPY+MVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMR+YDI+TYSFGDQ RAYLRGQLTVHKSI KVN IWR C HLSNY RI+RTMETK Y+LESAEGCYSMALMYS+D+KAKYAVKVFTDMPGG Q DQEEVVITGD LVKRCPQQ RRGDVVEPD+GG+MQ+D G+Y+PVE E++GYFCEYWI P+FQTCLKLK +S TKTNVFLLEGRYYER Sbjct: 2 GDLTDLQMHARNVRGTAARFIQKLLAKNPYYMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRGCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQDDQEEVVITGDGLVKRCPQQQGRRGDVVEPDFGGKMQVDKGEYFPVETEEQGYFCEYWISPNFQTCLKLK--ESLTKTNVFLLEGRYYER 257
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: D7G2Z3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z3_ECTSI) HSP 1 Score: 405 bits (1042), Expect = 1.560e-115 Identity = 255/695 (36.69%), Postives = 357/695 (51.37%), Query Frame = 3 Query: 483 EDDGYGDMRVAVLVPYSGPGLPLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANAD------------------------------EHPETYV----------SDFREALSGRV-----TALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQE--------EVVITGDALVKRCPQQVLRRGD-----------VVEPDYGGR----------MQLDTGDYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWNTRPPMPPIHKGMVAGSGGLVPLPNGDWHAMALD-PNAPPPADRDRFTYRYCLQWSVTGMS-AMEA---KFACDISLTPRDGLRVLHDSRRG---NARSGSL--IGGAAVTLGGVGGFSDAPRLLRSCRDWEGPKVLVLLL----CESQREAVATAIQSEVQNEGLDNALIMYFFVPNMEGEGEEVNR--GDLPTKALLNAVGDLCQTRHLLTLPPGFRIARGAEKAVVAALET 2297 E D + +VAV+VPY G LP+W+D F + A N LVDWIIFC + L + +PPN+K + +AW+LAGVV P + H E V +D A + RV T + A R +AA F+ LL +PY +VEFKPA GW+FREYL +Y+HWA+GDLDV FGD+ +GWLEP+E++++DI+T+SFGDQ RAYLRGQLT+HK+ A VN++WR C HL+NY R++ LESAEGCYS+A ++ K+ VK +D+ +Q D+E EV+I G LV CP + D GG MQ G VE + KG CE+WI+P QTC+K D ++L+ G+YY+++F+N C GAF+HFQE K +YR+WN+ PP+ P H G+ AG GG+VPLP G W + P PP + YCL W+ S +E+ + AC + ++ + + VL D+R R G +VTLG VGG +D L+ W+GPK++ ++L + RE A ++ L AL+ +V R P KAL+N V DLC+TR+LLTLP R++ A +AV A L + Sbjct: 241 EPDQFNGQKVAVVVPYVGKDLPVWWDVFAEQARLNDGLVDWIIFCDQKLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPGDPSPAHGGDRGDVLDGGDCDGDNFDGDVDGAQKSHAEIEVQENDGNEGEDADVETAATSRVWEESITEVFAMNAVKRKRAASFLHQLLITSPYFIVEFKPAFGWLFREYLTEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKADVNRVWRRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDV---DQEDEEAVAQKRGREVIIDGHGLVTLCPDLEYYYNEPPGAGAGTNYGASNADGGGNGERKEGLSPSMQDAVGPMTSVE-KAKGR-CEHWIKPEHQTCVK----DVGGSQTLYLIGGKYYKQEFINTAASTGGRECRAGAFYHFQEHKLSYRSWNSCPPVYPAHFGISAGPGGIVPLPAGGWRERVVSGPGVKPPPEHTGRVNHYCLGWTERRQSRTLESGRPEQACAVMVSSEEVIVVL-DTRNAAGEQERQGQTDAFNANSVTLGLVGGPADLEALMLEAAQWDGPKIIAMVLGGEDLAATREMDALKGAKYIRGGVLIAALVR-------PPPSPDVPRMIATFPRKALMNLVTDLCETRYLLTLPASARLSPRASQAVSAQLRS 918
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A6H5L1U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U3_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.300e-81 Identity = 222/690 (32.17%), Postives = 315/690 (45.65%), Query Frame = 3 Query: 489 DGYGDMRVAVLVPYSGPGLPLWFDAFTDLAAANKDLVDWIIFCAE-----------DLAQVNTPPNVKMISTSPAELAWMLAGVVYP-------------------ANADEH-------PETYV------SDFREAL-SGRVTAL---------QATARNS--RVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKRCPQ------QVLRRG-----DVVEPDYGGR----------MQLDTGDYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNL--------WQEKVENGCGMGAFHHFQ---EFKGNYRAWNTRPPMPPIHKGMVAGSGGLVPLPNGDWHAMALDPNAPPPADRDRFTYRYCLQWSVTGMSAMEAKFACDISLTPRDGLRVLHDSRRGNARSGSLIGGAAVTLGGVGGFSDAPRLLRSCRDWEGPKVLVLLLCESQREAVATAIQSEVQNEGLDNALIMYFFVPNMEGEGEEVNRGDLPTKALLNAVGDLCQTRHLLTLPPGFRIARGAEKAVVAALET 2297 D + +VAV++PY G LP+W+DAF + A N LVDWIIFC + L + +PPN+K + +AW+LAGVV P N D+ PET+ +D E SG TA +A A+N+ R +AA F+ L +PY +VEFKPA GW+FREYL +Y+HWA+GDLDV FGD+ +GWLEP+E++++DI+T+ RAYLRGQLT+HK+ VN++WR C HL+NY R++ + E+ +ALM R EV+I G LV CP + L G D GG MQ+ G VE + KG CE+WI+P QTC+K D +FL+ G+YY++ + L +Q + H ++ E K +YR WN+RPP+ P H G+ AG GG+VPLP G W P PP + ++ + A + R+G + AVTLG VGG +D + W+GPK++ ++L A + LI+ P + + P KAL+N V DLC+TR+LL LP R+ A +AV A L + Sbjct: 236 DQFNGQKVAVVIPYVGKDLPVWWDAFAEQARLNDGLVDWIIFCDQAKLAPTVALSLKLVRKQSPPNIKFFPMTTRRMAWLLAGVVEPEDPLPVHGGDRGDGLDGGDGNGDKSDGDVESVPETHAEIEVQENDGNEGKDSGVETAASRIWEESITEALAKNAVKRKRAASFLHQLFITSPYFIVEFKPAFGWLFREYLVEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITF------RAYLRGQLTIHKNKVDVNRVWRRCSHLTNYSERLEALSDVDQEDGEA------VALMRGR-----------------------EVIIDGHGLVTLCPDLECFYNEPLGAGAGTNYGTSNADGGGNDESKGGLSPSMQVAVGPMTIVE-KAKGR-CEHWIKPEHQTCVK----DVGGSQTLFLIGGKYYKQGTIVLLLPRNVKFYQSNTRPAKTLYLHHGYKGCKEHKRSYRTWNSRPPVYPAHFGISAGPGGIVPLPAGGWRDRVSGPGIMPPPV----------------IVVLDTRNAAG------------REERQGRT---DAVNANAVTLGLVGGPADLEAFMLEAAQWDGPKIIAMVLDGDDLTATREMDAQKGAKYVRGGVLIVALARPPPRPDVPRMI-ATFPRKALMNLVTDLCETRYLLALPASARLNPRASQAVSAQLRS 852
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: B7FVG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVG7_PHATC) HSP 1 Score: 202 bits (515), Expect = 1.020e-49 Identity = 172/639 (26.92%), Postives = 294/639 (46.01%), Query Frame = 3 Query: 507 RVAVLVPY--SGPGL-PLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTM-ETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKR---CPQQVLRRG--------------DVVEPDYGGRMQLDTGDYYPVEVED-KGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWN---------------TRPPMPPIHKGMVAGSGGLVPLPNGDWHAMALDPNAPPPADRDRFTY-RYCLQWSVTGMSAMEAKFACDISLTPRDGLRVLHDSRRGNARSGSLIGGAAVTLG---------GVGGFSDA-PRLLRSCRDWEGPKVLVLLLCESQREAVATAIQSEV-----QNEGLDNALIMYFFVPNMEGEGEEVNRGDLPTKALLNAVGDLCQTRHLLTLPPGFRIARG 2264 R+A+++P+ +GP L P + + F AA + D VD+++ L N + P+ + W+ + E++ + + A A +R++ + + L + PY +VEFKPALG++F+EYL+ Y+HW Y DLD+ FGDL++ W+ P E+ E+D+VTY FGDQ+R Y RGQ T H++ +VN +WR C++LS R + + E K + ESAEGCYS+AL+ DI+ KYAVK +TD + V + A R Q +G D V D +Q TG+ +++ + K C YW+R ++Q+ L L++S + V+ + G+ +++ + E +E+ F HFQE+K YR T+ P++ ++A S + P G LD A +DR + YCL + ++ CD++++ D RV S +S + +T+ + +D ++ + W+G +++++ E + I+ + GLDNAL+ ++ E + ++R K LLN D TR ++ G + RG Sbjct: 60 RIAIVLPFIAAGPELIPPYLELFCMGAAGSMDTVDFLLIHNGVLT------NWARKADCPSNVIWIDL---------QSTESFARLLIKTMDEIDDADLAFSRDNMIL---LLAKHLEQFPYALVEFKPALGYIFQEYLESYSHWGYSDLDMLFGDLSR-WITPDELTEFDVVTYGFGDQHRLYARGQFTFHRNTPRVNTLWRKCEYLSRMDQRFAKILSEKKKFKFESAEGCYSVALLQHYDIRVKYAVKAWTDTQAKDTVYTHGVYLARSASSFRHVIYKAQSAAQGKVLGELGAGWFESHDYVYADRQRPLQRSTGERESLDLPNMKDVNCMYWVRGTYQSELCLQESAVSSSDTVYWINGQLFKQPYET---EHLESKVSTAPFFHFQEWKRYYRVGQLATQHLSSEVSTFILTKEGSIPLYTQIMAQSSHRLASPLG---LRPLDWKADIKSDRSQLPRSEYCL---ASVPKKYPSRAVCDLTVSWWDEARVKILSSAPGWKSVRIENDVTLTMTLQVTAAQAKAIHALADILEAVVENLERWQGQPIVLVIHVAGITENSLSLIRERFGPNSEMSFGLDNALVAVI----LQQEEDHISR-----KTLLNMAIDAAPTRWYIS---GLELERG 658
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A448ZCW1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCW1_9STRA) HSP 1 Score: 197 bits (502), Expect = 5.360e-48 Identity = 177/650 (27.23%), Postives = 282/650 (43.38%), Query Frame = 3 Query: 507 RVAVLVPYSGPG---LPLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREAL---SGRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIA-KVNQIWRNCQHLSNYVGRIQRTMETKH-YSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKRC---------PQQVL--------RRGDVVEPDYGGRMQLDTGDYYPVE--VEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYR-----AWNTRPPMPPIHKGMVAGSGGLVPL-----PNGDWHAMALDPNAPPPADRDRFTYR-----------YCLQWSVTGMSAMEAKFACDISLTPRDGLRVLH----------DSRRGNARSGSLIGGAAVTLGGVGGFSDAPRLLRSCRDWEG-PKVLVLLLCESQREAVAT-----AIQSEVQNEGLDNALIMYFFVPNMEGEGEEVNRGDLPTKALLNAVGDLCQTRHLLTLPPGFRIARG 2264 R+A+++P+ G G +P + F D AA + LVD++I L + ++ + P N H + +F AL + + + S+ K A + L+ K PY MVEFKPALG VF E+L+ Y+HW Y DLD+ FGDL + W+ P E+ ++DIVTY FGDQ++ YLRGQ T H++ ++NQ+WR C +LS+ R + K SLESAEGCYS A++ + DIK KYAVK FTD+ + V +T + P+++L ++G + + + G P+ V+ + C +W++ +Q+ KL + D+ ++ + G+ Y+ F K+ F HFQE+K YR + P G V G+VP+ N + + P F ++ YCLQ S + K S D + +L DS A + L + GF L + W+G P V+V+ + + + +AT +S++ N G+D L+ F N++ KAL+N D TR + + G+ + RG Sbjct: 84 RLAIIIPFIGEGPEAIPSYLQIFCDTAAGSAGLVDFLIIHDGVLGEGSSASSFSC-----------------PDNVIFHSLETMEEFSRALVKVTDGIPEDELELGGSKEKLAGILTKLIRKYPYVMVEFKPALGHVFEEFLEGYSHWGYSDLDILFGDLER-WITPDELNDFDIVTYGFGDQDKVYLRGQFTFHRNDPERINQLWRKCDYLSHMDTRFANFLSGKEKLSLESAEGCYSEAILNTDDIKVKYAVKAFTDVQTKDTAYTHGVYVTTGTKKDKTVIYKAGSDHPEELLTLPRNWFEKKGSLYA-NSNEMLYRPVGKRIPLSPTVQKEDVKCMHWVKSKYQS--KLCIDNIDSNDTLYWIHGQLYKEKFEIA---KMPGNIMTAPFFHFQEWKRYYRKAQLGGFQRNGPF----TGFVLTKEGIVPIYSTKTDNKNRKQLNKAVANTSPLGHSLFQWQDARRKDLPRRLYCLQ-SAPRKNPSTTKCKFMTSWWDSDNVEILSWAPAWSTVDIDSEVTMAITLQLHADQVHDASAMQGFYRILELYLN--HWQGQPTVIVVHVAGATPDFIATMKTKLGPESDLTNFGMDTVLVGAIFSENLD---------TFSRKALMNMAIDASPTRFVTS---GYELERG 690
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A7S4HPF1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPF1_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.380e-45 Identity = 166/563 (29.48%), Postives = 241/563 (42.81%), Query Frame = 3 Query: 471 VSSEEDDGY---GDMRVAVLVPYSGP----------GLPLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSNYVGRIQRTMETKH-YSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPG--------------GNQGDQEEVVITGD-----ALVKRCPQQVLRR---------GDVVEPDYGGRMQLDT-----GDYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYR----AWNTRPPMPPIHKGMVAGSGGLVPLPNG------DWHAMALDPNAPPPA----------DRDRFTYR-YCLQWSVTGMSAMEAKFACDISLTPRD--GLRVLHDSRRGNARSGSLIGGAAVTL 1949 V++ DDG G R+A+++PY P LP +F F A + LVD++IF + PP+ P + L V + E F R+ + + R+ + + + PY +VEFK A G +F +YLK YTHW Y D DV FG+L + W+ P E+ +YDIVTY +GDQ+RAYLRGQ T HK+ AK QIWR C LS R R + ESAEGCYS +++ D+ KYAVK D+ G+ GD+ V G ++ P G +++ + G R+++ + GD P E C +W S+Q + L D D+ VFL+ G Y++ F + E N + +F+HF E+K YR A R P G V G VPLP D +L PA DR RF +C++ S + A CD + RD G+R++H+ + +GG T+ Sbjct: 168 VANSADDGAIPEGKHRIAIVIPYLPPPQTQTGGATAALPPYFPVFARTAGGSASLVDFLIFHDGSIPAHLLPPSKSSADHDPYAEEYSLPPNVKLIDVGGI-EGMTKLFLRVADERIKSGELEMDEERL--TKLVGRHIRGKPYVLVEFKAAYGHIFEDYLKAYTHWGYSDFDVAFGNLPR-WVSPDELTDYDIVTYGYGDQDRAYLRGQFTFHKNTAKTRQIWRGCSFLSEIDKRFARAAAGEEKLQFESAEGCYSHVVLHRNDLTVKYAVKALNDLGDEGDTAYTHGLYIGVGSNGDRSVVWKAGPNHGDGVRLRDLPLNWFEAPGSPYADVPGQLLQREVGKRVRIHSHRDKYGDNPPKGKEAN---CMFWAPKSYQPDICLV--DVDSTDTVFLVNGILYKQPFEQV--EMPGNVVSL-SFYHFMEWKRYYRPMQLATMARAPTDGGIGGWVLSGEGAVPLPPASSVSSMDSRQKSLGSTWDGPAVLHRHHASVDDRTRFPPSPFCIRSSQRKVPPRPAVAQCDYFTSWRDAEGVRIVHEGED-RTKGRHAVGGDESTV 717
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A1E7F5F1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5F1_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.500e-45 Identity = 196/718 (27.30%), Postives = 305/718 (42.48%), Query Frame = 3 Query: 390 DDAAVSFTLPARPLLEEEKTGELSELRVSSEEDDGYGDMRVAVLVPYSGPG---LPLWFDAFTDLAAANKDLVDWIIFCAEDLAQVNTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTAL----------QATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIA-KVNQIWRNCQHLSNYVGRIQRTM---ETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPG------------------GNQGDQEEVVITGDALVKR-----CPQQVLRRGDVVEPDYGGRMQLDTG--DYYPVEVEDKGYFCEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWN---------------TRPPMPPIHKGMV---AGSGG----------LVPLPNG----DWHAMALDPNAPPPADRDRFTYR-YCLQWSVTGMSAMEAKFACDISLTPRDGLRV--LHDSRRGNARSGSLIGGAAVTLG----------GVGGFSDAPRLLRSCRDWEG-PKVLVLLLCESQREAVAT-----AIQSEVQNEGLDNALIMYFFVPNMEGEGEEVNRGDLPTKALLNAVGDLCQTRHLLTLPPGFRIARG 2264 D +++SF+ R + TG +S+ R ++ R+A+++P+ G +P + + F A + LVD+++ L P + + S S E PE + +L G AL + S+ K A + + PY MVEFKPALG +F+ YL YTHW Y DLD+ FGDL + W+ P E+ E+DIVTY FGDQ+R YLRGQ T+H++ K+NQ+WR C +LS+ R ++ + ET H+ ESAEGCYS A++ DIK KYAVK FTD G ++ +I + R P R + D + G + P+ +E + C YW + +Q+ L + DS T T ++ + G+ Y+ + + K+ F HFQE+K YR+ ++ + P + SGG +VP P G WH + + DR++ +R YCLQ + M C + RD L V L + + L A+TL + GF L + W+G P V+V+ + + E + T +S + N G+D L+ F + + V+R KAL+N D TR ++ G+ + RG Sbjct: 15 DPSSLSFSASLRHKI----TGNISDGRKIQQKH------RIAIIIPFIGESPDAIPSYLELFCATAGGSASLVDFLLIHDGVL----DPYHQQKSSDSTTEKLXXXXXXDTTRALFSCPENVIFHSLGSLEGISRALVKVVDGKPEQELKLGGSKEKLAGILTKYIRNYPYVMVEFKPALGHIFQHYLDGYTHWGYSDLDIMFGDLER-WITPDELTEFDIVTYGFGDQHRVYLRGQFTIHRNDPEKINQLWRPCDYLSHMDTRFEQVLSKEETLHF--ESAEGCYSAAVLERDDIKIKYAVKAFTDAEQEKKKKEDKDTAYTHGVYVGTGKKKDRTIIYKAGMDNRRGLSTIPSDWFERKGSIYNDPNTLLYKSVGKREILPM-IEKESVKCMYWAQKKYQSRLCIDGVDS-TDT-IYWIHGQLYKEKYELV---KLPGDIVTAPFFHFQEWKRYYRSAQLGGFQRNGPFAGFVLSKEGILPFYSTSADKRRTSGGKSRDNYSEKVVVPSPLGHTLFQWHGIESN-------DREQLPHRFYCLQ---SAMKESPPTTKCKFVTSWRDSLNVEILSGAPAWSKVDIDLEVTMAITLQLHADQLSDSEAIQGFFKILALYLN--RWQGQPVVIVVHVAGATPEFITTMRAKLGPESNLSNFGMDTVLVAAIF----SEKPDTVSR-----KALMNMAIDASPTRFVIA---GYELERG 685
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: K0T0P4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T0P4_THAOC) HSP 1 Score: 189 bits (479), Expect = 7.050e-45 Identity = 142/458 (31.00%), Postives = 214/458 (46.72%), Query Frame = 3 Query: 507 RVAVLVPY-----SGPGLPLWFDAFTDLAAANKDLVDWIIF-CAEDLAQVNT----PPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTALQATARNSRVKAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAK-VNQIWRNCQHLSNYVGRIQRTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDAL-----------VKRCPQQVLRRGDVVE-------------------PDYGGR---MQLDTGDYYPVE----VEDKGYF------CEYWIRPSFQTCLKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWNTRPPMPPIHK--GMVAGSGGLVPL 1712 R+A+++PY P P +FD FT AA + D +D++IF C + + P NVK+I + L+ + T V+D R+ + L+ K + T + PY +VE+KPA G +F +Y++DY+HW Y DLDV FGD+T+ W++ E YDIVTY FGDQ+R YLRGQ T H++ +NQIWR+C++LS ++ TKH ESAEGCYS A++ +DIK K+AVK FTD+ G++ + G L + P+ VL VE P Y R +Q G+ VE +++KG C YW ++Q + + + + + L G Y++ F + +G F HFQE+K YR P G+V G++P+ Sbjct: 192 RLAIIIPYLPDADGAPTFPPYFDLFTTSAAGSADKIDFLIFHCFVPPSLMPNEDALPANVKLIDMNEDSKKCGLSRLF----------TRVTDERQKNNEMKITLE--------KLTGMLSTQIIDYPYILVEYKPAFGHIFADYIEDYSHWGYSDLDVVFGDVTR-WIDDDEWNGYDIVTYGFGDQDRLYLRGQFTFHRNDPMYINQIWRHCRYLS----KMDVRYATKHIKFESAEGCYSQAVISRKDIKVKWAVKAFTDV-----GEKSPIYTQGVYLSFGSPPSLTSSISYHPKSVLYTASSVETGASLLRLSSMWFEDKSKHPKYLERKLPIQKLVGERTQVETYRMLQNKGVKVDEEIKCMYWAPATYQLDICTVEGNVASDDVITLEHGVLYKQKFQERQNKLFPDGIKSFPFFHFQEWKRVYRRTELLPVQNARRSSHGLVVTKEGVLPM 621
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Match: A0A6U5LPU4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5LPU4_9EUKA) HSP 1 Score: 179 bits (454), Expect = 1.130e-44 Identity = 133/414 (32.13%), Postives = 198/414 (47.83%), Query Frame = 3 Query: 501 DMRVAVLVPYSGPGLPLWFDAFTDLAAANKDLVDWIIFCAEDLAQV--NTPPNVKMISTSPAELAWMLAGVVYPANADEHPETYVSDFREALSGRVTALQATARNSRV--KAARFIQTLLSKNPYHMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMREYDIVTYSFGDQNRAYLRGQLTVHKSIAKVNQIWRNCQHLSN-----------YVGRIQ-RTMETKHYSLESAEGCYSMALMYSRDIKAKYAVKVFTDMPGGNQGDQEEVVITGDALVKRCPQQVLRRGDVVEPDYGGR-------------MQLDTGDYYPVEVEDKGYFCEYWIRPSFQTC---LKLKKSDSDTKTNVFLLEGRYYERDFVNLWQEKVENGCGMGAFHHFQEFKGNYRAWN 1646 + ++ +++P+ GP LP+W F A + LVD+++F LA + + P NVK I LA + + EAL+ RN+ V KA RF + K P + E+KP G VF +YLK Y+HW Y DLD+ G+L +LE +E+ E+D+VTY+FGDQ YLRGQ T+H++ +++ IW+ C HL+ +V R++ R ++ SAEGCYS + +RDI+ K A K F + QG E + V +C RG V+ D GR +QL G P+EV +G C W+ ++ C L + D T+ F L G +Y + F + NGC AF HFQE+K +AW+ Sbjct: 48 NFKIGMVIPWVGP-LPIWTSYFVSSARLSAPLVDFLVFHEAQLALIPDDVPENVKFIDLGNGGLA----------------QIFGLQLGEALN-------LPIRNASVIIKAMRF---MFEKWPRLVAEYKPTFGSVFEKYLKGYSHWGYCDLDMVIGNLPI-FLEYAELSEHDLVTYTFGDQEAFYLRGQWTLHRNERRISSIWQGCSHLAAQLQKELLLKVAWVRRMESRGIQNYPKRFNSAEGCYSQRAVEARDIRFKMANKQFVGL--ATQGGAEHSIYAVSGAVWQCA-----RGVQVDVDELGRFSSARECRAELPGVQLPIGTRVPLEVSAEG--CGQWMPKEWRMCAPQLIEQGPDVAATTSTFFLNGGFYGQRFRPAGGTVLANGCRQLAFFHFQEWK---KAWS 421 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1242.1976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1242.1976.1 >prot_L-elsbetiae_contig1242.1976.1 ID=prot_L-elsbetiae_contig1242.1976.1|Name=mRNA_L-elsbetiae_contig1242.1976.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1040bp MVGKRVRPRPRATQPPSRSGVACMVLLFTFVAFEFWVLHHHGPTQDGLHRback to top mRNA from alignment at L-elsbetiae_contig1242:2983..15237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1242.1976.1 ID=mRNA_L-elsbetiae_contig1242.1976.1|Name=mRNA_L-elsbetiae_contig1242.1976.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12255bp|location=Sequence derived from alignment at L-elsbetiae_contig1242:2983..15237+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1242:2983..15237+ >mRNA_L-elsbetiae_contig1242.1976.1 ID=mRNA_L-elsbetiae_contig1242.1976.1|Name=mRNA_L-elsbetiae_contig1242.1976.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6240bp|location=Sequence derived from alignment at L-elsbetiae_contig1242:2983..15237+ (Laminarionema elsbetiae ELsaHSoW15)back to top |