mRNA_L-elsbetiae_contig12367.1940.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A6H5JKH9_9PHAE (DUF1995 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH9_9PHAE) HSP 1 Score: 306 bits (784), Expect = 2.000e-100 Identity = 204/261 (78.16%), Postives = 213/261 (81.61%), Query Frame = 1 Query: 37 MGKCTPLSFACALLVCYVPLARPLVVGVRSRLAA-------------TSRTTVSTSAMMSTPSTPVPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAASRKAKGKNKXXXXXXXXXXXXXXXXXXXXXARTGVTGRVAPPGTEVLLVVAPKQAELK 780 MGKCTPL +A ALL+ VPLARP +VG SRL A SR + MSTPSTPVPRNIKDTVSCLRAAVQ EGLKAQQSRMDVDLPFAARLGVET+D DK KKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDE+AKKA K W+KGVPYKGKVTCMDPRPAKGPKLKRGDT+ALAGFA QV AS+KAK XXXXXXXXXXXXXXXXXXXXX RTG T RV PPGTEVLLVVAPKQ ELK Sbjct: 1 MGKCTPLLYASALLLFRVPLARPFLVGSGSRLQAGKPSCYHYGRRHACSRAPTK-NMKMSTPSTPVPRNIKDTVSCLRAAVQ-EGLKAQQSRMDVDLPFAARLGVETSDEDKDK--KKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEDAKKAIKVWSKGVPYKGKVTCMDPRPAKGPKLKRGDTNALAGFAMQVEASKKAK----XXXXXXXXXXXXXXXXXXXXXXRTGTTARVVPPGTEVLLVVAPKQQELK 253
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: D8LR98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR98_ECTSI) HSP 1 Score: 286 bits (733), Expect = 4.810e-94 Identity = 165/212 (77.83%), Postives = 174/212 (82.08%), Query Frame = 1 Query: 37 MGKCTPLSFACALLVCYVPLARPLVVGVRSRLAA-------------TSRTTVSTSAMMSTPSTPVPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAASRKAKGKNK 633 MGKCTPL +ACALL+ V LARP +VG SRL A SR T S MSTPSTPVPRNIKDTVSCLRAAVQ EGLKAQQSRMDVDLPFAARLGVET+D DK KKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDE+AKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDT+ALAGFA QV AS+KA+ K + Sbjct: 1 MGKCTPLLYACALLLFRVRLARPFLVGSGSRLQAGKPSCYHHGRRHACSRATTK-SMKMSTPSTPVPRNIKDTVSCLRAAVQ-EGLKAQQSRMDVDLPFAARLGVETSDEDKDK--KKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEDAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTNALAGFAMQVEASKKAQKKEQ 208
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A836CFU0_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU0_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.620e-25 Identity = 79/186 (42.47%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 226 LRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAASRKAKGKNKXXXXXXXXXXXXXXXXXXXXXARTGVTGRVAPPGTEVLLVVAPKQAELKV 783 +RAAVQ EGLKA+ SRMDV+LP+ ARLGVE D DVE++DRELARLF+EMFD IGD VVAF TD++A A W G YKG V M+P+ +K K G GFA+++ A A G + T V P GTEV ++VAP++ EL++ Sbjct: 1 MRAAVQ-EGLKARCSRMDVELPYGARLGVEGVAKD--------APVDVEQSDRELARLFVEMFDPIGDATVVAFRTDKQAAAARNLWGLGS-YKGTVQSMEPKKSKVKKS--GKKSRAGGFAKKLEA---ALGDD------------------------TEGPSAVVPAGTEVFVLVAPQEKELQM 147
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A6V1TW35_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TW35_HETAK) HSP 1 Score: 102 bits (254), Expect = 8.730e-22 Identity = 74/201 (36.82%), Postives = 107/201 (53.23%), Query Frame = 1 Query: 187 TPVPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAAD--VERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAASRKAKGKNKXXXXXXXXXXXXXXXXXXXXXARTGVTGRVAPPGTEVLLVVAPKQAELKV 783 T VP N+K+T+S +R ++Q L+A+ SRM V+LP A G+E AD K T D VE++DRELARL +EMF +G+ +V FP+D++ KKA +W G Y+G + + P+ KG K + GFA AA ++A+G + G V PPGTEV+L VAP Q +++V Sbjct: 49 TKVPTNVKETISEMRKSIQA-ALQAKNSRMAVELPRGADFGMEKADD-----VKSATQYDGGVEKSDRELARLLVEMFQPLGESLVCTFPSDQQVKKAKSSW--GDQYEGTIKTLTPKKTKGGKRR-----GKGGFA---AAVKEAEGADA-----------------------VGPLNGVLPPGTEVVLAVAPSQKDVQV 210
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A7S2V579_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V579_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.260e-15 Identity = 67/195 (34.36%), Postives = 93/195 (47.69%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAASRKAKGKNKXXXXXXXXXXXXXXXXXXXXXARTGVTGRVAPPGTEVLLVVAPKQAEL 777 VP N+KDTV+ LR +VQ E L+ + SRM VDLP A G+E ++K + A + DRELARL +EMF +G+ +V AF TD++AK+A KAW Y+GK+ + P+ D L R+ RK+ + P GTEVL+VVAP +L Sbjct: 55 VPANVKDTVTELRKSVQ-EALRDRCSRMHVDLPPGAVFGIE---NEKELSVVEQVGAGAKN-DRELARLLVEMFQPLGENLVCAFSTDKQAKQAKKAWENSF-YQGKIQALVPK----------KDDDLMFSRRKFKKGRKS----------------FAAALDEEFNGDNSFASSILPKGTEVLIVVAPTPKDL 217
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A7S4G6C5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G6C5_9EUGL) HSP 1 Score: 79.0 bits (193), Expect = 4.730e-13 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDP---RPAKGPK 552 VPR+IK+T + L+ +VQ L+ +QSRM++++P AA+ VE+ K +ER+DRELARLF+EMFD IG+ VV+ F + AK+A + W KG + +D +PA PK Sbjct: 177 VPRDIKETTAQLKQSVQA-ALQGRQSRMEIEMPIAAKFAVESGPLGKGRLPA------MERSDRELARLFVEMFDPIGESVVLVFNENRLAKEAKRKW---ATTKGAIIALDSPTGKPAAKPK 289
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: B7FWV6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWV6_PHATC) HSP 1 Score: 73.6 bits (179), Expect = 2.200e-11 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIG-DQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAA 606 +PR++K+ V R A Q E LK + SRMD++ P A+ +E ++ + + T +++R+DRELARLF++MF +G D++ V F A KA K W + +D R ++ K K+ ++ GFA ++AA Sbjct: 61 LPRDVKEAVKSCREATQ-EALKNRISRMDIEFPVGAKFNIEKGEA-RRNAGETPTKDELDRSDRELARLFVDMFQPVGGDRIAVVFADVSAADKARKTWKGDTTAICNIVSLDRRKSQASKKKKKNSK---GFAAKLAA 194
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A7S0LDJ4_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LDJ4_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 6.090e-11 Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIGDQVVVAFPTDEEAKKATKAWNKGVPYKGKV-----TCMDPRPAKGPKLK 558 +P NI VS LR +VQ L+A+ SR++V+LP AA GVET +K K ADV++++RELARLF+ MF+ G V FP ++A A + W + KV C D A P+ K Sbjct: 190 LPNNINALVSQLRGSVQA-ALQARTSRIEVELPPAAEYGVET--QEKRKRGSKVALADVQQSERELARLFIGMFEGTGLVPEVLFPDRQQAAAACQIWGAEIEPHAKVRALTGVCADGAAANAPRTK 313
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A7S2LM49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LM49_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.220e-11 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAAD-VERADRELARLFLEMFDVIG-DQVVVAFPTDEEAKKATKAW 486 +P+++K+ VS R +VQ E LK + SRMD+++P A+ GVE K + + D +E +DRELARLF++MF +G + + V F D A A K W Sbjct: 62 LPKDVKEAVSVCRQSVQ-EALKGRISRMDIEMPVGAKFGVEKGGQKKSSVQEDGVSRDTLETSDRELARLFVDMFQPVGGENIAVIFKEDRIANLARKRW 160
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Match: A0A1Z5KBU0_FISSO (DUF1995 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBU0_FISSO) HSP 1 Score: 68.2 bits (165), Expect = 1.150e-9 Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 193 VPRNIKDTVSCLRAAVQQEGLKAQQSRMDVDLPFAARLGVETADSDKXXXXKKYTAADVERADRELARLFLEMFDVIG-DQVVVAFPTDEEAKKATKAWNKGVPYKGKVTCMDPRPAKGPKLKRGDTDALAGFARQVAA 606 +P+++K+ VS R A Q E LK + SRMD++ P + VE + + + D +R+DRELARLF++MF +G D++ V F D++AK+A W ++ ++ +G K + GFA ++AA Sbjct: 17 LPKDVKEAVSKCREATQ-EALKNRISRMDIEFPVGTKFNVEKSATKSKGPP---SLQDFQRSDRELARLFVDMFQPVGGDRIAVIFKDDDQAKQAKNLWKGDASAASRILALN----RGKKQR--TAKKSLGFANKLAA 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12367.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12367.1940.1 >prot_L-elsbetiae_contig12367.1940.1 ID=prot_L-elsbetiae_contig12367.1940.1|Name=mRNA_L-elsbetiae_contig12367.1940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp VTLGKAGVSFLAMGKCTPLSFACALLVCYVPLARPLVVGVRSRLAATSRTback to top mRNA from alignment at L-elsbetiae_contig12367:1078..4909- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12367.1940.1 ID=mRNA_L-elsbetiae_contig12367.1940.1|Name=mRNA_L-elsbetiae_contig12367.1940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3832bp|location=Sequence derived from alignment at L-elsbetiae_contig12367:1078..4909- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12367:1078..4909- >mRNA_L-elsbetiae_contig12367.1940.1 ID=mRNA_L-elsbetiae_contig12367.1940.1|Name=mRNA_L-elsbetiae_contig12367.1940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig12367:1078..4909- (Laminarionema elsbetiae ELsaHSoW15)back to top |