mRNA_L-elsbetiae_contig1234.1928.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 3.110e-172 Identity = 249/282 (88.30%), Postives = 267/282 (94.68%), Query Frame = 1 Query: 88 DHAAAVALQRAWRKRSAYMFVKDLKQEKLCREQREEMRAGLHVDCEACASAGKKSADIKSRNLKKAWKDADELLFKGMARVQISDRGDNWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGVGLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAE 933 DHAAAVALQRAWRKRSAY+FVKDLKQEKLCR+ R+EMRAGLHVDCEAC+SAGKKSADIKSRN KKAWKD DELLFKGMARVQ+SDRGDNWN+RWQEAL+LPN+T M+I+YKRRSL+AVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGG+AGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYL TGVGLC+PPMCLLDYKGFRMLAQAHLPLG TSLKMGTNDGGRTVLNDCP LD+RTA AA+ALGLRAHI G + WV ++ E Sbjct: 11 DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI--GPRDWVGVQEEE 290
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.780e-72 Identity = 135/254 (53.15%), Postives = 163/254 (64.17%), Query Frame = 1 Query: 316 GMARVQISDRGDNWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPA-LDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDP 1071 G+ RV++ D GDNWN +QEA LP T ME YK L VY DF AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y GV GL PMC+LDYKGFRM+ A LPLG +L G++DGG V+ A + R EAA L LR H P R G +++ ADVE H+G D LY+LDLAR+ PPEDP Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVGVGDAEVARVLEEAAARLRLRPH---------PCR---------------GTTVYSGADVEVHKGLDGNLYMLDLARSMPPEDP 248
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.270e-67 Identity = 154/350 (44.00%), Postives = 199/350 (56.86%), Query Frame = 1 Query: 280 KAWKDADELLFKGMARVQISDRGDNWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDPDATPHLSGMLSVSAKVVVQ--KEGEKAKAATVT---KAHTTLVDYDILY---LDGTVEKATPA-HMLRDLRLFIFYRLLRPEFVR 1299 ++W+ EL+F + G NWNE +Q AL+LP ETP + K L V DF TAVTYG+TIISEYFL KS++ K LGGVAGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP+ SL+ G+++GG+TV N+ +L ++ AA+ L LR H V + +++A D+EGH G YLLD AR FPPE P HLS +LS V V EK +VT H Y I+Y LD + E + D +++R+LRPEFV+ Sbjct: 224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTH------------------------RVNDKDMYSACDIEGHVGEGDSHYLLDFARTFPPESPKKVEHLSDILSDMTPVYVHIGDPPEKGIILSVTVPLDMHNLARKY-IMYQVQLDSSNEVIEVCGDKVSDRHQSVYWRMLRPEFVK 547
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 214 bits (545), Expect = 2.940e-62 Identity = 119/242 (49.17%), Postives = 150/242 (61.98%), Query Frame = 1 Query: 352 NWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDP 1071 NWNE +Q AL+LP +TP + K + V DF AVTYG+TIISEYFL KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL + GL CL+DYKGFRM AQA LP+ +L+ G++D GRTV ND L ++ A+ L LR H V ++ +++A D+EGH G YLLD AR+FPPE P Sbjct: 10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTHWVNDKE------------------------MYSACDIEGHVGEGGSHYLLDFARSFPPESP 227
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.100e-51 Identity = 107/220 (48.64%), Postives = 131/220 (59.55%), Query Frame = 1 Query: 418 KRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPL-GPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDP 1071 K ++L A+ DF+ AVTYGRTIISEYFL E KSV P +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA ++L+GA +K + GL L+DYKGFRM AQA LPL +L+ G+ D G TV++ AL + A L L+AH R GG L DVEGH G D LY++D AR FPPE P Sbjct: 19 KYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAH-----------------------RGRGGAELQLGCDVEGHRGTDGNLYVIDAARVFPPESP 215
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.300e-39 Identity = 105/288 (36.46%), Postives = 149/288 (51.74%), Query Frame = 1 Query: 352 NWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGVG-LCVPPMCLLDYKGFRMLAQAHLPL-------GPTSLKMGTNDGGRTVLN----------------------DCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLH------AAADVEGHEGADSRLYLLDLARAFPPEDPDATPHLSGMLSV 1107 +WNER+Q L LP+ + E ++ L A Y+DFV TA TYG +ISE FL+E +K++ + + G+AGG+KY +RGI FKLA G + PYGG AA+KA GHEL+GA+ Y + V L +P L+DY+G+R+LAQ LP+ P +LK+G+ V + P L R A + A ++ + +A + E++ V Q AA DVEGHEG D Y++D ARAFPPE P+ + SV Sbjct: 29 DWNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPIKPGKSLENPGTLKVGSAKACEVVFSVEQEEEPTAPPIAATKPGRYPQPYPLLPREPLRRAGS----ALLMPANERIFALMEAASNELNIAPHQVFCQTTRKPVKVPAAFDVEGHEGMDGLFYVVDFARAFPPEAPNLAEQMHESASV 311
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: A0A7S0DIC4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIC4_9EUKA) HSP 1 Score: 164 bits (416), Expect = 3.630e-39 Identity = 113/265 (42.64%), Postives = 147/265 (55.47%), Query Frame = 1 Query: 325 RVQISDRGDNWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLAD----GSQG-PYGGSDEA---AAKAAGHELRGASEYLKTGVG-LCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDPDATPHLS 1092 R +I D D W++ + EA +LP E+ K R+L + +DF+ A YGRT ISEYFL + ++VK +LGGVAGG KYL RGILFKLA GS G YGG E AAKAAGHEL+GA K V + VP L+D+ G+R++A LPL + G+ND G+T+ ++ E A+ L + H + + VP +LHAA D+EGH G D + YLLDLAR FPPE TPHLS Sbjct: 148 RRKIIDMKD-WSKSFLEAEDLPENNVEEVLRKYRTLTKLSTDFIEIAKAYGRTAISEYFLKDKARTVKKHKLGGVAGGDKYLVRGILFKLAVDPAMGSHGWVYGGKKENFEYAAKAAGHELKGAINMYKYHVKKIRVPMQALVDFHGYRIVAMPLLPL--KKMIYGSNDAGKTIHRSDEDFNQIMKEIAEDLHVAGHYIVDKDG-VP------------------NMLHAAGDIEGHLGKDEKYYLLDLARTFPPESVWDTPHLS 390
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: L8HJ57_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ57_ACACA) HSP 1 Score: 161 bits (408), Expect = 3.350e-38 Identity = 92/227 (40.53%), Postives = 134/227 (59.03%), Query Frame = 1 Query: 397 TPMEIDYK-RRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDP 1071 TP++ Y R+L + DF++++ +YGR IISE F+ ++MK++KP +GG+ GG KY+ ILFK A S G YG SD AA+K AGHEL+G Y G+ LC+P M L+DY+GFR+LA + LP+ +++ G+ND G T+ + L + AA+ L ++ H G + H Q+L + AD+EGH G D+R YLLD +R PPE P Sbjct: 276 TPLDERYNTNRALIHLAQDFIYSSCSYGRIIISEAFVPDHMKTIKPTAMGGIVGGDKYIVNNILFKFAVDSHGLYG-SDYAASKVAGHELKGLLAYFNLGIRDLCLPLMALIDYRGFRLLAMSILPIKKSTIVYGSNDYGHTMHAENKKLGAKMRIAARKLNIKPHRCG------------VSKAH-------SQVLPSPADLEGHVGGDNRTYLLDFSRVMPPEFP 482
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: D3BU09_POLPP (Clu domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BU09_POLPP) HSP 1 Score: 160 bits (405), Expect = 6.050e-38 Identity = 99/265 (37.36%), Postives = 147/265 (55.47%), Query Frame = 1 Query: 307 LFKGMARVQISDRGD-NWNERWQEALNLPNETPMEIDYKRRSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFK------LADG--SQGPYGGSDEAAAKAAGHELRGASEYLKTGVGLC-VPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPEDP 1071 ++K R Q D D WNE++Q ++LP E + K + L+ V +DFV+ A T+G+ IISE L E K++KP LGGVAGG KY + I+FK +A G G SDE A K+AGHEL+G + +++ GL P M ++DY+G+R+LA ++LP+ S+ G+NDGG+T+ N P +++ A + + H+VG +L++ D+E H+G D R Y+LD ARAFPPE P Sbjct: 307 IWKEEERCQREDGQDYTWNEKFQYIMDLP-----EAEDKYKYLSIVANDFVYCANTFGKIIISERNLPEDQKTIKPLSLGGVAGGHKYKCQDIIFKFVVDVEIAPGLWMYGDTSRSDEKAQKSAGHELKGLNHFMEHSNGLIRFPLMAIIDYRGYRLLAISNLPITKKSIVYGSNDGGKTIHNSDPIIEKEMERLAAIMNTKGHMVG---------------------LTSPKLMYGPGDLEIHKGTDGRYYMLDFARAFPPEYP 545
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Match: Q54YP3_DICDI (Clu domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54YP3_DICDI) HSP 1 Score: 160 bits (404), Expect = 1.420e-37 Identity = 92/215 (42.79%), Postives = 133/215 (61.86%), Query Frame = 1 Query: 424 RSLNAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGPTSLKMGTNDGGRTVLNDCPALDRRTAEAAQALGLRAHIVGGRQAWVPYRDAETQEVHRRKRNVGGQLLHAAADVEGHEGADSRLYLLDLARAFPPE 1065 R L+ + DFV+TA YG+ IISE L ++K++KP +GGVAGG KY+ GILFKLA SQG Y G D+ A KAAGHEL+G Y V GL P M L+DY+G+R++A + LP+ ++ G++DGG +V N +++ E+A+ L ++ H+VG +D + +LL++ D+EGH G+DS+ YLLD AR FPP+ Sbjct: 410 RELSKLAHDFVYTAKIYGKVIISELTLPLHLKTIKPINIGGVAGGHKYIALGILFKLALDSQGLYVG-DQNAMKAAGHELKGLMSYYNCRVEGLHHPLMALIDYRGYRLVAMSLLPINSDTIVYGSSDGGISVHNSDEDFNQKMIESAKILNIKGHMVG--------KDEQ-------------KLLYSCGDIEGHIGSDSKRYLLDFARVFPPQ 602 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1234.1928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1234.1928.1 >prot_L-elsbetiae_contig1234.1928.1 ID=prot_L-elsbetiae_contig1234.1928.1|Name=mRNA_L-elsbetiae_contig1234.1928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=582bp IRSNVSSKNLVPKDLRESAEQGPRDALWADHAAAVALQRAWRKRSAYMFVback to top mRNA from alignment at L-elsbetiae_contig1234:14084..26073- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1234.1928.1 ID=mRNA_L-elsbetiae_contig1234.1928.1|Name=mRNA_L-elsbetiae_contig1234.1928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11990bp|location=Sequence derived from alignment at L-elsbetiae_contig1234:14084..26073- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1234:14084..26073- >mRNA_L-elsbetiae_contig1234.1928.1 ID=mRNA_L-elsbetiae_contig1234.1928.1|Name=mRNA_L-elsbetiae_contig1234.1928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3492bp|location=Sequence derived from alignment at L-elsbetiae_contig1234:14084..26073- (Laminarionema elsbetiae ELsaHSoW15)back to top |