mRNA_L-elsbetiae_contig1234.1927.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1234.1927.1
Unique NamemRNA_L-elsbetiae_contig1234.1927.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 1.300e-68
Identity = 127/145 (87.59%), Postives = 134/145 (92.41%), Query Frame = 1
Query: 2167 VEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGLWTVCSDRTDLLLTIVKELVKVTGVRFKESVNQKLRSKTAKSKIVGFNFDLNDIRDIEAVVTPMTIYQ 2601
            VEVVVRTLKLVLR FQRRWMKSEQSSSE+GMHLLVTQFLNLVTG H+RS +FW ENVTTGVCQRFGTVALTESERAGLWTVCSDR ++LLTIVKELVKVTGVRFKESVNQKLRS+ AKS +VGF F L DIRDIEAVVTPM IYQ
Sbjct:  313 VEVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIYQ 457          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: D7G5H0_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H0_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 8.280e-36
Identity = 105/297 (35.35%), Postives = 156/297 (52.53%), Query Frame = 1
Query: 1714 AKRTNGFSVRPA---NGDGERVDGYRGAGREKPPPLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGLWTVCSDRTDLLLTIVKELVKVTGVRFKESVNQKLRSKTAKSKIVGFNFDLNDIRDIEAVVTPMTI 2595
            A+  +G   +PA     DG   DGYR        PLSPDALT F+ G  +  +RN+++ +AT  +L   VP     L +        ++L  +LH +GVN+RH+G +R  +   ++  +                            +++D  L E++ RTLK +LR FQR WMK+E+S+SEQGM +LV +FLNLVTG+H  S  FW++NV TGV QRFG V+LT SER  +  + S    +L   V +L ++ GV   E       + +     VGF F ++DI +I+ +V  M I
Sbjct:  144 AETNDGGDQQPAAVTTSDGS-ADGYRFI------PLSPDALTFFTKGSTDRAERNQEIHDATAAMLEAAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGRVRYLLMEQNKPENE---------------------------LLKDMMLTEMIARTLKNILRCFQRTWMKAERSTSEQGMRMLVVRFLNLVTGAHVNSATFWKKNVLTGVLQRFGLVSLTTSERRDVQKI-SRNPCVLQDCVFKLTEMQGVELTEDAKAHFYADSP----VGFEFMVSDIHEIKPIVRYMHI 401          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A7S2RNV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNV0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.140e-30
Identity = 94/279 (33.69%), Postives = 141/279 (50.54%), Query Frame = 1
Query: 1795 EKPPPLSPDALTAFSN--GDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERA------GLWTVCSD----RTDLLLTIVKELVKVTGVRFKESVNQKLRSKTAKSKIVGFNFDLNDIRDIEAVVTPMTI 2595
            ++P PL PDA++ F+   G   A     +V  ATQ L+  +VP  A  L +  P EL  ++ + +LH +GVN+RH+GL+R+Y+                           R   +  A  +R R LVE+V R+LK +L+  QR+WM++ +SSS  GM LLV QFLNL++GSH  S++FW E +  G+  RFG   L   ER       G+ T  S+     +  L  +V  L ++TG+ F   V     S      + G+ F   DI +++ VV  M I
Sbjct:   56 DRPVPLLPDAMSLFAELAGRENAARATAEVEAATQTLVHDVVPRLAASLLSCPPAELEFLDFALELHSHGVNLRHMGLIRSYIP--------------------------RHNHDRRAETLRSRLLVEIVARSLKNMLKDDQRKWMRANRSSSWHGMSLLVAQFLNLISGSHPSSRVFWGEALLEGMVNRFGECCLFPEERLPAEGQEGVMTWESEFRRGGSSRLKDLVFRLAELTGIVFSSQVKSDFDSDP--DAVNGYEFLAQDIEELKPVVKYMHI 306          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: D8LF63_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF63_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.700e-29
Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 1
Query: 1861 DRNRDVTEATQFLLTVLVPATARLLCAKSPQELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGLWTVCSDRTDLLLTIVKELVKVTGVRFKESVNQKLRSKTAKSKIVGFNFDLNDIRDIEAVVTPMTI 2595
            D ++ + +AT  +L V VP     L +        ++L  +LH +GVN+RH+G +R  +   ++  +                           G+++D  L E++ RTLK +LR FQR WMK+E+S+SEQGM +LV +FLNLVTG+H  S  FW+E V TGV QRFG V+LT SER  +  +  D   +L   V +L ++ GV   E       + +     VGF F ++DIR+I  +V  M I
Sbjct:  442 DGDQQIHDATSVMLEVAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGKVRFLLMEQNKPEN---------------------------GLLKDMMLTEMIARTLKNILRCFQRTWMKAEKSTSEQGMRMLVVRFLNLVTGAHINSATFWKEKVLTGVLQRFGLVSLTTSERRDVQKISRDPY-VLQDCVFKLTEMQGVVLTEDTKAHFYADSP----VGFEFTVSDIREINPIVRYMHI 654          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A7S1UGK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGK4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.470e-28
Identity = 73/178 (41.01%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 1798 KPPPLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAK--SPQELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFW 2325
            +P  L+PDALTAF   D +  + NRDV EAT FL   ++PA A  LCAK  +   + ++N+S ++H+ GVNMRH+GLLRA++               P    ++ + +            R   L E+V RTLK +LR + RRWM+SE+SSSE G+ ++V  FLNL TGSH    +FW
Sbjct:   26 EPKALNPDALTAFGRHDEDVFEHNRDVKEATLFLFRDVIPALATSLCAKYKTASAVRKMNVSLEMHKCGVNMRHLGLLRAHI---------------PLDAEANHVQI------------RQILLREIVGRTLKQLLRDYMRRWMRSERSSSELGLIMVVVNFLNLTTGSHLNRNLFW 176          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A1V9YQ23_9STRA (Clu domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQ23_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.770e-10
Identity = 75/247 (30.36%), Postives = 113/247 (45.75%), Query Frame = 1
Query: 1798 KPPPLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQELS-EINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASN-------------------------PASG------SSSSLAVARRTGNTSA--------------GIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGL 2400
            +P PLS DAL+  SN  P+ +     VT AT  LL  ++PA AR L  +     +   NL  +LH +G+N+RH+GLLRA       G+++    SN                           SG      S+++L + R   + S               G +R+  LVEV+ RT+K +LR   RR ++S   +       L+  +LN ++GS + +  FWE  V  G   RFG+VA++  ER  L
Sbjct: 1456 QPAPLSSDALSFLSNQTPDWETHVDRVTAATTQLLDDIIPAFARKLVTRPNYVTAPHFNLVHELHRHGINVRHLGLLRAQFRRQLTGTAAMTFNSNVVATTEDMTRELQRGDVVYIHGDAYTVSGAPTDTLSTTTLTLDRPYPHDSTQHVSVGTGPIVDPTGSVRELLLVEVLQRTIKNLLRFAMRRLLRSRGLAVGPNHSALLLTYLNYLSGSGEGAHAFWEVFVFDGARARFGSVAVSYVERMNL 1702          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A024G0J9_9STRA (Clu domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G0J9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 8.210e-10
Identity = 64/234 (27.35%), Postives = 107/234 (45.73%), Query Frame = 1
Query: 1810 LSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQELSEIN------------------------------LSQKLHEYGVNMRHIGLLRAYVTPPSRG--------SSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQG-MHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERA 2394
            LSPDAL + +    +   + +DV +AT  LL  ++P  A+ +C  +   LS  N                              L++ +H +G+N+RH+GLLRA++     G        +  T   S+ A  S+ +   +     T +  +    L E+V RTLK V+R F R   K  ++      ++ ++ Q LNL TG  + S  FW+  +  GV  RFG +AL+++E +
Sbjct: 1611 LSPDALFSTTYSTSDFFQQAKDVEDATIELLNTVIPRFAKEMCQNAQYYLSLCNENSKWSNSNQEIEDGKNEFEVIESGWNKSALTRGMHRHGINVRHLGLLRAHLKSDDAGEFFCEPIATKKTNHLSHLAQTSNLTPCESGCKSMTRSSSLHALVLAEMVARTLKNVIRHFLREEAKQTKTGLNSAFLNYVIVQTLNLFTGGRRGSDSFWKTFLIRGVRVRFGNIALSQNEES 1844          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A7R9UEN8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEN8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.640e-10
Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 1972 LSQKLHEYGVNMRHIGLLRAY----VTPPSRGSSSTPSASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSH--KRSKIFWEENVTTGVCQRFGTVALTESER 2391
            L   +H +GVN+RH+GLLRA+    V   S G                   V R+  +    +M    L+E+V R LK  L+ FQRRWM+  QS+S  G+H LV +FLN VTG+   +  + FWE+ ++  +   FG+ ALT  ER
Sbjct:  469 LCDTMHLHGVNIRHMGLLRAHCLCEVNDESNGDD-----------------VTRQAVDYLGHLM----LIEMVCRELKNALKDFQRRWMRKNQSASRYGIHSLVARFLNHVTGAVPIQNCQAFWED-LSDRILDHFGSAALTAKER 592          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: A0A6A3JP86_9STRA (Clu domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JP86_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.120e-9
Identity = 71/247 (28.74%), Postives = 117/247 (47.37%), Query Frame = 1
Query: 1807 PLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQ-ELSEINLSQKLHEYGVNMRHIGLLRA------------------------YVTPPSRGS-------SSTPSA-------------SNPASGSS-SSLAV--ARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHL-LVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGL 2400
            PLSPDAL++ +   P+ +D+   V +AT++L+  ++P  A  L  KS   E  E +L +++H +G+NMRH+GLLRA                        +     RGS       +ST S              S P  G S  ++AV   R      A  +R   L E+V RT K ++R   R+  ++  +     +H  ++ Q LNL++GS + S+  W+ ++  G+  RFG  A++E ++  L
Sbjct: 1647 PLSPDALSSLTYRTPDWQDQALGVEDATKYLVKEVIPLFAVKLSQKSDYFESPEFDLVKEMHRHGINMRHLGLLRAQFLFQLSGTATLQYSTAEIQTSQDFTREVDRGSHVYINGKTSTVSRDRSHRFDATCITLSTPHMGDSIQNVAVYGGRLDCRERAATIRRFLLGEMVARTFKNIIRHLMRQAARTNATGLTPMLHKQILIQSLNLLSGSRRGSETLWKTHIYEGIRFRFGLRAVSEVDKQNL 1893          
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Match: T0PZQ0_SAPDV (Clu domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PZQ0_SAPDV)

HSP 1 Score: 71.6 bits (174), Expect = 1.210e-8
Identity = 69/247 (27.94%), Postives = 111/247 (44.94%), Query Frame = 1
Query: 1798 KPPPLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPATARLLCAKSPQ-ELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPSASNPAS------------------GSSSSLAVARR------------------TGNTSAGI---------MRDRALVEVVVRTLKLVLRGFQRRWMKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVALTESERAGL 2400
            +P PLS DAL+  +N  P+ +     VT AT  LL  ++PA AR L  +    +    +L  +LH +G+N+RH+G LRA       GS +    SN  +                  G + +++ +R                   T N +            +R+R LVE++ RT+K +LR   R+ ++S Q +       LV  +LN ++G    +  FW+ +V  GV  RFG +A++  ER  L
Sbjct: 1464 QPLPLSSDALSFLTNQTPDWETHVERVTAATAHLLDDVIPAFARKLATRPMYVDAPGFDLVAELHRHGINVRHLGYLRAQFRYQLSGSVAMTFNSNVVTTTQDMTREVQRGDVVYIHGDTYTISTSRNDEVSTTTLTLDRPYPHDSTQNVTVATGAILDPTQQLRERLLVEMLQRTIKNLLRFALRQQLQSRQLAMGPNHAQLVLTYLNFLSGVGDGAHAFWDIHVFDGVRSRFGPIAVSYVERLNL 1710          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1234.1927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G9G7_ECTSI1.300e-6887.59Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G5H0_ECTSI8.280e-3635.35eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2RNV0_9STRA6.140e-3033.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LF63_ECTSI8.700e-2935.51eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S1UGK4_9STRA1.470e-2841.01Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1V9YQ23_9STRA2.770e-1030.36Clu domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A024G0J9_9STRA8.210e-1027.35Clu domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7R9UEN8_9STRA9.640e-1036.99Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6A3JP86_9STRA7.120e-928.74Clu domain-containing protein n=7 Tax=Phytophthora... [more]
T0PZQ0_SAPDV1.210e-827.94Clu domain-containing protein n=2 Tax=Saprolegnia ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1234contigL-elsbetiae_contig1234:3595..13834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.8
Seed ortholog evalue2.5e-64
Seed eggNOG ortholog2880.D7G9G7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Clustered mitochondria
EggNOG OGs2DZMV@1,2S753@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size3802
Cds size2331
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1234.1927.1prot_L-elsbetiae_contig1234.1927.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1234 4793..13561 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.0915906-UTR-L-elsbetiae_contig1234:3594..47921622815430.0915906-UTR-L-elsbetiae_contig1234:3594..4792Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1234 3595..4792 -
1691682894.3153346-UTR-L-elsbetiae_contig1234:3594..47921691682894.3153346-UTR-L-elsbetiae_contig1234:3594..4792Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1234 3595..4792 -
1622815430.260086-UTR-L-elsbetiae_contig1234:13561..138341622815430.260086-UTR-L-elsbetiae_contig1234:13561..13834Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1234 13562..13834 -
1691682894.4333856-UTR-L-elsbetiae_contig1234:13561..138341691682894.4333856-UTR-L-elsbetiae_contig1234:13561..13834Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1234 13562..13834 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815430.10219-CDS-L-elsbetiae_contig1234:4792..49221622815430.10219-CDS-L-elsbetiae_contig1234:4792..4922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 4793..4922 -
1691682894.3319964-CDS-L-elsbetiae_contig1234:4792..49221691682894.3319964-CDS-L-elsbetiae_contig1234:4792..4922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 4793..4922 -
1622815430.1162283-CDS-L-elsbetiae_contig1234:6480..65971622815430.1162283-CDS-L-elsbetiae_contig1234:6480..6597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 6481..6597 -
1691682894.3416138-CDS-L-elsbetiae_contig1234:6480..65971691682894.3416138-CDS-L-elsbetiae_contig1234:6480..6597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 6481..6597 -
1622815430.1554687-CDS-L-elsbetiae_contig1234:7232..73361622815430.1554687-CDS-L-elsbetiae_contig1234:7232..7336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 7233..7336 -
1691682894.3515449-CDS-L-elsbetiae_contig1234:7232..73361691682894.3515449-CDS-L-elsbetiae_contig1234:7232..7336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 7233..7336 -
1622815430.1664028-CDS-L-elsbetiae_contig1234:8031..81181622815430.1664028-CDS-L-elsbetiae_contig1234:8031..8118Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 8032..8118 -
1691682894.3615882-CDS-L-elsbetiae_contig1234:8031..81181691682894.3615882-CDS-L-elsbetiae_contig1234:8031..8118Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 8032..8118 -
1622815430.1832747-CDS-L-elsbetiae_contig1234:8903..91041622815430.1832747-CDS-L-elsbetiae_contig1234:8903..9104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 8904..9104 -
1691682894.3724732-CDS-L-elsbetiae_contig1234:8903..91041691682894.3724732-CDS-L-elsbetiae_contig1234:8903..9104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 8904..9104 -
1622815430.197829-CDS-L-elsbetiae_contig1234:9920..100141622815430.197829-CDS-L-elsbetiae_contig1234:9920..10014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 9921..10014 -
1691682894.38104-CDS-L-elsbetiae_contig1234:9920..100141691682894.38104-CDS-L-elsbetiae_contig1234:9920..10014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 9921..10014 -
1622815430.2136366-CDS-L-elsbetiae_contig1234:10862..112221622815430.2136366-CDS-L-elsbetiae_contig1234:10862..11222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 10863..11222 -
1691682894.3905127-CDS-L-elsbetiae_contig1234:10862..112221691682894.3905127-CDS-L-elsbetiae_contig1234:10862..11222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 10863..11222 -
1622815430.227621-CDS-L-elsbetiae_contig1234:11584..116931622815430.227621-CDS-L-elsbetiae_contig1234:11584..11693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 11585..11693 -
1691682894.4046545-CDS-L-elsbetiae_contig1234:11584..116931691682894.4046545-CDS-L-elsbetiae_contig1234:11584..11693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 11585..11693 -
1622815430.2383118-CDS-L-elsbetiae_contig1234:12103..130721622815430.2383118-CDS-L-elsbetiae_contig1234:12103..13072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 12104..13072 -
1691682894.4182785-CDS-L-elsbetiae_contig1234:12103..130721691682894.4182785-CDS-L-elsbetiae_contig1234:12103..13072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 12104..13072 -
1622815430.2505553-CDS-L-elsbetiae_contig1234:13401..135611622815430.2505553-CDS-L-elsbetiae_contig1234:13401..13561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 13402..13561 -
1691682894.426259-CDS-L-elsbetiae_contig1234:13401..135611691682894.426259-CDS-L-elsbetiae_contig1234:13401..13561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1234 13402..13561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1234.1927.1

>prot_L-elsbetiae_contig1234.1927.1 ID=prot_L-elsbetiae_contig1234.1927.1|Name=mRNA_L-elsbetiae_contig1234.1927.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=777bp
MLRKENTRGREAVARENDDGDGSDSDSDSASSEAVNDYGGFETTSETSSR
FSAAAGVRFNSERFLALVHPAASPAGAIPRKATGSGRVTGHRRPNQHKPT
TLAFGPEGERGYDAFSSKSLNSQTSEGMVLGSPISTIIRHQTSNGGLTSS
SSPPPPPPKGQGRGEDSSAGGQAGAAPEVFLPSAGAGYDSFSSKSLLSNG
SCSSMSELSIPPFTARGLSDGRAGQRGLGGGPGGDPDDGDSVGSHVAPDG
YSTFKHSSQTGIDARAHHRMKSISSSTKGAYGGGGGGSSSAVATGEHRQQ
VSAAGTFGGAVDVSSVVEVPENKGQRRTSMDKIWPTAGGKRKEQASAIVD
NADSEDDDAADVSGGSGYDGFNLQPAGYEDFNDHENDGALVPPRSLTEAP
GYDSFQGSKGSSRSISSSMLSSSTFGRHGERPPAPPAPLPAVSSRPASSA
PQQSAPPQAHPQSEPPLGRAAAEAHKSVPIAKRTNGFSVRPANGDGERVD
GYRGAGREKPPPLSPDALTAFSNGDPEAKDRNRDVTEATQFLLTVLVPAT
ARLLCAKSPQELSEINLSQKLHEYGVNMRHIGLLRAYVTPPSRGSSSTPS
ASNPASGSSSSLAVARRTGNTSAGIMRDRALVEVVVRTLKLVLRGFQRRW
MKSEQSSSEQGMHLLVTQFLNLVTGSHKRSKIFWEENVTTGVCQRFGTVA
LTESERAGLWTVCSDRTDLLLTIVKELVKVTGVRFKESVNQKLRSKTAKS
KIVGFNFDLNDIRDIEAVVTPMTIYQ*
back to top

mRNA from alignment at L-elsbetiae_contig1234:3595..13834-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1234.1927.1 ID=mRNA_L-elsbetiae_contig1234.1927.1|Name=mRNA_L-elsbetiae_contig1234.1927.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10240bp|location=Sequence derived from alignment at L-elsbetiae_contig1234:3595..13834- (Laminarionema elsbetiae ELsaHSoW15)
CACGAGGCCGACCCCGCCGCCGACGGCTCCGGCTACGACGCCGCCGAACT GGACGGCGACGACAGCGACAGCTGCTACCAGGAGAGCGGCATTGACCACC AGGGGGTCGCGGCGGCAGCAGCCACCGCGCCCCCCGACGGTGCGGTGCGT AGGCCCTCGAGCGGCCCGGGGCTCGGCGGTGTCGATGGAGGCCGGGCCTA CGGCGGGGGCGCGAGTGCAGCTAGCTCAGGTGCCCGCGTGGCGGGGGAGG AGCGGGAGTTTATTCGGCGCGACATGCTTCGGAAGGAGAACACGCGGGGC AGGGAGGCCGTGGCCAGGGAGAACGACGACGGTGACGGATCGGATTCGGA TTCGGATAGCGCAAGCAGTGAGGCTGTCAATGATTACGGCGGGTTCGAAA CGACCTCCGAGACGAGCTCCAGGTTTTCCGCAGGTAAGAGGGGAGGGTGG CGTGGCAAGGGCACGGGGGACGGGAGGTGGCTGGGGGGAAAGCAGGGAGA AACAGACAGCGGAGAGAGAAACACACACAGAGAGACAGAGAGAGACAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGGCGGAAATCGGAGACAGGCGCGTG ATAAAAGGGTAGTTACGGATTGAAAACTTCTTTAGGTGTACATACATCCA TCCCTACAGACTGCACCGCGCCGAACGTCGTCGATCCCGGGTTTTCCCTC CTTACCTCCCTCTCACAACATCATCGCCAAACGCACGCCCTCGTCACTTC TTTGTCTCTCAGCAGCAGGAGTGCGCTTCAATTCCGAGCGGTTCCTTGCG CTCGTCCACCCGGCAGCTTCTCCTGCAGGCGCCATACCCAGAAAGGCGAC CGGCAGCGGCCGCGTGACGGGGCATCGGCGGCCGAATCAGCACAAGCCCA CGACGCTTGCGTTCGGCCCGGAAGGGGAGCGGGGGTACGACGCTTTCAGC AGCAAGTCGCTCAACTCCCAGACCTCTGAAGGCATGGTGCTGGGGTCGCC CATCAGCACCATCATTCGCCACCAAACCAGCAACGGGGGCTTGACGTCGT CGTCATCGCCGCCGCCGCCGCCGCCGAAAGGACAAGGACGAGGGGAAGAC AGCAGCGCCGGCGGGCAAGCGGGGGCGGCGCCGGAGGTCTTCCTGCCGTC AGCGGGGGCGGGCTACGATTCGTTCAGCAGCAAGTCGCTCCTCTCAAACG GGTCGTGCAGCTCCATGTCGGAGCTGTCGATCCCGCCCTTCACCGCCAGG GGGTTGAGCGACGGCCGTGCTGGCCAGCGGGGCTTGGGTGGCGGCCCGGG CGGTGACCCCGACGATGGCGACAGCGTTGGCAGTCACGTGGCCCCGGACG GGTACAGCACCTTCAAACACTCGTCTCAGACTGGCATCGACGCACGCGCA CACCACCGGATGAAGTCGATTTCCTCTTCGACGAAGGGGGCGTACGGAGG CGGCGGCGGCGGCAGCAGCAGCGCCGTCGCCACCGGGGAGCACCGGCAGC AGGTCTCGGCGGCGGGTACGTTCGGCGGGGCTGTAGACGTGTCGTCGGTT GTAGAGGTTCCCGAAAACAAGGGCCAGCGGAGGACCTCGATGGACAAGAT TTGGCCGACTGCTGGTGGCAAGCGGAAGGAGCAGGCTTCTGCGATAGTGG ACAACGCAGACAGCGAAGACGACGACGCCGCTGACGTTAGTGGAGGGTCC GGCTACGATGGCTTCAATCTGCAGCCAGCTGGTGAGTTGAGTTCTGAAGG CAGCAAGCGCCGCGACTTGGCGGCGTAGAGACCCTCGTCCTCTGCAAAGC AGCGAGCAAGCGGTGAAGCGATGTGTAGAGCACCGCCGTGTGCTTGTGCT GGTACTCATGCAAAGTCTGTCTACTCCTTCATAGAAAATTCAGAATTTTG GCTTGCCTTTGCCCCGAAGGGCGGTACTTTGGAGTCTCCGCGGAGCTAAA GGCAGAGCCAGGCAGACTGGCGCATGCTTTTTCTGTGGTATCTTGACTGC GTTGCTAGAAAGGACACGCGTCTCTCTCTCCCTGCTTGGTTCCCGTACCA TCCATCATAACTGTGACCGACTGATGATGCTTCTGCTAGATCAACGTGTT ATTTTTCTTTGGCCGGGTTTTTGCGTGGCTGGCCTTGCTAGGCTACGAGG ACTTCAACGATCACGAGAATGACGGCGCCCTTGTGCCTCCAAGGAGCCTT ACCGAGGCCCCAGGCTATGACTCCTTCCAGGGATCCAAGGGATCCAGCAG GTATGTATGCTAATCAGCATACGTACGTATAAAAAACAAAACGTACACCT TAGATGTAAATTTCCATTCGCCGCGCGAGGCCCTGTGATGCTTTCTTGGG TCTCTTCTTGAGGAGATATGGTACACATTGTGCGGCGAATGAATTGCATG TGTGCGTACGTGCGCCGGTGTCTTTCGCTTCGTGGCACGCTTCGCATACT ATGTAGCCCGCCGCGGCCCTCTCCTGATCCGATCCCTGCCCGGCGTTTGG GGCGGCAGTTTTTCCCTCGCACACGACACGAAGACAAGCCTCACCGGCCG TGTTTTGTTTCTCTGCCCCCCCCCCCCCCCCCCTTCGCTACGGCCGCGGA CGAGTTGCGCAGGTCGATCTCTAGCAGCATGCTCAGCAGCAGCACCTTCG GGAGGCACGGCGAACGGCCGCCGGCGCCGCCGGCGCCGCTGCCCGCGGTG TCGTCTCGCCCGGCCTCATCAGCACCACAGCAGTCCGCGCCGCCTCAGGC TCACCCGCAATCCGAGCCACCGCTGGGGCGCGCCGCCGCCGAGGCGCATA AGAGCGTGCCAATCGCGAAAAGGACGAACGGCTTCTCTGTTCGGCCTGCG AACGGGGACGGCGAGAGGGTGGACGGGTACCGCGGAGCGGGCCGCGAGAA GCCGCCACCCCTGAGCCCGGACGCGCTGACGGCCTTCTCGAACGGGGACC CAGAAGCCAAGGACAGGAACAGGTGTGTGCAGTATATCAGGTGGGGGGCA CACGCGCCGCGGGCTGCACTATTTTGTGTTTACGGTTTTTCACCGCATGT TCGAGACCCTTTTTACCCGGATAATTCAAGTGTGCGGGTGAGAGACTGAG CGGGCTCTGTGTACGCCCTCTCCGTTTGTTTGTTTGCTGGTTTGTGTTTG ATTTCTTGGGACCTTTGTCTCTAACGAGCAAAGTGAAATCACATTTTTCT CGACGAAAATATATACCTGGTGCGATAGTTCGGATGCGTCATCAGTGCTG CTTTTACACCCGTTCGTGCCGATTCGAACATCGAACGCCCATGCCAAGCG TGTTGCGTTACAGTGGGTGGGGGTCGCGGCGAGAGAGCCTCGGCGATTGA ATTTCCTCAACTTGCTCTGTCGGTGGTGTTTTGACGGCCTTTCGTTGTGT CTCCCCTTCTACGTAGGTGGCACGTACATACCGATAGCTTTGAGATATGT TTCGCTAAGGTTGCCTCACGTTATCGGGTCGAATGACCCCGTCTCCTTTT GTGTGCGTTCCTGTCCCCGTTTGTGTGCGTGTTCCATTTGGGTCGTCTCT TTCCTCGTCTAATTGCATCTCCTCCCTGTGTCTTCATACCGCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCGCCGCCGCCGCCACCGCTTCTTTTGTTG CCGGCTGTATTTTCCGTGGCCGGTCTCGTCAACAACGTTTCCGGCACGGT TTCGCTCCACACCCCTGTCGTCTGCTGTGCGGCATCATTACCACGGGTGT GATGGATGCATCTCGCGATCCTGTTTTCCGCCGATTCGGGTTGTTTCGAT CTTACCGACTAAACCTAAAGGGATGTGACGGAAGCCACGCAGTTCCTGCT CACCGTCTTGGTGCCGGCCACCGCCAGGCTTCTGTGCGCCAAGTCACCGC AAGAACTCTCCGAGGTAGGTGCCGCCCGCGGCAGCAGGCGAACGAGGCCG ATGTTGCTGCTAAGCTATACATACAACGATGTACATGCAAACGAGTGCCG TTACCATGCGTGTGATCGCACCCACCGAGGTTTTCGCACGCACCCGCCGG AGTTAGACCGTGGAAGATACCGGATATCTTCGCTAGTCGAAGTCGTTACG TCATGTTGGTCGAGTCGCGCGCGACGATTTCGTCGCGATGCTCTGTCTCG ATGCTTCGTCAAGTGCTGCTGTGTAAAATAAATACGTCAGGGGAGGTCGT GCACTCACATTCGTACAGATGCCCGCCCGCCCTCTCTGCTCTGAGAGCAG GCGGGTATGTATATGTATTAATTAGCAAGCACCGTTGTCAGTAGCACTTG GCAAAAGCATTCCCTCCTGCTTGTGGTGTGCGGCATCGGTTGTTCGACGA GATTTCGGGGGAAAGCGCCGATACATTCCACAGGCACGAGGTGTCTCGTA TAAGAAGCGTGCTCATGTCGGCGCAGATGTTTCGCGGGTCGCTCCACGAC TGCGTCAATGTTCAGGGCTAACTGCTTAGCACCGCTGTTGTCACCCCCGC CGCACACCCTTCCCCCCTTATCAAGGTAAAACAGCCCCCTCTCCAGCCGG CTCTATTTCCTGCGCACGTTTGGCCCTCTCCCAGAGCGAAAAATTAAAAT ACATGAGGGTTTCGTATACCCCCCCTTAGAAGGAGTGACTTGACGTGTTC GCCCTCTGCTTTTTTCTCATATGTTGGCGGCCCGGCCTTTTTCTGCCCAA CCGACCGACCGCGGACGTAAAATGAACCAGATCAACCTGTCGCAGAAGCT CCACGAATACGGGGTAAACATGCGCCACATCGGGCTCCTCCGGGCCTACG TAACTCCGCCAAGTCGCGGGTCTTCTTCAACACCTTCTGCTTCTAACCCT GCTTCTGGTTCTTCTTCTTCCCTCGCCGTGGCGCGTAGAACCGGCAATAC CAGCGCGGGTATCATGAGAGACCGTGCTTTGGTGAGTATATCGTATTCTT TTTTCTCTTATATTTTTTTTTGTGAACGAGCAGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTCCTGCGATGTAACGAGAAGCCGTGTCATCATGTCC GCCCACAACAGTATGTAGTTGTACTCGCAATTTCTCTGACGCCTTTCGTC GATATCATCTGTATTTTGTCTTCTCTATTTTTTCTCTCCCTCCCTCTCTC CCTCCCTCCTCCCGCCCGCCCGACCGCCCGCCCTCTCTTCTCTCTTATCT CATTCTCTCTCTCCGTCTCTATCTCTCGGCCCCCCTCTGAATCGCTGTAA AGTGTATTTATTGCGCTCAACCGATGGATCTGACCTCACGCTCTCGCTCC GTTCAGATATGTAGAATATGTGAGACTACCAAGAGGTGTAGCGTGCTCAA AAACTCAATTTTCGGGGTTTTGAGGTATATTTAGTTCCAAAGAACAGTTT TTTTTCACGAGATCTCCCGCTGAACCATTCGTGCCTTGAGTGAATGCTCA CGGGTCGGTAGACACGCAAGGCCACCTACCTAACCCAACCCTAACCCTAC GGTCTCTAGACACGCAAGGCCACATAAGTATACCGCATTGCCATACATAG AAATGGGGAACGCCTACGTATCTTACTACAGGGTGCACTTGTTTCTTAAC ACGATCAATGAACTTTTAATAGACTGCAGAGCAGTCTTGTGTTTCAACAT TTACCTTCACGTCTCATCCATGCGTTGTGGGACGGAATGCAACGCTTGTC GCGTGTGACGCCGCAGGTGGAAGTCGTGGTGCGAACTCTGAAGTTGGTCC TGAGAGGGTTCCAGCGGCGCTGGATGAAGTCGGAGCAGAGCTCCTCCGAG CAGGTATCTGAACCACGGCACTCAAAAACAAAAGCACGCATTTTCGCTTC TCTTTTCTTTCTCACTCTCCTGCTTTTCATCATTTCCTTTTATTTATGTT GTTTCTTCCGGTACGCAGACTGGCACTTTAATCTACGCTTCCTTCCCCGA GCAGAGTCAGTTATGAAAGGTGCAATGTACTCGGTGTGCTTGGATGGTTA TTTTAGTGCGTGACGCTCCGCGCTACAATCATGGCTTCTTGCTCCCTCAC CCCTGTCTGCAGGCACTGGAAATCAGACCTCTCATCTCTAACTCGCCTTG TCTCCTCCTCCTACCCTCTCCGCCCGAGCTGTTCCCCAGAAAGTCGAACC CGCGTTTCCTGCCTCGAAACCACAGCCTTCTCTGCATCCACAACGCTTCG CGGCAGGGCCTCACCGTCGCCATGATGTAGTTTCGCCTGCTCCCCCACCA ACTCGAAAGCACCCACCAAGTTTCGTGTGTGCTGTTTGCCCGCGCTCGTC ACTCGGTCAGCTCAAAACTGAATAAATAACTCCTCAAGAACACCGCATCT CATTTTCGTTTTTTTGGTACTCGCTAGATTTCAACGTTTCGCTACGCTGC TGCTGCTGCTGCTGCTGCTGCTGCAACACTTCCTGACTGGCTTGTACTGC TGCGGCATACTGCGGTCTCTCTCTGTCTCTCTGTCTCTGTCGTAAAAGGG GATGCACCTGTTGGTAACGCAGTTCCTAAACCTTGTGACCGGGAGCCACA AGCGGTCCAAAATCTTCTGGGAGGAGAACGTCACCACCGGCGTCTGCCAA AGGTGAGGGGAGGCTAGGTGAATAGCTGGTATATATGCAGAGGAGAGGAG ACATGCCCGCATTTGGTTCTGCCGATCAAAGGTTGGTGTCATCTTTTGGT GTTTTATGCGAAGTGTTTGTTTTCTCAATGGAAGACAGCGCGGCAAGCCA TCACCGTCAGCATTTGCACTCCTCCAAAGCCTCACCAATGTCGTCAACGA CTGCGACATCATCAGCATCTGCAGCACAACTGCCAGGGCCGTTGTAAGAA GGCATCATCACATTGCGCTGTACGTCCGGGGTGACTCTGCAAGTGTTGGT GTATATATATTGTTTTGCCGTCCGTTAGTTGTTAGTTTCACCCCCTTTGG CATGTATTTGATGGCACGAAAACTACCGGAGCAATGCACCGGGGTCTTTT GATTGCTTTATCCGAAGGGTAATAATGCTGCGCCGAATTAAAAGTTCTTG TCTGAACACCTTGCTATTCGTTTTTTTGACACGGCGAAGGTCTTTCAACC CGGTAAAGCCTCGGCACCACTGCAGACGGCACGGAGTAGCTAAATGTGTT GCTCCTCGTGCGAACACGCGGCTCCTTGCGCACGTTTCTTCCTTCATCCG ATGAGCCCCCCCCCGCCCCTTGTCCGGCCACGCTTAGGTTCGGCACGGTA GCCCTGACCGAATCGGAACGCGCGGGACTGTGGACGGTTTGCTCCGACCG GACGGACCTTCTCCTCACCATCGTCAAGGAGCTGGTCAAGGTCACCGGCG TAAGGTAACCAACCAACCACCCAAACAAACAAAAAACGACCCCCCCCTTC TACCCTCTCCCGCCGAAGTACGTGCACACCCGGGTTGCAGGGAGGCCCGT AACGCGCTTTTTTGTAATTTTTGTTCATGGCCACCGAAAATTCGGAGCCC CCGCTGGCCCGCTTCGCCATCGGGCTCGGCAGACATTCCACAATAGCTCC CGCTGTAGTTGAGATCCAAAATTCCTCCAACCTTTAATAAAAGAAGCCTA AAGAAGCTGTCTACAGCCTGGCACCATCGCAATACTTTTTAGGGCGCGTT TTTGGCTGCCCCCACAGCGATAAAGGTTCAAATCGGGGAGACTTTTTCGG GAAAAAAACAGTATAATTGGAGGTAGATTCATGGTGCGTAATTTTATTCC CTTCTGTGAAGAGAGGTCACTTTGGGTGTTCGCTGATGTTACTGTCATGC CTGGGATTCAAAACTGCTCCAACCTTGAAACGTATACGTATGTGCCTCCA CTGTGCCGAAGCGCCGAGCGATTTAGTGAACTCCTTTGATTGCCCCCAGC CGCGTGAAGTTTGCTGTTTGGGAGCAACATTTGAGCCTAAAAAGCAGCAG CACACGGCTTCTTCCAGTCGCGACGACGCAGCATTCCTCGAGTTCAGGGC AAAAAGAAGGCAAACAAATTACTTGCAGACGTAGAATGTGACATATCTGA GATCTCCAGCAAAATTTTAGAGCAAGTGGCGGGCGGCCTGTGTAAAGAGC ATCTTGTGCTGAAAGGTTGTGACTCAACCGATTCCAGCGAACAAAAATTC GGCTGGCAGCTGAAGAGAATTATTCCTGTTTGCGTAGACTCCGGTGGCCA TTTTTTATTGCACGGAGCCTCCTGCAACCTGGGTGGTGCAAGACGCCGGA GGACATCGGATTAGTAAACATGTAGGAGGACATGCGTGGGATGCCCGCTC ATCATCTCAGCCTTCACGCAACCCGCTGAGTATCTGAAGGCGCTTTTGCC TTGCGCGCGCTTGGCGCCTTACATCTTGCCTTCTGCGAGCCTGGCCTGCC GAAAACCCACTAAATAGACGTGCGTGCTCCGTCCCTCAAGACTTTGTAGG GATGGGTGCGGGACCCTACGATGTGACGTTCACGGTAAGCGTATCACCAA TCAGTGCACCCCCGCCCTTGGGCCGAGTGATGCTTGTGAACCGATTCGAA CCGATTCGAACCGATTCTCACCCCGGAGCACAAGAGGTGGAGGTGAAGAG TATTGCTTCCACGAAAAATAGGTGCCCCGGGGCTGTGTTGTATGTATGTG TGTTTCAACCTATGTTTTTTCCGTCTGCGTGGCTCCCGTTTCCACCGGCG GGCCCGATCTTTTTCGAATGGGCTCTCTTCTCTGAGAACGGCGCTACCGA CCGCTGCCATCTGCGTCTGTGACCGCGAATCAATCGCCTGTAAGTTCAAG GCCGTGTGCGCTACAATTCTGTTTTATGTTGCGACGTTTTGTCATGTTTC TAACGACATTTTCCGCTAATACGCCTGTTCATCGACTACAATGTTTTGTT TTTGGGCATCAGGTTTAAGGAGAGCGTCAACCAGAAGCTGCGCAGTAAGA CAGCCAAGTCTAAGATCGTGGGCTTCAATTTCGACCTCAACGATATCCGC GACATCGAGGCAGTCGTCACTCCCATGACAATCTACCAATAACAACCCCG TGGCGGGTGACATGTCCGGAGGGCACATCATACCAGCCCGGATACCCTTC GAAAAGTGGCTTGTTCCCCCCTCTTCCCCCTCCCTCCCTTGTCCGTCGTG CTGTTTTTCGTCTTGACTTCAGTTTTTTCGGGCTACATATTAAAACAATT ATCTGGTGGCTTTTGTGTGTTTGTTTTGCACCCCAAAAACTGGATTTTAA CATGAACGTTGGATGTTTGCTGTTACATTTGTGTGCTGTACTAGAGCCTG GCAATAGCTGAGAGCACTCTGTTTATTTGTCTCTCGCTCACCATTGCGTT GTACTTTCGCCGATGGTTGGTGCACGAGTGCTAGAGCCCACGGCGGCTTC GCCGAGGTGTGTGCGGCAAATCGGCATTGGTTTATGATAAGCCTTGACGG AAGTGGAAGAGCCAGCGCAGTAGATGCCAGGACATTGCTGGCTGGCTCCC TCGCCTGTAGATACATACATACACCATTCCCTTGCTTTGATATTTGCCGG TTCGTCTAGAATTTTCTTTGTTGGCTCTTTGTGTAGTTTAAAACACGATG TCTTTTTCGTGCCACCATGTTGGCATTTCCAGTGGGTTGGTTATCTAGGA TTACAGATGCCGTTTTCTAGCTCAACTCTGAATGAAGCACGATGAAGCGA TGACAAGTGTACTCTAGCGGTATACTCCACCTCGACCTCTCTTTTTTTCC GCTCTTGTTCGTTCCGCGACAAGACAATCATTACATCGCAGAGAGTCGTA TGAAATCGGTGGGTGGTGGCGTGTTTTCACGGCATGCGTGTACTTCGGAG GTATGTAGGTGCATGTTTGTCTCTGGGCGTATGTATGTACACGGACTGTG TAGGGGGTTGCCTTCGTCGCGATCGGCTTGTCGGCGTTTGAGGCGCAAGC CGTCGTGATTGGCTTGTGGGCGTTTGAGTCGCAAGCCGGAGCTCGCGGTG TGTTCGGTTGGCTGCGCGTGTCAAAGACGCCGCTGGTTTTGATTGCCTAC AAGCGACGAAATCAGACCCACTGGAGCTTAGACGATACGTCACCCAGCCG GCTTATCTCCAGCTCAGCGAATACTGTAGTCGTGCTACTGCTGTGGCGAT AGAGAAGCCGCAAAAAGCGCACGCGTACGCGGGAAGCCTGCGCCTGCTAG CTCGGTGCATGCACTTCATCTCTAGTCGAGTTGTTCGAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1234:3595..13834-

>mRNA_L-elsbetiae_contig1234.1927.1 ID=mRNA_L-elsbetiae_contig1234.1927.1|Name=mRNA_L-elsbetiae_contig1234.1927.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4662bp|location=Sequence derived from alignment at L-elsbetiae_contig1234:3595..13834- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTCGGAAGGAGAACACGCGGGGCAGGGAGGCCGTGGCCAGGGAGAA
CGACGACGGTGACGGATCGGATTCGGATTCGGATAGCGCAAGCAGTGAGG
CTGTCAATGATTACGGCGGGTTCGAAACGACCTCCGAGACGAGCTCCAGG
TTTTCCGCAGATGCTTCGGAAGGAGAACACGCGGGGCAGGGAGGCCGTGG
CCAGGGAGAACGACGACGGTGACGGATCGGATTCGGATTCGGATAGCGCA
AGCAGTGAGGCTGTCAATGATTACGGCGGGTTCGAAACGACCTCCGAGAC
GAGCTCCAGGTTTTCCGCAGCAGCAGGAGTGCGCTTCAATTCCGAGCGGT
TCCTTGCGCTCGTCCACCCGGCAGCTTCTCCTGCAGGCGCCATACCCAGA
AAGGCGACCGGCAGCGGCCGCGTGACGGGGCATCGGCGGCCGAATCAGCA
CAAGCCCACGACGCTTGCGTTCGGCCCGGAAGGGGAGCGGGGGTACGACG
CTTTCAGCAGCAAGTCGCTCAACTCCCAGACCTCTGAAGGCATGGTGCTG
GGGTCGCCCATCAGCACCATCATTCGCCACCAAACCAGCAACGGGGGCTT
GACGTCGTCGTCATCGCCGCCGCCGCCGCCGCCGAAAGGACAAGGACGAG
GGGAAGACAGCAGCGCCGGCGGGCAAGCGGGGGCGGCGCCGGAGGTCTTC
CTGCCGTCAGCGGGGGCGGGCTACGATTCGTTCAGCAGCAAGTCGCTCCT
CTCAAACGGGTCGTGCAGCTCCATGTCGGAGCTGTCGATCCCGCCCTTCA
CCGCCAGGGGGTTGAGCGACGGCCGTGCTGGCCAGCGGGGCTTGGGTGGC
GGCCCGGGCGGTGACCCCGACGATGGCGACAGCGTTGGCAGTCACGTGGC
CCCGGACGGGTACAGCACCTTCAAACACTCGTCTCAGACTGGCATCGACG
CACGCGCACACCACCGGATGAAGTCGATTTCCTCTTCGACGAAGGGGGCG
TACGGAGGCGGCGGCGGCGGCAGCAGCAGCGCCGTCGCCACCGGGGAGCA
CCGGCAGCAGGTCTCGGCGGCGGGTACGTTCGGCGGGGCTGTAGACGTGT
CGTCGGTTGTAGAGGTTCCCGAAAACAAGGGCCAGCGGAGGACCTCGATG
GACAAGATTTGGCCGACTGCTGGTGGCAAGCGGAAGGAGCAGGCTTCTGC
GATAGTGGACAACGCAGACAGCGAAGACGACGACGCCGCTGACGTTAGTG
GAGGGTCCGGCTACGATGGCTTCAATCTGCAGCCAGCTGCAGCAGGAGTG
CGCTTCAATTCCGAGCGGTTCCTTGCGCTCGTCCACCCGGCAGCTTCTCC
TGCAGGCGCCATACCCAGAAAGGCGACCGGCAGCGGCCGCGTGACGGGGC
ATCGGCGGCCGAATCAGCACAAGCCCACGACGCTTGCGTTCGGCCCGGAA
GGGGAGCGGGGGTACGACGCTTTCAGCAGCAAGTCGCTCAACTCCCAGAC
CTCTGAAGGCATGGTGCTGGGGTCGCCCATCAGCACCATCATTCGCCACC
AAACCAGCAACGGGGGCTTGACGTCGTCGTCATCGCCGCCGCCGCCGCCG
CCGAAAGGACAAGGACGAGGGGAAGACAGCAGCGCCGGCGGGCAAGCGGG
GGCGGCGCCGGAGGTCTTCCTGCCGTCAGCGGGGGCGGGCTACGATTCGT
TCAGCAGCAAGTCGCTCCTCTCAAACGGGTCGTGCAGCTCCATGTCGGAG
CTGTCGATCCCGCCCTTCACCGCCAGGGGGTTGAGCGACGGCCGTGCTGG
CCAGCGGGGCTTGGGTGGCGGCCCGGGCGGTGACCCCGACGATGGCGACA
GCGTTGGCAGTCACGTGGCCCCGGACGGGTACAGCACCTTCAAACACTCG
TCTCAGACTGGCATCGACGCACGCGCACACCACCGGATGAAGTCGATTTC
CTCTTCGACGAAGGGGGCGTACGGAGGCGGCGGCGGCGGCAGCAGCAGCG
CCGTCGCCACCGGGGAGCACCGGCAGCAGGTCTCGGCGGCGGGTACGTTC
GGCGGGGCTGTAGACGTGTCGTCGGTTGTAGAGGTTCCCGAAAACAAGGG
CCAGCGGAGGACCTCGATGGACAAGATTTGGCCGACTGCTGGTGGCAAGC
GGAAGGAGCAGGCTTCTGCGATAGTGGACAACGCAGACAGCGAAGACGAC
GACGCCGCTGACGTTAGTGGAGGGTCCGGCTACGATGGCTTCAATCTGCA
GCCAGCTGGCTACGAGGACTTCAACGATCACGAGAATGACGGCGCCCTTG
TGCCTCCAAGGAGCCTTACCGAGGCCCCAGGCTATGACTCCTTCCAGGGA
TCCAAGGGATCCAGCAGGCTACGAGGACTTCAACGATCACGAGAATGACG
GCGCCCTTGTGCCTCCAAGGAGCCTTACCGAGGCCCCAGGCTATGACTCC
TTCCAGGGATCCAAGGGATCCAGCAGGTCGATCTCTAGCAGCATGCTCAG
CAGCAGCACCTTCGGGAGGCACGGCGAACGGCCGCCGGCGCCGCCGGCGC
CGCTGCCCGCGGTGTCGTCTCGCCCGGCCTCATCAGCACCACAGCAGTCC
GCGCCGCCTCAGGCTCACCCGCAATCCGAGCCACCGCTGGGGCGCGCCGC
CGCCGAGGCGCATAAGAGCGTGCCAATCGCGAAAAGGACGAACGGCTTCT
CTGTTCGGCCTGCGAACGGGGACGGCGAGAGGGTGGACGGGTACCGCGGA
GCGGGCCGCGAGAAGCCGCCACCCCTGAGCCCGGACGCGCTGACGGCCTT
CTCGAACGGGGACCCAGAAGCCAAGGACAGGAACAGGTCGATCTCTAGCA
GCATGCTCAGCAGCAGCACCTTCGGGAGGCACGGCGAACGGCCGCCGGCG
CCGCCGGCGCCGCTGCCCGCGGTGTCGTCTCGCCCGGCCTCATCAGCACC
ACAGCAGTCCGCGCCGCCTCAGGCTCACCCGCAATCCGAGCCACCGCTGG
GGCGCGCCGCCGCCGAGGCGCATAAGAGCGTGCCAATCGCGAAAAGGACG
AACGGCTTCTCTGTTCGGCCTGCGAACGGGGACGGCGAGAGGGTGGACGG
GTACCGCGGAGCGGGCCGCGAGAAGCCGCCACCCCTGAGCCCGGACGCGC
TGACGGCCTTCTCGAACGGGGACCCAGAAGCCAAGGACAGGAACAGGGAT
GTGACGGAAGCCACGCAGTTCCTGCTCACCGTCTTGGTGCCGGCCACCGC
CAGGCTTCTGTGCGCCAAGTCACCGCAAGAACTCTCCGAGGGATGTGACG
GAAGCCACGCAGTTCCTGCTCACCGTCTTGGTGCCGGCCACCGCCAGGCT
TCTGTGCGCCAAGTCACCGCAAGAACTCTCCGAGATCAACCTGTCGCAGA
AGCTCCACGAATACGGGGTAAACATGCGCCACATCGGGCTCCTCCGGGCC
TACGTAACTCCGCCAAGTCGCGGGTCTTCTTCAACACCTTCTGCTTCTAA
CCCTGCTTCTGGTTCTTCTTCTTCCCTCGCCGTGGCGCGTAGAACCGGCA
ATACCAGCGCGGGTATCATGAGAGACCGTGCTTTGATCAACCTGTCGCAG
AAGCTCCACGAATACGGGGTAAACATGCGCCACATCGGGCTCCTCCGGGC
CTACGTAACTCCGCCAAGTCGCGGGTCTTCTTCAACACCTTCTGCTTCTA
ACCCTGCTTCTGGTTCTTCTTCTTCCCTCGCCGTGGCGCGTAGAACCGGC
AATACCAGCGCGGGTATCATGAGAGACCGTGCTTTGGTGGAAGTCGTGGT
GCGAACTCTGAAGTTGGTCCTGAGAGGGTTCCAGCGGCGCTGGATGAAGT
CGGAGCAGAGCTCCTCCGAGCAGGTGGAAGTCGTGGTGCGAACTCTGAAG
TTGGTCCTGAGAGGGTTCCAGCGGCGCTGGATGAAGTCGGAGCAGAGCTC
CTCCGAGCAGGGGATGCACCTGTTGGTAACGCAGTTCCTAAACCTTGTGA
CCGGGAGCCACAAGCGGTCCAAAATCTTCTGGGAGGAGAACGTCACCACC
GGCGTCTGCCAAAGGGGATGCACCTGTTGGTAACGCAGTTCCTAAACCTT
GTGACCGGGAGCCACAAGCGGTCCAAAATCTTCTGGGAGGAGAACGTCAC
CACCGGCGTCTGCCAAAGGTTCGGCACGGTAGCCCTGACCGAATCGGAAC
GCGCGGGACTGTGGACGGTTTGCTCCGACCGGACGGACCTTCTCCTCACC
ATCGTCAAGGAGCTGGTCAAGGTCACCGGCGTAAGGTTCGGCACGGTAGC
CCTGACCGAATCGGAACGCGCGGGACTGTGGACGGTTTGCTCCGACCGGA
CGGACCTTCTCCTCACCATCGTCAAGGAGCTGGTCAAGGTCACCGGCGTA
AGGTTTAAGGAGAGCGTCAACCAGAAGCTGCGCAGTAAGACAGCCAAGTC
TAAGATCGTGGGCTTCAATTTCGACCTCAACGATATCCGCGACATCGAGG
CAGTCGTCACTCCCATGACAATCTACCAATAAGTTTAAGGAGAGCGTCAA
CCAGAAGCTGCGCAGTAAGACAGCCAAGTCTAAGATCGTGGGCTTCAATT
TCGACCTCAACGATATCCGCGACATCGAGGCAGTCGTCACTCCCATGACA
ATCTACCAATAA
back to top