mRNA_L-elsbetiae_contig1233.1921.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: D8LU67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU67_ECTSI) HSP 1 Score: 371 bits (953), Expect = 3.510e-122 Identity = 218/365 (59.73%), Postives = 253/365 (69.32%), Query Frame = 2 Query: 149 TGTNAESSTIGGSICAERAAMCKLREASDCRRVTKVVVVTDNPGPLAPGVLCREFLSAHLPPSTPVIMAGAGSGCDTPGGLLYDEELDQKPPPEVAVPSGPSSTCDRRAAXXXXXXXXXXXXXXXXXXXXXXXXXPTSVQQPSPGHDTPGSLTVTACXXXXXXXXXEGDP------EVEGGVADEEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDGAVVVVKAKDLV 1225 TGTNAE+STIG SICAERAAMCKLRE S+C+RVTKVVVVTD+ PLAPGVLCREFLSAHL PSTPVIM+G+G PGGLLY EE + KP P+ A G ++ A P + G TP + XXXXXXXXX V+ G +E +DV TVG LYPW+NMYG+T R E L+LGFL QQ AEEL+ P LAE +GL+SGVVEA+DAAWRATA D +D +HPIRYAAV LF DGEAEI HQ+KA EYGA+LDPVTLLAPAM+RRAKDG+R SW+++ DQFG +HAPFAQARTFLSEHGF ETKVA+H G VVV+KAK L+ Sbjct: 5 TGTNAEASTIGSSICAERAAMCKLREESNCKRVTKVVVVTDHQHPLAPGVLCREFLSAHLCPSTPVIMSGSGEAI-VPGGLLY-EEPNLKPSPDSAKNGGGATGSGALVAGEAAVDTCGCEAA------------PPAGDGRHAGAATPAAAXXXXXXXXXXXXXXXXXXXXXXXXRVQSG-GNEGAAPAPVDVSTVGQLYPWKNMYGVTERGEQLKLGFLAQQKAEELSDPNLAERVGLESGVVEAYDAAWRATAGDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGASLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEAGGGVVVIKAKALL 354
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A6H5KDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ5_9PHAE) HSP 1 Score: 367 bits (943), Expect = 1.170e-120 Identity = 210/371 (56.60%), Postives = 238/371 (64.15%), Query Frame = 2 Query: 149 TGTNAESSTIGGSICAERAAMCKLREASDCRRVTKVVVVTDNPGPLAP---------------GVLCREFLSAHLPPSTPVIMAGAGSGCDTPGGLLYDEELDQKPPPEVAVPSGPSSTCDRRAAXXXXXXXXXXXXXXXXXXXXXXXXXPTSVQQPSPGHDTPGSLTVTACXXXXXXXXXEGDPEVEGGVADEEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDGAVVVVKAK 1216 TGTNAESSTIG SICAERAAMCKLRE S+C+RVTKVVVVTD PLAP GVLCREFLSAHL PSTPV+M+G+G PGGLLY EE + KP P+ A G ++ A PSP S T G GG + MDV TVG+LYPWRNMYG+T R L+LGFL QQ AEEL+ P LAE +GL+ GVVEA+DAAWRATA D +D +HPIRYAAV LF DGEAEI HQ+KA EYGATLDPVTLLAPAM+RRAKDG+R SW+++ DQFG +HAPFAQARTFLSEHGF ETKVA+H G VVV+KAK Sbjct: 5 TGTNAESSTIGSSICAERAAMCKLREESNCKRVTKVVVVTDYQHPLAPDTLERFRFVLFCVTQGVLCREFLSAHLRPSTPVVMSGSGEAI-IPGGLLY-EESNLKPWPDSAKTGGGATGSGALVAGEAAVDTCGCETAPPAGDGKHAGAATPPAASPSPY-----SSCDTRILAASVERGEGGGRAQSGGSEGAKAAPLRMDVSTVGELYPWRNMYGVTERGGQLKLGFLVQQKAEELSDPNLAERVGLERGVVEAYDAAWRATAGDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEAGGGVVVIKAK 368
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A835ZD32_9STRA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD32_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.720e-60 Identity = 153/405 (37.78%), Postives = 185/405 (45.68%), Query Frame = 2 Query: 38 VAAAHELRRSLTPPHQSLFRVVCILVYEDSAGKLHQITGTNAESSTIGGSICAERAAMCKLREASDCRRVTKVVVVTDNPGPLAPGVLCREFLSAHLPPSTPVIMAGAGSGCDTPGGLLYDEELDQKPPPEVAVPSGPSSTCDRRAAXXXXXXXXXXXXXXXXXXXXXXXXXPTSVQQPSPGHDTPGSLTVTACXXXXXXXXXEGDPEVEGGVADEEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLA-EALGLDSGVVE--------------------------------------AHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAML-RRAKDGVRPSWIIVCDQFGLMHAPFAQAR 1132 V AH LRRSL PPHQS FRVVC++ YED G H +TGTNAE IGGSICAERAA+CKLREA RV V VVTD PL P VLCREFL+ HL P VIM+GA L + PSS DR G T ADE+ ++ C +GDLYP+ +YG+T R+ LLR GF + A P A + LGL + V A++ A R TA D +D +HP+RYAAV ++ DG + AHQ+KA EYG+TLDPV+ L ML R+ DGVR + I+ DQFG HAPFA AR Sbjct: 29 VTMAHRLRRSLEPPHQSRFRVVCVIEYEDDGGATHVVTGTNAEPGYIGGSICAERAALCKLREAPFVARVASVTVVTDADAPLCPSVLCREFLATHLDPDVTVIMSGASXXXXXXXXXL----------------TSPSSCLDR------------------------------------------GMKT-----------------------ADEDS----VETCRIGDLYPFPCIYGVTDREALLRHGF---EFARRADAPETAIKTLGLSAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLLSLAYELAQRETARDAKDALHPLRYAAVVVYEDGTSAAAHQLKAAEYGSTLDPVSQLLRGMLDRKLDDGVRATHIV--DQFGNCHAPFAPAR 343
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S4T622_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T622_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.180e-26 Identity = 126/479 (26.30%), Postives = 187/479 (39.04%), Query Frame = 2 Query: 47 AHELRRSLT-PPHQSLFRVVCILVYEDSA--------------------------------GKLHQ------ITGTNAESSTIGGSICAERAAMCKLREASDCRRVTKVVVVTDNPGPLAPGVLCREFLSAH--LPPSTPVIMAGAGSG-------CDTPGGLLYDEELDQKPPPEVAVPSGPS------STCDRRAAXXXXXXXXXXXXXXXXXXXXXXXXXP--TSVQQPSPGHDTPGSLTVTACXXXXXXXXXEGDPEVEGGVADEEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRA-----------KDG-----VRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHA---------------EDGAVVVVKAKDL 1222 AH R L P QS FRVV ++ YE + G +H+ + GTN E I GSICAERAA+ +LR RVTK+V+VTD+P ++PG+LCREF+ +H + TP+++ G G P + DEE ++PP + S C + T+++ P TVT + T L P ++ Y + +++V +A P +A ++ + A +A+ D R +HP++Y + LF DG + Q KALEYG TLD V LA + +R KD +RP I+ DQ+G+ HAPFA AR +LSEHG+ V +H+ EDG+ +VV+ +L Sbjct: 21 AHRYRLILANAPRQSGFRVVALVFYETNGKERGGGEPSSSLSPIVSIQTKHLAKQWAHHHVGGIHEYGNRKFVVGTNDEPHAISGSICAERAALVQLRFLPQVSRVTKIVIVTDSPSEISPGLLCREFMVSHPKISLDTPIVLGGGICGKCGMNICAPQPATSVQDEEGKRQPPQMDGKKTDDLAEQLLLSCCSHATSLSDLANGVTIQSEDHATFAPMHDFTRVRTTIRMLYPHPSVYARFTVTEAVHFGKE---------------------YASKSTSLSLKP-QSSYVFDDQSIDSSNEEEKKKVEVTIADPKIA---------LQLLNLAIQASEFDNRTDLHPLQYGSSVLFSDGSIATSFQKKALEYGCTLDAVGQLAYIIEKRCNIMTDDNERECKDKQKHKMIRPVLIVQADQYGIAHAPFAPARAYLSEHGYTNCYVLVHSRYCTTKSDDDDVEKEEDGSCIVVENDEL 468
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S3ADN8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADN8_9EUKA) HSP 1 Score: 114 bits (286), Expect = 7.560e-26 Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 2 Query: 710 VCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDGAVVVVKAKDLVPR 1231 V T+G+L+P+ + Y R E L G + L +P ++ LG DS A A+ A A D R+ VHP+R+ A +F GE A QVKALEYG ++DPV LAP + AK +P+ + + DQFG+ HAPFA R +L EHG+ ++ +H G + A DL+P+ Sbjct: 35 VRTLGELWPYASPYTRLSRAEQLACG----ERLGPLVRPQMSSLLGDDSSCWRA---AFEAAAADDRNDVHPVRFGAAVVFEGGEVAWAWQVKALEYGCSMDPVCQLAPLI---AKATRKPTVVCMVDQFGVAHAPFATGRAYLIEHGWGTVRLLVHTAAGLLQRPTADDLMPQ 198
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S1D5L8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5L8_CYCTE) HSP 1 Score: 105 bits (263), Expect = 4.500e-22 Identity = 101/359 (28.13%), Postives = 140/359 (39.00%), Query Frame = 2 Query: 179 GGSICAERAAMCKLREASDCRRVTKVVVVTDNPGPLAPGVLCREFLSAHLPPSTPV-IMAGAGSGCDTPGGLLYDEELDQKPPPEVAVPSGPSSTCDRRAAXXXXXXXXXXXXXXXXXXXXXXXXXPTSVQQPSPGHDTPGSLTVTACXXXXXXXXXEGDPEVEGGVADEEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGV--HPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDGAVV-----VVKAKDLVPR 1231 G SICAERAA+ +LR D VTK+V+VTD P +APG+LCREF+S+ S V I+ G + C P D E D P S G+D S++ T+ LYP+ +++ Q+ L +G + E H A ++ D V HPI Y A LF D A+QVK LEYG +LD V LA + + G+ P ++ DQFG+ HAPFA AR+FL E G+ + +V +H + A V+A DL P+ Sbjct: 1 GNSICAERAALTQLRWIPDAV-VTKIVIVTDAPHAVAPGMLCREFMSSQPQISLDVPIVLGGTTCCPDP-----DNENDIDPM--------------------------------------------------SDGYDYVESIS------------------------------------TLKQLYPFPSLFMRKSLQDCLMMGAKWKDACMSS----------------ETHLMKLARLAAERDDSVELHPISYGAAVLFRDKSYATANQVKGLEYGCSLDAVCQLASILRLKRSKGILPLQLVQVDQFGIAHAPFAPARSFLIEQGYGDVQVLIHTWNNATEGIQWHTVRAHDLAPK 251
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S1I1R9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I1R9_9EUGL) HSP 1 Score: 103 bits (258), Expect = 2.190e-21 Identity = 69/178 (38.76%), Postives = 98/178 (55.06%), Query Frame = 2 Query: 710 VCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAK----DGVR-PSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDGAVVVVKAKDLVP 1228 T+ +L+P ++Y R +++ AEEL+ +A+G D + + AA +AT+ D +D +HPIRYAA LF D E+A Q KA+EYG T+D VT L + AK D R P ++ DQFG++HAPFAQ R LSE+GF +H DG + + DLVP Sbjct: 91 TATLEELHPCASLYAKVPRDKVVSF-------AEELSGR-CTKAVGKDRWN-KVYLAALQATSHDNKDELHPIRYAAAVLFDDDTYEVAWQDKAVEYGNTIDAVTKLFHLIQSVAKWVPADSARAPQVLMHVDQFGILHAPFAQPRALLSENGFGSIVCPVHRMDGTLGTITIADLVP 259
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A0L0DEZ7_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DEZ7_THETB) HSP 1 Score: 101 bits (252), Expect = 1.100e-19 Identity = 73/214 (34.11%), Postives = 99/214 (46.26%), Query Frame = 2 Query: 683 EEPKGGHMDVCTVGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDS------------------GVVEAHD------------AAWRATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAE--DGAVVVVKAKDLVP 1228 E P +++ TVG+LYP+ +Y R E+L + P A +L +DS G V A A TA D RD +HPIRYAA LF DG + KALEYGAT++PV +A A+ G + + V DQ+G++H PFA +R FL E + V +H DGA+VV A DL+P Sbjct: 136 EGPVPCEINITTVGELYPFPPVYRCISRYEVLNAA----EALSAAVAPWWAGSLSVDSDDSXXXXXSDAQGIEARLGSVAAASGVATSDVYRMLKAIHAETARDNRDILHPIRYAAGALFDDGSIVTGCETKALEYGATINPVIKIAKALEDAHDAGRKVLLLAVMDQYGVLHGPFADSRAFLHEGPWGAVPVVVHNSEGDGALVVTAASDLIP 345
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S4QQ05_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QQ05_9DINO) HSP 1 Score: 95.1 bits (235), Expect = 7.250e-18 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 890 ATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLRRAKDGVRPS-WIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDG 1192 A ++ + V P+ +AA +F DG A ++K +EYG T+D V+LL P MLR +D PS +I+ D FGL HAPFA AR+ L EHGF + KV H +DG Sbjct: 201 ARRQEAQAAVFPVLFAAAVVFGDGRVHSAAELKGIEYGCTVDAVSLLLPEMLRSREDVDMPSVFIVQADNFGLAHAPFAAARSLLMEHGFGDVKVCAHTDDG 302
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Match: A0A7S1F9K1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F9K1_NOCSC) HSP 1 Score: 95.1 bits (235), Expect = 7.360e-18 Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 719 VGDLYPWRNMYGITGRQELLRLGFLRQQVAEELAKPGLAEALGLDSGVVEAHDAAW-RATAEDKRDGVHPIRYAAVCLFPDGEAEIAHQVKALEYGATLDPVTLLAPAMLR-RAKDGVRPSWIIVCDQFGLMHAPFAQARTFLSEHGFEETKVALHAEDG 1192 + +L P ++Y R +L G + ++ ++A P LD + A+ AA A + ++ V P+ +AA F DG ++K +EYG T+D V+LL P MLR R + G P I+ DQ+G+ HAPFA AR+ L+EHGF + V+ H EDG Sbjct: 154 LAELLPLPSVYCGLCRDTMLSRG---EALSTKVAVP-------LDEHLASAYRAAVAHAKRQQRQSVVFPLLFAAAVRFEDGRLHTVAELKGIEYGCTVDAVSLLMPEMLRCREEGGASPVCIVQADQYGVAHAPFAAARSLLAEHGFGDVLVSAHGEDG 303 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1233.1921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1233.1921.1 >prot_L-elsbetiae_contig1233.1921.1 ID=prot_L-elsbetiae_contig1233.1921.1|Name=mRNA_L-elsbetiae_contig1233.1921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp MCKLREASDCRRVTKVVVVTDNPGPLAPGVLCREFLSAHLPPSTPVIMAGback to top mRNA from alignment at L-elsbetiae_contig1233:13761..24644- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1233.1921.1 ID=mRNA_L-elsbetiae_contig1233.1921.1|Name=mRNA_L-elsbetiae_contig1233.1921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10884bp|location=Sequence derived from alignment at L-elsbetiae_contig1233:13761..24644- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1233:13761..24644- >mRNA_L-elsbetiae_contig1233.1921.1 ID=mRNA_L-elsbetiae_contig1233.1921.1|Name=mRNA_L-elsbetiae_contig1233.1921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig1233:13761..24644- (Laminarionema elsbetiae ELsaHSoW15)back to top |