mRNA_L-elsbetiae_contig12327.1920.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A1E7FTR4_9STRA (VWFA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTR4_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.900e-25 Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGG-GTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQNIGVEVIAFGDDANMIALGLIANAGRT--TVTAAAAGGLTNVFVNIARGASAASQELYEEICKRIAEEVSTQLMLEYL 528 YN F+ R Q D VS+VQFD GARVTCQ I +AP L GG TCF A + A + +K +S + ++FMSDG A D+ AA T +++ N+ + VI FG + L IA A TA+ G L+ VFV IA G ++ L EI KRI+E V+ +L EYL Sbjct: 12 YNKFMQSRRQRQRDSDLVSVVQFDGGARVTCQLQNIVNAPAELGYSGGCSTCFLPAALLACDLTQKTPSSHTPVIIFMSDGCAGDSIAAANTFAAL----NNVELHVIGFGGGTDTSQLQQIARASANGKVHTASDIGSLSKVFVQIATGGDDVAKVLEAEIGKRISEAVTNRLSAEYL 186
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A448ZCC6_9STRA (Chloroplast protein-transporting ATPase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCC6_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.220e-23 Identity = 75/182 (41.21%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQN----IGVEVIAF--GDDANMIALGLIANAGRTTVTAAAAGGLTNVFVNIARGASAASQELYEEICKRIAEEVSTQLMLEYL 528 YN +L+ R Q D+VS+VQFD+GARV C+ I AP NL M GGT FA A A V RK S + ++F+SDG A D+ +AA ++ E +N I + VI F G D++ + A+A TA LT VFV IA G + AS L EEI KRI++ V+ ++ EYL Sbjct: 3088 YNKYLENRRRRQHHLDSVSVVQFDNGARVICELENIADAPVNLCMSAGGTKFAPAAELAYAVARKTPPSHTPVIIFISDGCADDSEQAASFFETLNQEMKNRYGDIELHVIGFRGGTDSSQLQKISRASANGRVHTADDIDSLTKVFVQIASGDAVASA-LEEEIGKRISDAVTDRISAEYL 3268
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A7S4MJS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MJS1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.900e-22 Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQNIG-----VEVIAFGDDANMIALGLIANA---GRTTVTAAAAGGLTNVFVNIARGASAASQELYEEICKRIAEEVSTQLML 519 YN + +R +Q D VS++QFD A VT + I AP L +GGGTCF+ A A++V A+ + +VFMSDG A DA +AA T S + N Q + + VIAFG A+ L +IA + G+ V+A A L+++FV IA G + L EI KRI+E VS +L L Sbjct: 78 YNKCIAQRRQNQNESDLVSVIQFDGCATVTVSMTAISQAPSQLGFRGGGTCFSPAAEHARQVAMSCPATHAPLVVFMSDGCAGDASQAANTFSQLNNHIQGMSGNELELHVIAFGGGASTSQLQMIAGSSHNGKLHVSADTAQ-LSDIFVEIAGGGNV-GDVLEAEIGKRISEAVSDKLAL 256
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A0D2MDD5_9CHLO (VWFA domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MDD5_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 4.920e-20 Identity = 70/180 (38.89%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGE--AFDAHEAAGTLSSIVNERQNIGVEVIAFGDDANMIALGLIANAGRTTVTAAAAGGLT--NVFVNIARGASAASQELYEEICKRIAEEVSTQLMLEYL 528 Y L RR +DQ + D VS+V F V +PID+AP +L GGGTCFA A+ + QR+L A + L+FMSDGE + A +A L S + N+ V IAFG ++ + A AG AAAGGL VFV IA SA L E +++ E +S ++M++YL Sbjct: 625 YGQLLARRRSDQNQGDVVSVVTFCSSPHVAAAVTPIDAAPSSLPYSGGGTCFAPALAECQRLLEAAPARYTPVLIFMSDGEDCSSGATQAVQQLCSRLR-MCNLQVHTIAFGSGIKLLE-DMAAAAGSAGQYHAAAGGLQLQQVFVQIAAECSAVDG-LVREFAQKLTEMISVKIMVDYL 801
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A7S2E4I8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E4I8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.630e-17 Identity = 66/177 (37.29%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQN-------IGVEVIAFGDDANMIALGLIANAGRTTV--TAAAAGGLTNVFVNIARGASAASQELYEEICKRIAEEVS 504 YNG++ R +Q D VS+VQFD A VT + I + P L GGGT F A +A + ++ + +VFMSDGEA DA+EAA S + N Q + + VIAFG A+ L IA++ R +A L+N+FV IA + L EI KRI++ VS Sbjct: 432 YNGYITRLRQNQRYSDLVSVVQFDSAAMVTVEKKSISNVPSALGFSGGGTSFLPAAARACALAMSTPSTHTPSIVFMSDGEAGDANEAATRFSQLNNSFQGHIANANELDLNVIAFGSGASHEQLKKIASSSRNGKFQMSADTAELSNIFVQIADKGQVVNL-LEAEIGKRISDAVS 607
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A815I2P8_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815I2P8_9BILA) HSP 1 Score: 79.3 bits (194), Expect = 5.850e-14 Identity = 62/184 (33.70%), Postives = 94/184 (51.09%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQNIG-----VEVIAFGDD--ANMIALGLIANAGRTTVTAAAAG-GLTNVFVNIARGASAASQELYEEICKRIAEEVSTQLMLEYL 528 Y FL+ R +DQG D S+VQF AR Q + AP+NL+MKGGGT + + A VL KD + S ++FMSDGE D + L+ I + QN G +AFG + + L +A AG + A G L+ VF IA + + L + +++++S ++M++YL Sbjct: 4244 YVNFLNTRESDQGGDDIFSVVQFASTARPIYQGCKLAQAPRNLTMKGGGTTYIAGLKIADDVLTKDTTNSSIVMIFMSDGED-DNSQPLPKLTEIRKKYQNSGRRNFVCHTVAFGANVGSGRQLLQEMATAGNGQLFDARDGIQLSQVFTQIAADCNV-TNTLVNRFAEILSKDISLKIMVDYL 4425
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A820IIF9_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820IIF9_9BILA) HSP 1 Score: 75.5 bits (184), Expect = 1.100e-13 Identity = 42/114 (36.84%), Postives = 59/114 (51.75%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNER----QNIGVEVIAFG 330 YN FL RR DQG D +++VQFD A C + SAP+ LS+ GGGT +A + +A + + D S ++FMSDG A D E+ + S + + N I FG Sbjct: 71 YNNFLTRRHDDQGGDDLITVVQFDSSAHTICSRQKVASAPRTLSIHGGGTNYAKGLKEATKEIENDKTKASIVMIFMSDG-ADDGSESPENIISQLKSKYTKDHNFIFHTIGFG 183
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A818VLT5_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818VLT5_9BILA) HSP 1 Score: 73.9 bits (180), Expect = 4.370e-12 Identity = 46/115 (40.00%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 1 YNGFLDRRMTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQAQRVLRKDHASRSAQLVFMSDGEAFDAHEAAGTLSSIVNERQNIG-----VEVIAFG 330 Y FL+ R +DQG D S+VQF AR Q + AP+NL+MKGGGT + + A VL KD + S ++FMSDGE D + L+ I + QN G +AFG Sbjct: 8539 YVNFLNTRESDQGGDDIFSVVQFASTARPIYQGCKLAQAPRNLTMKGGGTTYIAGLKIADDVLTKDTTNSSIVMIFMSDGED-DNSQPLPKLTEIRKKYQNSGRRNFVCHTVAFG 8652
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Match: A0A820NC86_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A820NC86_9BILA) HSP 1 Score: 51.2 bits (121), Expect = 2.790e-5 Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 1 Query: 1 YNGFLDRRM--TDQGRHDTVSIVQFDHGARVTCQASPIDSA-PKNLSMKGGGTCFAGAMVQA 177 YN L++R+ Q D +SIVQFDH ARV C ASP+ + P+ M GG T F+ A+ +A Sbjct: 50 YNMCLEKRLEIAQQLSKDFISIVQFDHDARVICSASPLSNGIPRLAHMTGGATSFSPALQKA 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12327.1920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12327.1920.1 >prot_L-elsbetiae_contig12327.1920.1 ID=prot_L-elsbetiae_contig12327.1920.1|Name=mRNA_L-elsbetiae_contig12327.1920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp MTDQGRHDTVSIVQFDHGARVTCQASPIDSAPKNLSMKGGGTCFAGAMVQback to top mRNA from alignment at L-elsbetiae_contig12327:1570..2100+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12327.1920.1 ID=mRNA_L-elsbetiae_contig12327.1920.1|Name=mRNA_L-elsbetiae_contig12327.1920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=531bp|location=Sequence derived from alignment at L-elsbetiae_contig12327:1570..2100+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12327:1570..2100+ >mRNA_L-elsbetiae_contig12327.1920.1 ID=mRNA_L-elsbetiae_contig12327.1920.1|Name=mRNA_L-elsbetiae_contig12327.1920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig12327:1570..2100+ (Laminarionema elsbetiae ELsaHSoW15)back to top |