mRNA_L-elsbetiae_contig1232.1916.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1232.1916.1
Unique NamemRNA_L-elsbetiae_contig1232.1916.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: D7G1A1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A1_ECTSI)

HSP 1 Score: 857 bits (2214), Expect = 1.030e-310
Identity = 413/486 (84.98%), Postives = 438/486 (90.12%), Query Frame = 1
Query:    1 GHAAAVFKSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADIVQDASGSWSLVWEEMASGNNVPFSPRAGLAAAVIQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWEASNTQGEKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTSEGIVCGGVGTCVDFGCECDGTGEGAAAGGDFCTADQTDSESAGIKTVILDKSLVAAVTAVATAVSAALVVGTPWSPLLSSGQIR 1458
            GHAAAVFK +LWVVGGRGELYQTYNLRFQNRRGDVWSS DGQ W+QS++LTGDF LQNFDA+DPG+LAPWYARFGHTLDVLQATN SGV+TELMVLAGGYTPDP NDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWA DIVQDASG WS  WE+MASGN+VPFSPRAGLAAAV+QRPLVQS FNDTLF+MGGFGGWP+DDPRYNGMRCRNDVYKTKDG +WSVV+ESADWG RGWFDV TL+KVSDPY+DVTPSS  RTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWH VNYEEGST  SNL+SSM+WALTEVDN PTYLGKWGHRMLAW A    G KEPALYLIAGDAVEGGSFVSDVFVSTETLFCT+EGIVCGG+GTCVDFGC+C+GT +G  AGGDFCTADQTDSESAG K V    SLV A+T VA AV   L VGT  S L SS  +R
Sbjct:   21 GHAAAVFKDRLWVVGGRGELYQTYNLRFQNRRGDVWSSPDGQTWMQSNELTGDFQLQNFDAVDPGALAPWYARFGHTLDVLQATNHSGVSTELMVLAGGYTPDPDNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAGDIVQDASGFWSFAWEKMASGNDVPFSPRAGLAAAVVQRPLVQSEFNDTLFLMGGFGGWPEDDPRYNGMRCRNDVYKTKDGVAWSVVTESADWGPRGWFDVATLTKVSDPYADVTPSSEFRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHQVNYEEGST-GSNLYSSMEWALTEVDNIPTYLGKWGHRMLAWTADGENGVKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTAEGIVCGGIGTCVDFGCDCEGTSQGTGAGGDFCTADQTDSESAGAKNVPRGVSLVVAITTVAAAV---LAVGTS-SSLSSSWPVR 501          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A836CQ57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ57_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 1.950e-130
Identity = 201/470 (42.77%), Postives = 277/470 (58.94%), Query Frame = 1
Query:   13 AVFKSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNFDALDPGSLAPWYARFGHTLDVLQ-------------------------ATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESS------------------------VFL-------DRLFIIGGSPLTNDVWAAD-IVQDASGSWSLVWEEMASGNNVPFSPRAGLAAAVIQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWE----ASNTQGEKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTSEGIVCGGVGTC 1239
            AVF+ +LW+ GGR E YQ YNL +  RRGDVWSS DG+ W Q  KL GDF++QN+DALDPG LAPW+ARFGHTLD ++                         AT+  G   E+++  GGYTP+P+ND W++ DG  W+FAG+A W+ R WH ++                        +F+       ++L ++GG+PL NDVW  + +VQ  +G W L W  +      P+SPR GL  +V++R         T+FV GG+ GWP+   +++G R RND++ + DG SW++V+ SA W  R W  +VT S+  D  +DV  S+ + T TG   RMWL GGGY+G  GN++V  MI   DMW+S++G  W+ VNYEEGS    N +SSM+W LTE +    +LG+WGH+M+AW     A++    + PALYLIAGD    G+  +DVFVS  TL C+  GIVCG  G C
Sbjct:   35 AVFRDRLWLTGGRSEAYQEYNLEYSQRRGDVWSSPDGRVWEQQTKLQGDFYVQNYDALDPGPLAPWWARFGHTLDTVRKXXXXXXXXXXXXXXXXXXXXXXXHATDMRGTEIEVLIQLGGYTPNPNNDQWLSIDGTVWKFAGHAPWSPRAWHATTKLNXXXXXXXXXXXXXXXXXXHVPMFMLCWDALEEKLLVLGGTPLVNDVWQLESVVQAPTGLWQLTWTPLTLA--APWSPRVGLGVSVLERSN-----GSTVFVTGGYAGWPRGSIQWDGERSRNDIWSSIDGRSWTLVASSAPWPPRAWHTLVTWSR--DGTADVVVSAANTTITGTKSRMWLTGGGYIGTKGNNVVYKMISLTDMWWSSNGYNWYKVNYEEGSG--DNAYSSMEWTLTEAEGKSVHLGRWGHQMVAWNDTVVAADGTTTQVPALYLIAGDTSGEGALANDVFVSNYTLLCSMGGIVCGNAGVC 493          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A6H5KCC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC5_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 6.800e-120
Identity = 170/192 (88.54%), Postives = 176/192 (91.67%), Query Frame = 1
Query:  619 MGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHV-NYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWEASNTQGEKEPALYLIAGDAVEGGSFVSDVFVSTET 1191
            MGGFGGWP+DDPRYNGMRCRNDVYKTKDG +WSVV+ESADWG RGWFDV TL+KVSDPYSDVTPSS SRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWH V NYEEGST  SNL+SSM+WALTEVDN PTYLGKWGHRMLAW A    G KEPALYLI GDAVEGGSFVSDVFVSTET
Sbjct:    1 MGGFGGWPEDDPRYNGMRCRNDVYKTKDGVAWSVVTESADWGPRGWFDVATLTKVSDPYSDVTPSSQSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHQVVNYEEGST-GSNLYSSMEWALTEVDNIPTYLGKWGHRMLAWTADGDDGVKEPALYLIGGDAVEGGSFVSDVFVSTET 191          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: F0Y1U9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1U9_AURAN)

HSP 1 Score: 298 bits (763), Expect = 6.940e-89
Identity = 182/484 (37.60%), Postives = 257/484 (53.10%), Query Frame = 1
Query:    1 GHAAAVF----KSQLWVVGGRGELYQTYNLRFQNRRGDVWSSS-DGQNWLQSDKLTGDFHLQNFDA------LDPGSLAPWYARFGHTLDVLQATNFSGVATELM------VLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADI-----VQDASGS---WSLVWEEMASG-------------NNVPFSPRAGLAAAVIQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSS--PSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLA-WE---------------------------ASNTQGEKE-----PALYLIAGD-AVEGGSFVS---DVFVSTETLFCTSEGIVC 1221
            GHA+ VF    +  LWVVGGRG  Y+ +N    +RR DVW    + Q WL+ + L GDF  +  +A      LDPG +AP++ RFGH+LDV  A N S    E+M      VL GG+TP P NDVW+++DG  W   G A WTGRG+H ++VF  RL+++GGSPLTNDVWA D      V+  +G    W + WE MA G             ++  +SPRAG  A V           +TL++ GG   WP+  P  +G R  NDV+KT+DGA+W+ V  +A W AR W  ++T + ++D Y+DV+ ++  P++      PR+WLAGGGY+G+ GNS+V  +  Y D+W+S DG TW  V   EG+     L SS++    + +N   Y+GK+ H M+  W+                           A + +G +      PALY I GD     G  +S   DV+VS   + C  +G  C
Sbjct:   63 GHASVVFPYNDRLALWVVGGRGIAYEKWNFEVTHRRADVWVYIVEDQRWLKMENLEGDFFARTDEAFLMEDVLDPGDVAPFWERFGHSLDVFPALNVSATTGEVMGKINAMVLLGGFTPRPDNDVWMSKDGIRWFRVGYAPWTGRGYHATAVFRGRLYVMGGSPLTNDVWAGDFNTTGSVETPAGRRDVWRMSWEAMAPGTGSFEAPETWSILDDARWSPRAGHGATVQFSIRTNESRGETLYLTGGLASWPEGHPLEDGYRGTNDVWKTEDGANWTRVVRAAPWAARAWHSLITWTDLTDVYADVSLAARQPNQNEPA-APRIWLAGGGYVGKKGNSVVEFVDAYYDLWWSRDGATWTQVGSSEGAG--DYLCSSLEVFKLDENN---YVGKYSHTMVPFWQIIPDAQVCETVQYNQYGFISGCDALRGADSAEGPRTNRIVVPALYFIGGDPGYLNGQKLSPSKDVYVSRAPVLCEVDGHKC 540          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A7S2KEU6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEU6_9STRA)

HSP 1 Score: 293 bits (749), Expect = 3.960e-88
Identity = 167/501 (33.33%), Postives = 243/501 (48.50%), Query Frame = 1
Query:    1 GHAAAVFKSQ-------LWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFH--LQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADIV--QDASGSWSLVWEEMASGNNVPFSPRAGLAAAVIQR------PLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESAD-----WGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNG------PRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWEASN----------------------------------TQGEKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTSEGIVCGGVGTCVD--FGCECDGTGEGAAAGGDFCTAD 1311
            GHA  +FK         +W+ GG  E YQT+++   +R  DVW S +G  W +   L GD+   L N DA  PG +APWY R GH+LD L A    GV  + +VL GG+ P P N++W++ +G  W F   A W  R +H S+VF   L+IIGG+PL NDVWA  ++  ++ S  +++ W   ++    P+ PRAG  A    R            + D L++MGGF G+P +D RY+  RCRNDV+ T +G  W+ V+  A      W  R W    T    +D    VT  + +   T         PR+++ GGGY G  GN +V  + GY+D W+S DG  W  VNY +GS      +S+ +W  + VD   ++ GKWGH M  ++A +                                   + +K PA+++I G   + G  V+DV+ +     C   G+ C G G C     GC C+     A   G+FC  D
Sbjct:   71 GHATCIFKCPDESGDDCIWLTGGHSEEYQTFDMSISDRNADVWWSKEGATWNKMMDLVGDYKQGLGNHDAKVPGPVAPWYGRHGHSLDALDADG-DGV-NDALVLVGGFNPLPSNEIWISVEGKSWYFDYPAPWPARAYHASAVFQGELWIIGGTPLINDVWAGRLIRKENKSSGYTISWRMASAPMKAPWRPRAGHCATTQLRRDSYAPDASNVNYTDYLYIMGGFAGFPIEDERYDNFRCRNDVWVTTNGTVWTRVTPPAGKRTMPWTGRAWHGCTTWHDPNDRSLGVTKGAINDFVTNPQNETVMHPRLYITGGGYTGTKGNHVVRQLDGYLDTWWSYDGSNWQRVNYSQGSGISQ--YSTNEWTQSYVDGQQSWKGKWGHTMELFQAKSDLDGDGIISSEPVYIEFSSDGTETAQSTSRLMNAVREDKVPAMFVIGGKTTDNGPLVNDVYSTQPGAICELNGVTCSGAGVCGPGVLGCVCN-----ADRSGEFCERD 562          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A7S3JXZ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXZ7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.340e-80
Identity = 160/454 (35.24%), Postives = 243/454 (53.52%), Query Frame = 1
Query:    1 GHAAAVF----KSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNF------DALDPGSLAPWYARFGHTLDVLQATNFSGVATE-LMVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADIVQD-ASGSWSLVWEEMASG------------NNVPFSPRAGLAAAVIQRPLVQSGFNDTLFVMGGFGGWPKDD-----PRYNG-MRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLA-WEASNTQGEKE------------PALYLIAGDAVEGGSF----VSDVFVSTETLFCTSEGIVC 1221
            GHA+AVF    K  +W++GGRG+ Y  +N +   RR D+W S DG  W Q  ++ GD+  +        D  +PG +AP++ R+GH+L+V+  TN + +    L+VL GG+ P P NDVWV+EDG  W   G A W+GRG+H ++ F DRL+I+GGSPL+NDVWA  I +     S+S+ W E+ +              N  +SPRAG AA  +Q     S     L + GG+ GWP        P Y+   RC NDV+ + DGA+W++++ +A + AR W    T +  +DP  D+T ++ +  +    P++WLAGGGY+G   N++V ++  Y D+W++ DG+ W  V+   G  T  +  SS+    T+      +LGK+GH+M+  W     Q                P+L+ IAGD      F     +D++ S   L C  +G  C
Sbjct:   61 GHASAVFPFEGKLAIWLIGGRGKSYAKWNFQTTPRRADIWYSVDGVQWNQVTEIGGDYSARRNAAFLLEDVTEPGDIAPFWERYGHSLNVVLGTNETTLEKYGLLVLCGGFAPQPSNDVWVSEDGIQWYLVGYAPWSGRGYHATAYFEDRLYIMGGSPLSNDVWAGQINKTFGKNSYSMQWIELGNAVGLDPNEWSINQGNFRWSPRAG-AAVTVQHLFSTS----RLVLTGGYAGWPCAKKGVCHPLYDSEQRCLNDVWTSTDGANWTLLTSAAPFPARAWHSFTTFADFADPRYDITLAATNLHYE---PKLWLAGGGYVGTQQNNVVHNIDAYADLWWTRDGIEWTRVSRTAG--TRDHACSSIDAYQTDT----LFLGKYGHQMVPFWRVLTDQNVCNNDECITNAEIYVPSLFFIAGDFGYSSVFDPEPSADIYASRSALLCEIDGHRC 500          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: K0TRG5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRG5_THAOC)

HSP 1 Score: 225 bits (574), Expect = 6.550e-64
Identity = 146/425 (34.35%), Postives = 212/425 (49.88%), Query Frame = 1
Query:    4 HAAAVF------KSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDF--HLQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADIVQDAS--GSWSLVWEEMASGNNVPFSPRAG-------LAAAVIQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVV--------SESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWEASNTQ-----GEK--EPALYLIAGDAVEGGSFVSDVFVS 1182
            HA A F      ++ LW+ GG  E + +     +N   DVW S DG  W Q  +L GD+   + N DA   GS  P+Y RFGH+L  L A    GV T+ M+L GGY+P P NDVW++ DG DW F G A W  R  H ++VF  +L+I+GG+PL+NDVW   + +DA+    + + W++  S     +SPRAG        A +V         F++ LF++GG            G   R+D++ + DG SW  V         +    G R +      +  S+               G  PR+++ GGGY G N N +VS++  Y D W+S DG+ W  VNYEEG+  E NLFS+ +W  T  +    Y GKWGH +   +  N +     G++  E +  L+ G  +EGG   + V+ S
Sbjct:   65 HATAQFSCPSKTETCLWLTGGYSESHWSG----ENANADVWWSLDGAEWNQVVELGGDWLQGIGNHDAERGGSRTPFYGRFGHSLSALDADG-DGV-TDAMILLGGYSPLPSNDVWISADGKDWFFGGFAPWPERAHHGAAVFNGKLYIMGGTPLSNDVWIGTLHRDATQRAGFRMDWKQEDSAQ---WSPRAGHCVVAKNSAVSVPNATDADVSFSEKLFLIGGISEGA------GGTMTRSDIWTSLDGNSWEQVVVQLQGNDDDVFQLGGRAFHGCAAFTVPSE---------------GTTPRLYVTGGGYYGNNMNRVVSALEAYTDTWYSHDGVEWTRVNYEEGTIREDNLFSTNEWTETLRNGRTMYRGKWGHTVEVLKRPNKRDCHNDGKECEEESKMLVIGGKLEGGPIENTVYSS 459          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A2D4CGF6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGF6_PYTIN)

HSP 1 Score: 212 bits (540), Expect = 2.170e-55
Identity = 153/510 (30.00%), Postives = 228/510 (44.71%), Query Frame = 1
Query:    4 HAAAVFKSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAG-NANWTGRGWHESSVFLDRLFIIGGSPLTNDVWA-ADIVQDASGSWSLVWEEMASGNNVPFSPRAGLAAAV--IQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAWEAS---------------------------------------------------------------------NTQGEKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTSEGIVCGGVGTCVDFG-CECDGTGEGAAAGGDFCTAD 1311
            HAAAV+K ++W+VGG    Y T  L     R DV SS+DG  W +              AL+    AP+  RFGH+L        S    E +VL GG++P+P  D+W T DG  W  AG    W+GRG+H + VF  RL+++GGSPL+NDVW+ A ++  AS      WE+     +VP+SPRA  A AV  +++   +   +D  FV    GGW +          R+DV++  D  SW+ + E+A W  RGW  +V+    S  + D+            GPR+WL GGG +G+     +  M  Y D+W++ +G TW      E ++++++  S+ +W++    +    LGKWGH  +A+  +                                                                      T     PAL+LIAG+   G   V D+FVS + + C  +G++C   GTC   G C C      +  GG FC +D
Sbjct:   32 HAAAVYKDRIWIVGGVSTSYYTKRLEHTTTRSDVLSSADGVTWKE--------------ALEE---APFRRRFGHSLTAFVDGRDS---VERLVLLGGFSPEPATDIWTTTDGERWAEAGVTVPWSGRGYHCTVVFQSRLWVMGGSPLSNDVWSTASLLAGAS------WEQQ---RDVPWSPRAAHACAVHRVRQNESEGDSSDRSFVF-LMGGWDETS--------RHDVWRMDDTGSWTRLLENAPWKKRGWHSLVSFD--SRTHGDIA----------RGPRLWLLGGGIIGKG----IEKMFPYTDVWYTRNGSTW------EQASSDASGISTAEWSIVSTRDARVCLGKWGHAAVAFRRAVPRAFVCGDTCVDEQNTTRLAGQLIPVCKPQSSLPSPPELRTVLKQNSVTTRTLYPDGCGLCLGGPTSRYTNTTSVPALFLIAGNV--GAQKVKDIFVSDDAMLCERDGVICSNQGTCTLGGTCLCV-----SGKGGQFCDSD 474          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: A0A2D4BHB3_PYTIN (HintN domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHB3_PYTIN)

HSP 1 Score: 206 bits (523), Expect = 1.970e-54
Identity = 142/455 (31.21%), Postives = 213/455 (46.81%), Query Frame = 1
Query:    4 HAAAVFKSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFAG-NANWTGRGWHESSVFLDRLFIIGGSPLTNDVWA-ADIVQDASGSWSLVWEEMASGNNVPFSPRAGLAAAV--IQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAW------------------------------------------------EASNTQGEKEPALYLIAGDAVEGGSFVSDVFVSTETLFCTSEG 1212
            HAAAV+K ++W+VGG    Y T  L     R DV SS+DG  W +              AL+    AP+  RFGH+L        S    E +VL GG++P+P  D+W T DG  W  AG    W+GRG+H + VF  RL+++GGSPL+NDVW+ A ++  AS      WE+     +VP+SPRA  A AV  +++   +   +D  FV    GGW +          R+DV++  D  SW+ + E+A W  RGW  +V+    S  + D+            GPR+WL GGG +G+     +  M  Y D+W++ +G TW      E ++++++  S+ +W++    +    LGKWGH  +A+                                                + S T     PAL+LIAG+   G   V D+FVS + + C  +G
Sbjct:    3 HAAAVYKDRIWIVGGVSTSYYTKRLEHTTTRXDVLSSADGVTWKE--------------ALEE---APFRRRFGHSLTAFVDGRDS---VERLVLLGGFSPEPATDIWTTTDGERWAEAGVTVPWSGRGYHCTVVFQSRLWVMGGSPLSNDVWSTASLLAGAS------WEQQ---RDVPWSPRAAHACAVHRVRQNESEGDSSDRSFVF-LMGGWDETS--------RHDVWRMDDTGSWTRLLENAPWKKRGWHSLVSFD--SRTHGDIA----------RGPRLWLLGGGIIGKG----IEKMFPYTDVWYTRNGSTW------EQASSDASGISTAEWSIVSTRDARVCLGKWGHAAVAFRRAVPRAFVCGDTCVDEQNTTRLAGQLIPVCKPQSSLPSPPELRTVLKQNSVTTRTLVPALFLIAGNV--GAQKVKDIFVSDDAMLCERDG 395          
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Match: K3W6L7_GLOUD (EGF-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6L7_GLOUD)

HSP 1 Score: 197 bits (502), Expect = 2.040e-52
Identity = 131/367 (35.69%), Postives = 185/367 (50.41%), Query Frame = 1
Query:    4 HAAAVFKSQLWVVGGRGELYQTYNLRFQNRRGDVWSSSDGQNWLQSDKLTGDFHLQNFDALDPGSLAPWYARFGHTLDVLQATNFSGVATELMVLAGGYTPDPHNDVWVTEDGNDWRFA---GNANWTGRGWHESSVFLDRLFIIGGSPLTNDVWAADIVQDASGSWSLVWEEMASGNNVPFSPRAGLAAA----VIQRPLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSESADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMGQNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTEVDNTPTYLGKWGHRMLAW 1083
            HAAAVFK ++W+VGG    Y T  L     R DV  SSDG  W++              AL+    AP+  RFGH+L         GV  E ++L  G++P+P  D+W+T +G  W  A   G   WTGRG+H S VF  +L+I+GGSPL NDVW+A  V +        WE+     NVP+SPRA  A A    +    L  +   + LFV+   GGW +          +NDV++     SW+ ++E+A W  R W  VV+    S    DVT           GPR+WL GGG +G    S ++ M  Y D+WF+ DG+ W      E S+ ES + S+ +W++    +     GKWGH ++A+
Sbjct:    4 HAAAVFKDKIWMVGGVSTSYYTKRLEKTTTRSDVVYSSDGAAWVE--------------ALEE---APFRRRFGHSLMTFTDQR-DGV--ERLLLIAGFSPEPATDIWMTANGETWTEATALGAVPWTGRGYHCSVVFAKKLWILGGSPLNNDVWSATSVLEGG-----TWEQQ---QNVPWSPRAAHACASHTVMKNTTLGDASREEFLFVV---GGWRETS--------KNDVWRMDAAGSWTQLTEAAPWKKRAWHSVVSFD--SRTIGDVTL----------GPRLWLFGGGIVG----SGITKMFPYSDVWFTRDGVEWF-----EASSDESGI-STAEWSMVSTRDKDVCTGKWGHAVIAF 309          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1232.1916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1A1_ECTSI1.030e-31084.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CQ57_9STRA1.950e-13042.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KCC5_9PHAE6.800e-12088.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y1U9_AURAN6.940e-8937.60Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2KEU6_9STRA3.960e-8833.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3JXZ7_9STRA5.340e-8035.24Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K0TRG5_THAOC6.550e-6434.35Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A2D4CGF6_PYTIN2.170e-5530.00Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A2D4BHB3_PYTIN1.970e-5431.21HintN domain-containing protein n=1 Tax=Pythium in... [more]
K3W6L7_GLOUD2.040e-5235.69EGF-like domain-containing protein n=1 Tax=Globisp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1232contigL-elsbetiae_contig1232:10673..15215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score688.7
Seed ortholog evalue1.6e-195
Seed eggNOG ortholog2880.D7G1A1
Hectar predicted targeting categoryother localisation
EggNOG OGs29PKT@1,2RWYF@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionKelch-type beta propeller
Ec32 orthologEc-12_005260.1
Exons7
Model size1669
Cds size1215
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815429.2570217-UTR-L-elsbetiae_contig1232:10672..108471622815429.2570217-UTR-L-elsbetiae_contig1232:10672..10847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1232 10673..10847 -
1691682893.8356435-UTR-L-elsbetiae_contig1232:10672..108471691682893.8356435-UTR-L-elsbetiae_contig1232:10672..10847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1232 10673..10847 -
1622815429.4533823-UTR-L-elsbetiae_contig1232:14936..152151622815429.4533823-UTR-L-elsbetiae_contig1232:14936..15215Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1232 14937..15215 -
1691682893.9216468-UTR-L-elsbetiae_contig1232:14936..152151691682893.9216468-UTR-L-elsbetiae_contig1232:14936..15215Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1232 14937..15215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815429.36025-CDS-L-elsbetiae_contig1232:10847..111491622815429.36025-CDS-L-elsbetiae_contig1232:10847..11149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 10848..11149 -
1691682893.8468583-CDS-L-elsbetiae_contig1232:10847..111491691682893.8468583-CDS-L-elsbetiae_contig1232:10847..11149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 10848..11149 -
1622815429.379834-CDS-L-elsbetiae_contig1232:11561..117931622815429.379834-CDS-L-elsbetiae_contig1232:11561..11793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 11562..11793 -
1691682893.8557255-CDS-L-elsbetiae_contig1232:11561..117931691682893.8557255-CDS-L-elsbetiae_contig1232:11561..11793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 11562..11793 -
1622815429.3918054-CDS-L-elsbetiae_contig1232:12255..125091622815429.3918054-CDS-L-elsbetiae_contig1232:12255..12509Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 12256..12509 -
1691682893.8645096-CDS-L-elsbetiae_contig1232:12255..125091691682893.8645096-CDS-L-elsbetiae_contig1232:12255..12509Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 12256..12509 -
1622815429.4021864-CDS-L-elsbetiae_contig1232:13552..136991622815429.4021864-CDS-L-elsbetiae_contig1232:13552..13699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 13553..13699 -
1691682893.876965-CDS-L-elsbetiae_contig1232:13552..136991691682893.876965-CDS-L-elsbetiae_contig1232:13552..13699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 13553..13699 -
1622815429.4203887-CDS-L-elsbetiae_contig1232:13917..140601622815429.4203887-CDS-L-elsbetiae_contig1232:13917..14060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 13918..14060 -
1691682893.8900073-CDS-L-elsbetiae_contig1232:13917..140601691682893.8900073-CDS-L-elsbetiae_contig1232:13917..14060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 13918..14060 -
1622815429.4329314-CDS-L-elsbetiae_contig1232:14325..143981622815429.4329314-CDS-L-elsbetiae_contig1232:14325..14398Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 14326..14398 -
1691682893.9001474-CDS-L-elsbetiae_contig1232:14325..143981691682893.9001474-CDS-L-elsbetiae_contig1232:14325..14398Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 14326..14398 -
1622815429.4428756-CDS-L-elsbetiae_contig1232:14872..149361622815429.4428756-CDS-L-elsbetiae_contig1232:14872..14936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 14873..14936 -
1691682893.9107375-CDS-L-elsbetiae_contig1232:14872..149361691682893.9107375-CDS-L-elsbetiae_contig1232:14872..14936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1232 14873..14936 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1232.1916.1prot_L-elsbetiae_contig1232.1916.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1232 10848..14936 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1232.1916.1

>prot_L-elsbetiae_contig1232.1916.1 ID=prot_L-elsbetiae_contig1232.1916.1|Name=mRNA_L-elsbetiae_contig1232.1916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=405bp
MVLAGGYTPDPHNDVWVTEDGNDWRFAGNANWTGRGWHESSVFLDRLFII
GGSPLTNDVWAADIVQDASGSWSLVWEEMASGNNVPFSPRAGLAAAVIQR
PLVQSGFNDTLFVMGGFGGWPKDDPRYNGMRCRNDVYKTKDGASWSVVSE
SADWGARGWFDVVTLSKVSDPYSDVTPSSPSRTFTGNGPRMWLAGGGYMG
QNGNSIVSSMIGYVDMWFSTDGLTWHHVNYEEGSTTESNLFSSMKWALTE
VDNTPTYLGKWGHRMLAWEASNTQGEKEPALYLIAGDAVEGGSFVSDVFV
STETLFCTSEGIVCGGVGTCVDFGCECDGTGEGAAAGGDFCTADQTDSES
AGIKTVILDKSLVAAVTAVATAVSAALVVGTPWSPLLSSGQIRGHVSQRV
HDVS*
back to top

mRNA from alignment at L-elsbetiae_contig1232:10673..15215-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1232.1916.1 ID=mRNA_L-elsbetiae_contig1232.1916.1|Name=mRNA_L-elsbetiae_contig1232.1916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4543bp|location=Sequence derived from alignment at L-elsbetiae_contig1232:10673..15215- (Laminarionema elsbetiae ELsaHSoW15)
GGTCACGCTGCAGCCGTGTTCAAGAGTCAACTGTGGGTTGTCGGGGGCAG GGGAGAGCTGTATCAGACGTACAACCTACGGTTTCAAAATAGACGGGGAG ACGTCTGGAGCTCGTCTGACGGGCAGAACTGGCTGCAGAGCGACAAACTG ACGGGGGACTTTCACCTACAAAATTTCGATGCGTTGGATCCCGGTTCCCT GGCGCCATGGTACGCTCGGTTCGGGCATACGCTAGACGTCCTTCAGGCGA CAAATTTCAGCGGTGTGGCGACGGAGCTCATGGTACTAGCTGGAGGCTAC ACTCCAGACCCTCACAACGACGTCTGGGTGACAGAAGATGGCAGTGAGTC TCTTTTTCTCTCAGCTATAAGTAGTGTAGTATCGAAAAAAGGGGACTAGT TTATCTAGTCTAACAACTCCGTAGAACAGGTAGCTATATACTTCGTGTGT AGTCTAGCCTACGTAGCCTACAATATATGAGTACGCTGTCTGTATATATG CGACATCTATATCAGCCTGTTTCTTCAGCAGCACATGTCTGCATACATGG GCCGATGCTTTGTTCGCGCTGTCAGCTGTCAACGTCATGGGACATCCCTT GATGCCGTGTTTGTGGAAACAAAGAGACTCTGGTGGTGCTCCAGATCGGA TGGCGTACCACGACTTACAAAGTAAATCTGCAAATATGATCTGCACTGTG AAAATCACCACCGTCATAATTGCCTCGGAAAACCGTGAGCAGTTGCTGTA CCAACCTTGCTATGGTGTGCACGCTGCTTCCTGTCCAAATTGCTGCCGTG AAAACATCGATGGGCAGATGACTGGCGGTTCGCGGGGAACGCCAACTGGA CGGGTCGAGGCTGGCACGAAAGCAGCGTGTTTCTGGACAGGTGAAGAGAG CGGTAAAAACAGTCAGGCATGTGGATTCTCGAGTGAATAACCCCGTATTC ATTGTCAGCGTCGTGATGTGGGGGATACAGCAGTACAACAGCATGTCATA GAATACAAGCCTGCAGGATCATCGTAAAAAATGCGTTGTCGGCGAATAGC CGGAGTTCAACTCCCGGCTCCCAGCAGGCTAGCTATCGAGGCTGCGCACG TTTCTTCTAACGGCAATCTACATTATTTGAATGGTTTACTCTCGGGTACA CACAGGCTGTTCATAATCGGAGGATCTCCGCTAACCAACGACGTCTGGGC GGCAGATATCGTGCAGGATGCGTCGGGAAGCTGGTCCCTCGTTTGGGAGG AAATGGCGAGCGGAAATAATGTGCCGTTCTCGCCCAGGGCGGGCTTGGGT AAGCCAGCATCAGTATCCAGTCTCAACACCCCAACAGTAGTTGTTTGCCT TGAGCATGCCAGTGGTGGGTTGGGGTATCTCGGGAGCACGATCAGCTGCG TGTGGCAACTGTCGTGCTATGTAGTATGATTATTTCGTCGTTTTTGTTTT TAACAAGATTGTTGGGGCGCCTCTGTCGGTGCTTGGCCATCGAACATGCT TGCTTAATTTCGGCAGCTGCTGCTGTGATCCAGCGCCCGCTGGTCCAGTC TGGGTTTAATGACACGCTTTTTGTGATGGGGGGATTCGGAGGATGGCCGA AAGATGACCCAAGGTACAACGGGATGCGATGCCGGAATGACGTCTACAAA ACAAAGGATGGTGGTGAGCGAGCAAGATATGTATATGTAGAAGTATATAT ATACAAGTTCCCCTTTCACGCGTTGCTCATGAACGGAACAATTCAGGGGG TGCAGCAAGAGAACAGATCAGGCGTTCGATACTTGCATGCTCTTCTGCCC GACTTCGAGCGTTTTTAACGATGTGAAATAACTGAACACCGGGGGAAGAC ACAAAAGAGGCTGGCGCAAAAATGTTGTGCCGGCTTTCGCGTTGTGCGTG TTCGCCATCGTCAGAAATCACGCAGAACAGCCGGATAAGAACAGCTAGCC GTCAAGACCTGGTACTTGTTGGCTGCTGTTCGAGCTGCGCAGCACTATGA AGATGTCGAGGAGGTGGCGACTGTTGCGCGTGGACAGCAGTGCGTGTCAC ACTTAATACCCAGAACTGGCGTACGTTGCCACGTGCGTCACCAGCCTGAA AAATTCTCCTGAAAAGCCTGGTTCAAGTGCGTGGCTTGATCAACAGCCCA AAGACCTTGCACCCAGGAAAAACTGAATATATCTAGACTAAAGATAGACT AGTCTTATATACATAGATAGAGGCAGACAGAGAGTCAGAGAGAGACAAAA AGACAGACAGACAGACAGACAGACAGACAGACACAAAAGGACAGAGAGAC AGTAGAAAGAGAGGTGCATCCACGTAGTCTAGGCGGCGAGTCGTTGAAAG AGCGTGGATACCAGAAACAACGAAAACTTGTAGTAACATATTTGTGACCA CACAGCAAGCGGTGAAGGGTTGTCGCCCGCACGTTTCGTGACTTGCAAAG CCGCTCGAACAAACTGGACGATTTTATTTACGCGACGCGTGATCGTGTAT GCAGCTCGAGAGCTCGGTACTCGGACAGGAGTTCTCGAAAGCGCCAAAGA GGGAGAAGATGATCTGACCTTGCAAGTCACGTGCTCTCGTCTGAACGACT CTCACGTATGGTGGAAGTATGTATGTGCAGTAGTAGCTCTCTACTGAAGC GCTGCCATTCCCCACATCCGGTCGCCCGCATGCCCCGTCCCGTTTCCCGT CCACAGCATCTTGGTCTGTTGTAAGCGAGAGCGCCGACTGGGGCGCTCGC GGGTGGTTCGACGTTGTGACTCTTTCCAAGGTCTCCGATCCTTACTCGGA TGTGACGCCTTCCTCGCCAAGCCGAACATTCACGGGGAACGGTCCTCGCA TGTGGCTGGCGGGTGGCGGGTACATGGGGCAGAACGGCAACAGCATCGTC TCCTCTATGATCGGCTACGTGGACATGTGGTTTAGCACGGACGGGTTGAC TTGGCACCACGTGAGGCGTAAATATTGTTCAGGGTTTAGCTGCATAGGTA CTACATAGCAGGTGTTTTTTTTTATCTAGGGAATGCTTTTTTTAAGACTC TCCGGCTGCTGTGTGGTAAACTGCGACATGATCAGCAACATCGCAGCAGC TATGCATATTCTACGGTACGTTTATCTGACAAATCGCGTCGAGGCCCGAA TATCACTGCTTCACAACGTTTTCTTCTTTGGCTTCCTCGGTGCAGATCTG CTTTCCTGTCATACTATGTAAAATGTTACGCAAATGCGATTAATAGAATA TCTATACCGTACGCAGTTTCAACCAGTTGCCACGGCCACGCCACAACAAA CACGTCGACAGCAAGCAGTAGAAGTGGTCCTTGGTGTGACCGGTGGGCCG CTGTCGTTAACGAACAGACCTTACCGCTATACAATGTGTTCCACCGGCCC CGCTGGTCGTTCGAAACCAAAGGTAAACTACGAAGAAGGATCCACTACTG AATCGAACTTGTTCTCCAGTATGAAGTGGGCTCTCACGGAGGTAGATAAC ACCCCGACCTACCTCGGCAAGTGGGGGCACAGGATGTTGGCGTGGGAAGC AAGCAACACCCAAGGAGAGAAAGAGCCCGCTTTGTACCTTATCGCTGGCG ACGCTGTGGAAGGTGGCTCGTTTGTCAGCGACGTCTTTGTCAGCACCGAA ACACGTGAGAGGCATGCGTCTCTTTCGCGTGATTGTGTTTTTATCCATGC GTGCTCTCTTCTCCTCCCTCGGTTATGAATAGGAGCAACGAGATCATCGT TCATGACGCCAATAAGGCACGAGATAGAAGATACGAGTCGGTGCAAGTCA GCCCAGTGTTTCTTCGTAGTACAACCCTCGGCGCGCGCGGCTCGAACAAC AAGCCAAGTGCACCGATGGCTTTCTCATAGACGTACACCGTACGTAGAAC CAGTATACGGGGCAGCCGGAACGGCATGACGTTGATCACGATATACCTCC CTCCGTCCCTCTGTTTATCTCTCCTTCTCTCTCTTCCTCTTCTCTCTCTG CCGGCCTCCGCCTCACTTCTCTCCCCTCTGTCCGCGTGACCACTCATATT TATGCTACCAACAAAGTTTTTTGCACATCCGAGGGGATTGTGTGCGGCGG AGTCGGCACCTGCGTGGACTTCGGCTGCGAGTGTGACGGCACGGGCGAGG GGGCGGCCGCCGGAGGAGACTTTTGCACGGCAGACCAGACAGACTCGGAG TCGGCTGGCATAAAAACGGTTATATTAGACAAATCACTCGTCGCGGCCGT TACCGCTGTCGCGACAGCTGTTTCGGCCGCGCTGGTTGTGGGCACACCTT GGTCGCCGTTGTTGTCGTCGGGGCAAATACGAGGGCACGTTTCCCAACGG GTTCACGATGTTTCTTGAGTGAGAGAAGCTTTGAATGTGAAAGGTTGCAG CTGCGGAGCAAGAGAGCAGCGAAACTGGAGAGAGGATACTGTTCTGGGTG ATACTGGACGACCAGATTTGGAACGTTTCTCGCAGGTGTTCTTTGGGACA AGAGTCATCTGGGACGAGAAAACACCACTAATTTATAACTGCA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1232:10673..15215-

>mRNA_L-elsbetiae_contig1232.1916.1 ID=mRNA_L-elsbetiae_contig1232.1916.1|Name=mRNA_L-elsbetiae_contig1232.1916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2430bp|location=Sequence derived from alignment at L-elsbetiae_contig1232:10673..15215- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTACTAGCTGGAGGCTACACTCCAGACCCTCACAACGACGTCTGGGT
GACAGAAGATGGCAATGGTACTAGCTGGAGGCTACACTCCAGACCCTCAC
AACGACGTCTGGGTGACAGAAGATGGCAATGACTGGCGGTTCGCGGGGAA
CGCCAACTGGACGGGTCGAGGCTGGCACGAAAGCAGCGTGTTTCTGGACA
GATGACTGGCGGTTCGCGGGGAACGCCAACTGGACGGGTCGAGGCTGGCA
CGAAAGCAGCGTGTTTCTGGACAGGCTGTTCATAATCGGAGGATCTCCGC
TAACCAACGACGTCTGGGCGGCAGATATCGTGCAGGATGCGTCGGGAAGC
TGGTCCCTCGTTTGGGAGGAAATGGCGAGCGGAAATAATGTGCCGTTCTC
GCCCAGGGCGGGCTTGGGCTGTTCATAATCGGAGGATCTCCGCTAACCAA
CGACGTCTGGGCGGCAGATATCGTGCAGGATGCGTCGGGAAGCTGGTCCC
TCGTTTGGGAGGAAATGGCGAGCGGAAATAATGTGCCGTTCTCGCCCAGG
GCGGGCTTGGCTGCTGCTGTGATCCAGCGCCCGCTGGTCCAGTCTGGGTT
TAATGACACGCTTTTTGTGATGGGGGGATTCGGAGGATGGCCGAAAGATG
ACCCAAGGTACAACGGGATGCGATGCCGGAATGACGTCTACAAAACAAAG
GATGGTGCTGCTGCTGTGATCCAGCGCCCGCTGGTCCAGTCTGGGTTTAA
TGACACGCTTTTTGTGATGGGGGGATTCGGAGGATGGCCGAAAGATGACC
CAAGGTACAACGGGATGCGATGCCGGAATGACGTCTACAAAACAAAGGAT
GGTGCATCTTGGTCTGTTGTAAGCGAGAGCGCCGACTGGGGCGCTCGCGG
GTGGTTCGACGTTGTGACTCTTTCCAAGGTCTCCGATCCTTACTCGGATG
TGACGCCTTCCTCGCCAAGCCGAACATTCACGGGGAACGGTCCTCGCATG
TGGCTGGCGGGTGGCGGGTACATGGGGCAGAACGGCAACAGCATCGTCTC
CTCTATGATCGGCTACGTGGACATGTGGTTTAGCACGGACGGGTTGACTT
GGCACCACCATCTTGGTCTGTTGTAAGCGAGAGCGCCGACTGGGGCGCTC
GCGGGTGGTTCGACGTTGTGACTCTTTCCAAGGTCTCCGATCCTTACTCG
GATGTGACGCCTTCCTCGCCAAGCCGAACATTCACGGGGAACGGTCCTCG
CATGTGGCTGGCGGGTGGCGGGTACATGGGGCAGAACGGCAACAGCATCG
TCTCCTCTATGATCGGCTACGTGGACATGTGGTTTAGCACGGACGGGTTG
ACTTGGCACCACGTAAACTACGAAGAAGGATCCACTACTGAATCGAACTT
GTTCTCCAGTATGAAGTGGGCTCTCACGGAGGTAGATAACACCCCGACCT
ACCTCGGCAAGTGGGGGCACAGGATGTTGGCGTGGGAAGCAAGCAACACC
CAAGGAGAGAAAGAGCCCGCTTTGTACCTTATCGCTGGCGACGCTGTGGA
AGGTGGCTCGTTTGTCAGCGACGTCTTTGTCAGCACCGAAACACGTAAAC
TACGAAGAAGGATCCACTACTGAATCGAACTTGTTCTCCAGTATGAAGTG
GGCTCTCACGGAGGTAGATAACACCCCGACCTACCTCGGCAAGTGGGGGC
ACAGGATGTTGGCGTGGGAAGCAAGCAACACCCAAGGAGAGAAAGAGCCC
GCTTTGTACCTTATCGCTGGCGACGCTGTGGAAGGTGGCTCGTTTGTCAG
CGACGTCTTTGTCAGCACCGAAACACTTTTTTGCACATCCGAGGGGATTG
TGTGCGGCGGAGTCGGCACCTGCGTGGACTTCGGCTGCGAGTGTGACGGC
ACGGGCGAGGGGGCGGCCGCCGGAGGAGACTTTTGCACGGCAGACCAGAC
AGACTCGGAGTCGGCTGGCATAAAAACGGTTATATTAGACAAATCACTCG
TCGCGGCCGTTACCGCTGTCGCGACAGCTGTTTCGGCCGCGCTGGTTGTG
GGCACACCTTGGTCGCCGTTGTTGTCGTCGGGGCAAATACGAGGGCACGT
TTCCCAACGGGTTCACGATGTTTCTTGATTTTTTGCACATCCGAGGGGAT
TGTGTGCGGCGGAGTCGGCACCTGCGTGGACTTCGGCTGCGAGTGTGACG
GCACGGGCGAGGGGGCGGCCGCCGGAGGAGACTTTTGCACGGCAGACCAG
ACAGACTCGGAGTCGGCTGGCATAAAAACGGTTATATTAGACAAATCACT
CGTCGCGGCCGTTACCGCTGTCGCGACAGCTGTTTCGGCCGCGCTGGTTG
TGGGCACACCTTGGTCGCCGTTGTTGTCGTCGGGGCAAATACGAGGGCAC
GTTTCCCAACGGGTTCACGATGTTTCTTGA
back to top