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Homology
BLAST of mRNA_L-elsbetiae_contig1232.1914.1 vs. uniprot
Match: D7G199_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G199_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.150e-108 Identity = 243/380 (63.95%), Postives = 267/380 (70.26%), Query Frame = 1
Query: 1 MRAPLVVLLFSYGISHGLGFVQPS--SAVLSQRRRSNR--CFLFSPE--DDKGPIVITTAKPSTAV--GRKVSREPGGGWGSWEKVVSQRVEQDSVLQKLQPPSG------LQVRTIEKGDMLGVSRLCIDTFRGPFQWFELPLQLFQEFAFFGQIQGRLGRVTRNEIKHSMVIVEDTSSTSPGGSRGKVVGFLEIGMLPKPSSSEESALAGEALTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAADRSPLSPAAKLDPGTGTAATAAEXXXXXXXXXXXXTTAIRKEKQPDVAYLANVVVDRRQRRRGIGRTMVSSAIEIVRELWPAEESIYVSVEQGNDIALALYQGMGFESAALEDEMMARSRRRPPRIYLSKPL 1098
M PL+ +L YG+ GL F P A + R ++ C LFSP+ D GPIV +K + A G++VS +P GGWGSWEKVVSQRVEQD VL + G L VRT GDM +SRLCID FRGPFQWFELP+QLFQEFAFFGQI+GRLGRVTRNEIKHSMVI +DT+S +VVGFLEIGMLPKPSSSEESALAGE+LTA XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXTTAI++EKQPDVAYLANVVVDR QRRRGIGRTMV+SAIEI GNDIALALYQGMGFE AALEDEMMARSRRRPPR+YLSKPL
Sbjct: 1 MHYPLIAVLCWYGLPVGLAFAPPPLVRARVGSRNTASAVACHLFSPDHGDHDGPIVRAPSKAAKAAAQGKEVSGKPSGGWGSWEKVVSQRVEQDEVLDRFTSAGGVPEAAKLAVRTANSGDMPSISRLCIDIFRGPFQWFELPIQLFQEFAFFGQIKGRLGRVTRNEIKHSMVIAQDTTSR-------RVVGFLEIGMLPKPSSSEESALAGESLTAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXTTAIKREKQPDVAYLANVVVDRGQRRRGIGRTMVNSAIEI-----------------GNDIALALYQGMGFELAALEDEMMARSRRRPPRVYLSKPL 349
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Viridiplantae |
| Seed ortholog score | 62.4 |
| Seed ortholog evalue | 5.1e-07 |
| Seed eggNOG ortholog | 554065.XP_005847348.1 |
| KEGG ko | ko:K20793 |
| Hectar predicted targeting category | signal peptide |
| EggNOG free text desc. | FR47-like protein |
| EggNOG OGs | 28J24@1,2QREC@2759,37HYN@33090 |
| EC | 2.3.1.258 |
| COG Functional cat. | S |
| Best tax level | Viridiplantae |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03036 |
| Ec32 ortholog description | Secreted acetyltransferase (GNAT) domain protein |
| Ec32 ortholog | Ec-12_005280.1 |
| Exons | 4 |
| Model size | 1107 |
| Cds size | 1107 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815429.0969841-CDS-L-elsbetiae_contig1232:3630..3759 | 1622815429.0969841-CDS-L-elsbetiae_contig1232:3630..3759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 3631..3759 - |
| 1691682893.7516577-CDS-L-elsbetiae_contig1232:3630..3759 | 1691682893.7516577-CDS-L-elsbetiae_contig1232:3630..3759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 3631..3759 - |
| 1622815429.1073089-CDS-L-elsbetiae_contig1232:4377..4953 | 1622815429.1073089-CDS-L-elsbetiae_contig1232:4377..4953 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 4378..4953 - |
| 1691682893.7627099-CDS-L-elsbetiae_contig1232:4377..4953 | 1691682893.7627099-CDS-L-elsbetiae_contig1232:4377..4953 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 4378..4953 - |
| 1622815429.117399-CDS-L-elsbetiae_contig1232:5659..5723 | 1622815429.117399-CDS-L-elsbetiae_contig1232:5659..5723 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 5660..5723 - |
| 1691682893.7713997-CDS-L-elsbetiae_contig1232:5659..5723 | 1691682893.7713997-CDS-L-elsbetiae_contig1232:5659..5723 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 5660..5723 - |
| 1622815429.1274383-CDS-L-elsbetiae_contig1232:7744..8082 | 1622815429.1274383-CDS-L-elsbetiae_contig1232:7744..8082 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 7745..8082 - |
| 1691682893.7801669-CDS-L-elsbetiae_contig1232:7744..8082 | 1691682893.7801669-CDS-L-elsbetiae_contig1232:7744..8082 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1232 7745..8082 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1232.1914.1 >prot_L-elsbetiae_contig1232.1914.1 ID=prot_L-elsbetiae_contig1232.1914.1|Name=mRNA_L-elsbetiae_contig1232.1914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=369bp
MRAPLVVLLFSYGISHGLGFVQPSSAVLSQRRRSNRCFLFSPEDDKGPIV
ITTAKPSTAVGRKVSREPGGGWGSWEKVVSQRVEQDSVLQKLQPPSGLQV
RTIEKGDMLGVSRLCIDTFRGPFQWFELPLQLFQEFAFFGQIQGRLGRVT
RNEIKHSMVIVEDTSSTSPGGSRGKVVGFLEIGMLPKPSSSEESALAGEA
LTAARAAAALAAAATTAPAAAAAAAAGKGGGKAADRSPLSPAAKLDPGTG
TAATAAEEEDGRSDDAGGSTTAIRKEKQPDVAYLANVVVDRRQRRRGIGR
TMVSSAIEIVRELWPAEESIYVSVEQGNDIALALYQGMGFESAALEDEMM
ARSRRRPPRIYLSKPLRE* back to topmRNA from alignment at L-elsbetiae_contig1232:3631..8082- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1232.1914.1 ID=mRNA_L-elsbetiae_contig1232.1914.1|Name=mRNA_L-elsbetiae_contig1232.1914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4452bp|location=Sequence derived from alignment at L-elsbetiae_contig1232:3631..8082- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTGCTCCGTTGGTAGTCCTACTCTTCTCGTACGGCATATCTCATGG
CCTAGGGTTCGTCCAGCCCTCCTCTGCCGTGTTGTCGCAGCGCAGAAGAA
GCAACCGTTGTTTTCTGTTCAGCCCGGAGGATGACAAAGGGCCGATCGTG
ATTACAACAGCGAAGCCAAGCACGGCAGTAGGGAGGAAGGTATCGCGCGA
ACCGGGTGGTGGATGGGGTTCTTGGGAGAAGGTAGTATCTCAGCGCGTGG
AGCAGGATTCCGTGCTTCAAAAGCTACAACCTCCATCAGGGCTTCAAGTG
CGGACAATAGAGAAGGGCGACATGCTCGGTGTTTCGAGGTCGGTGTCATG
CATGGGGATGGGTTACCATGTGGACCTGTTGTAGATATAGTCTACATATG
TGTAACCTTAGCTGGTCCATCTGCCCGCCACTATGTTTGCGTGTCTCTCA
ATGAGGTCGAAAGCCGAAGCTCGTCTCAAGTGTGGAGGAGTTAATCTCTT
GCTGCTGTGAGCATGTGTGTGGCATCAGGCAGTGCCCGAAAGCTGAAAGC
TCCCTAAATTTGGAAGTAGACATGTTGATGTACTACATATGTACGCACGC
CGCCAACGCCCAGCTCTCTGTTGCCTCCTCTGTTGCCTCCTTTGTTGCTG
CACAGAGACCTGTGTGAGAAAGAGGCTAGATTTTCGTGTTTAGGAGACAT
GCTAGCCCCATCCCCAGAAACAACACGTGCCAAGTGTCGTGCATGTACAT
ATTGAGACGGGGAATCGCACAGCAGTTCTGTTGCGGAGGCAGGGACAGGA
CTCGGTCTACTAGATACATATTAAGCTTGGCTAACTCGGCCAGGTCGGCC
AGGTTTTGAAGACACTCTCCTGGCCGCATGCAGGAACAGTCTCCCCTTGC
CACTGTTTAACTTTGGGACGTACATTCTGGGTACACACAGCAGTCTTTTT
TTTTTAAGGTTGGCCTCCCCCAGTGGCCCGGTAGCGTCCCCTGCTTTACT
ACTGTACAATCTGGATCATTTTTTTTACCTGGATCAGTAAGTTGTCGAAG
TGTACCATCTCCTTGGCCGGGAACTTAAGCACATACGTCGAAGGGCATCC
CAAAAGAGTAACATTGCCGGGGGGCAGGCTTCAAACGGACCCTTGCGCCT
TGAGTGGCGCTGGATCAAAATAGCCTTTTTGGCCCGTTTCGGACTGTTGT
AAAAATGCGGCCCAACTCCGACCCTTAGCCTATGGCGGTGCACACCGAGA
CTACCACACCCAACCAGAGGCTACGAGGAGACACAGGTGTACTCGAATAG
CATCTTAGGGCAACCTCTGGCGTCCTCAGCAGCGGCGGCAGTCCCGTTTT
GAAATGGCAGTGACGTATGCCGTGTCAAGAGCTTTAACAGCGGTAGATTC
AGATTTTCTACGAAGAACGGAGGAACGCAAAGGCCCTACAGCACCGCTAG
GGAGACAAACGCTACGCGAAGGTAGCTGTTGTCCTTAGCTTTCGATATAT
ATGTTTACCTCCTGGCCAAGGAGAACGTACTTCATTTTAAATTGCGACGG
CGCTTAGTGTAATAGCGAGAGTATACCAAAAATCAGTTGCGTCGCTATAA
AGCCCTAGTTTTTTTTTAGTTTTATCGACCAGCTGCTAACCACGTCAGTT
TTTGCCGGGTGCGGACCACAAAACACAACATGCCTCTTCGCCTTTTCTGG
GTTTCGGCCTTTCCCCCTTAGCCACGTGATCGTGTCCAGCCCTAAAACAC
CGCTATTGTTGTATTGATGAGCCAACGAAGTCAGTTCCAAACGTCAAAAG
CCACGGGCGGGAATGCAGAATCACGCGTAGCCGATGCATGCCTTCGATCT
CAGATTTCTATGCCTTTCGATGGGGTTTCCATGAGTGACGACTGTTTATG
TAAGCTGGCATAACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAA
CCACATTTTTTTTTTTTTTTTTTTTTTTTACACACACCCCCCCTCCCNNN
NNNNNNNATCTCAGTTTTCTTTGCCTTTCGATGGGGTTTCCATGAGTGAC
GACTGTTTATGTAAGCTGGCATAACCCCCCCCCCCCCCCCCCTGCCGACC
ATATATATATACTGTATATTTTTTATTTTCCTGAACGAAAACCCGACTCA
CGTTGCGTACAGGGTTAACAGCAGTTTACCGCTCAATTCATGGCACCCAG
GACTTGTGTCTCGATGGGGTGGACGATGGGAACACGCACTTCGCTTTTGT
TCTCCCCGAGCACCGGCTGACCCTCTCTGCCGTCACCTCTCCTCCTGGAT
CGACGCATTGCTGTTTTGCCTGTTTTTTTCTGTTTTTTTTTTCTTTCTCT
GAATTGCAGACTTTGCATCGACACTTTTAGAGGACCGTTCCAGTGGTTCG
AGCTGCCCTTGCAGCTGTTCCAGGTGTGTGGTACTTTTTGCAACGAACTG
CTGCTGGACCCCCCCCCCGATGTTGATACAGGTACAGGACACACGCAAAG
GCCGCGGTAGCCGGGCGATCAATTGGTAGATACTTTTTGAACCAAGCCAG
TCGAACCGCATAGGACTGACTCATTTGGGTTGGCGGACGGACGCGTTTCA
CAATTTCTACTGTGCATCTCAGAGCTCGTTGGGGATACCGCCCATGTAGA
ATTCGCCTCCTCGCTATGTTTTGTTCCAAACACACGAGTGTCGCTAGCTG
CCCTTGAGTCAGCCCGCACGCGCGGTAGAGCCGGTTTGTCTAGTCACCCC
TGCAGCGTCCCGTGGCAACAGCAGTGTAAGAGTCCGAGCGAGCGCTCTTG
GCTTGTGGCCAGTCCCCCCTCAACACCTCTGCCGCCGTGTTCAACCCGTC
CCCTCCCTGCTCTGGTGGCGCGCTGTGTGCGTGCGTTCTCTTTTTATCCT
GGTTCCGCCCAAAAAATGTTGTCGAGGGCGACGATGGCCACGGCGGTGGT
GGCGTTTTTGATGCCACACCCACCGGCCGTGCTTGCTGCCTGGCGCTCAG
CTGTTTTGTTTTTCTGCTTCCGACGACCCGGTCGATCGATCGATGGATCG
ACCGACCAGTGCATGTAATCAATCGTTCGTCCACCGGCCGCCGCCCCGGG
CAAAACTAAAATATGAACGCTGTGGTCAGGAGTTCGCGTTCTTCGGGCAG
ATCCAAGGCCGCCTGGGACGCGTGACGCGGAACGAGATCAAGCACAGCAT
GGTCATCGTCGAGGATACGAGCAGCACCAGCCCCGGCGGCAGCAGGGGCA
AGGTGGTGGGCTTCCTCGAGATCGGCATGCTCCCGAAGCCCAGCAGCAGC
GAAGAGAGTGCCCTCGCCGGGGAGGCGCTGACAGCGGCAAGAGCAGCGGC
CGCGCTGGCAGCAGCAGCAACAACAGCCCCAGCAGCAGCAGCAGCAGCAG
CAGCTGGGAAGGGGGGCGGGAAGGCCGCAGACAGATCACCTTTGTCGCCG
GCGGCAAAACTAGACCCGGGCACCGGCACAGCGGCGACGGCGGCGGAGGA
AGAGGACGGCCGGAGTGATGATGCGGGTGGCAGCACTACGGCCATCAGGA
AGGAGAAGCAGCCGGACGTGGCGTACTTGGCCAACGTCGTGGTTGACAGG
AGGCAGCGGCGGAGAGGGATCGGCCGCACCATGGTCAGCTCGGCCATCGA
GATCGTCAGGGAGCTGTGGCCTGCGGAGGAGAGCATCTACGTCTCCGTTG
AGCAGGTAAGGAACGAGAGAAGGGGTACAGCGAAGGCGGCCGAGGTGGAG
AGAGAGTGGGAGGAAGTTTCCGCGGTCGCGCTGCCAAGGAGGTACGGCAT
GCCCGGAGAGCAGCGCGGTGTGCTTGCAGGAGGACGGTCGCTGGTATGGG
ATGGGTTGTTGGGCAGCTGTGGCTTCTCCACTCCTCCTCCTCCCGCTGCT
GAGACGCACACACGTAATTCGCCGCTTGCTGCACTGCGTGTTGATCTGCC
CCGTTTGATCGAAGTGCTGGGGCAAGAGGAGAAAGTGCCATGCACAAGTC
TATACTACTGTTACTGCTGTAGTACATACGTCTCACGGGTTCGGCTGCTG
GATGCACTTGCCGCGCATGGAAGTCACATGTGCGTATGTACTTTCCTTCT
CCTTGACAAGCCTTGCCGATCGAAAAGCCGTGTTGCTGGCGCTCGTTGAG
TGGGTGTGCCCGCTCGCCGCCGTGGGGTTTGCGCGAAAGAGGCCAATTCT
TCCAAGCACGGCAGTAGTCACTACAATTAGTCAAGTGAAGATGTCCACTC
CTAAGACAATGTCATCGCCGCGCGCTTGCCGCTGTCTCGCAACGCAACCG
CCGTGGTTTGTCCCTCGAAATAGGGCAACGATATCGCCCTTGCCTTGTAC
CAGGGGATGGGTTTCGAGTCGGCAGCCCTGGAGGACGAGATGATGGCGAG
GAGCCGAAGACGCCCTCCCCGGATATACCTCTCCAAACCCCTCCGCGAGT
AA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1232:3631..8082- >mRNA_L-elsbetiae_contig1232.1914.1 ID=mRNA_L-elsbetiae_contig1232.1914.1|Name=mRNA_L-elsbetiae_contig1232.1914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2214bp|location=Sequence derived from alignment at L-elsbetiae_contig1232:3631..8082- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTGCTCCGTTGGTAGTCCTACTCTTCTCGTACGGCATATCTCATGG
CCTAGGGTTCGTCCAGCCCTCCTCTGCCGTGTTGTCGCAGCGCAGAAGAA
GCAACCGTTGTTTTCTGTTCAGCCCGGAGGATGACAAAGGGCCGATCGTG
ATTACAACAGCGAAGCCAAGCACGGCAGTAGGGAGGAAGGTATCGCGCGA
ACCGGGTGGTGGATGGGGTTCTTGGGAGAAGGTAGTATCTCAGCGCGTGG
AGCAGGATTCCGTGCTTCAAAAGCTACAACCTCCATCAGGGCTTCAAGTG
CGGACAATAGAGAAGGGCGACATGCTCGGTGTTTCGAGATGCGTGCTCCG
TTGGTAGTCCTACTCTTCTCGTACGGCATATCTCATGGCCTAGGGTTCGT
CCAGCCCTCCTCTGCCGTGTTGTCGCAGCGCAGAAGAAGCAACCGTTGTT
TTCTGTTCAGCCCGGAGGATGACAAAGGGCCGATCGTGATTACAACAGCG
AAGCCAAGCACGGCAGTAGGGAGGAAGGTATCGCGCGAACCGGGTGGTGG
ATGGGGTTCTTGGGAGAAGGTAGTATCTCAGCGCGTGGAGCAGGATTCCG
TGCTTCAAAAGCTACAACCTCCATCAGGGCTTCAAGTGCGGACAATAGAG
AAGGGCGACATGCTCGGTGTTTCGAGACTTTGCATCGACACTTTTAGAGG
ACCGTTCCAGTGGTTCGAGCTGCCCTTGCAGCTGTTCCAGACTTTGCATC
GACACTTTTAGAGGACCGTTCCAGTGGTTCGAGCTGCCCTTGCAGCTGTT
CCAGGAGTTCGCGTTCTTCGGGCAGATCCAAGGCCGCCTGGGACGCGTGA
CGCGGAACGAGATCAAGCACAGCATGGTCATCGTCGAGGATACGAGCAGC
ACCAGCCCCGGCGGCAGCAGGGGCAAGGTGGTGGGCTTCCTCGAGATCGG
CATGCTCCCGAAGCCCAGCAGCAGCGAAGAGAGTGCCCTCGCCGGGGAGG
CGCTGACAGCGGCAAGAGCAGCGGCCGCGCTGGCAGCAGCAGCAACAACA
GCCCCAGCAGCAGCAGCAGCAGCAGCAGCTGGGAAGGGGGGCGGGAAGGC
CGCAGACAGATCACCTTTGTCGCCGGCGGCAAAACTAGACCCGGGCACCG
GCACAGCGGCGACGGCGGCGGAGGAAGAGGACGGCCGGAGTGATGATGCG
GGTGGCAGCACTACGGCCATCAGGAAGGAGAAGCAGCCGGACGTGGCGTA
CTTGGCCAACGTCGTGGTTGACAGGAGGCAGCGGCGGAGAGGGATCGGCC
GCACCATGGTCAGCTCGGCCATCGAGATCGTCAGGGAGCTGTGGCCTGCG
GAGGAGAGCATCTACGTCTCCGTTGAGCAGGAGTTCGCGTTCTTCGGGCA
GATCCAAGGCCGCCTGGGACGCGTGACGCGGAACGAGATCAAGCACAGCA
TGGTCATCGTCGAGGATACGAGCAGCACCAGCCCCGGCGGCAGCAGGGGC
AAGGTGGTGGGCTTCCTCGAGATCGGCATGCTCCCGAAGCCCAGCAGCAG
CGAAGAGAGTGCCCTCGCCGGGGAGGCGCTGACAGCGGCAAGAGCAGCGG
CCGCGCTGGCAGCAGCAGCAACAACAGCCCCAGCAGCAGCAGCAGCAGCA
GCAGCTGGGAAGGGGGGCGGGAAGGCCGCAGACAGATCACCTTTGTCGCC
GGCGGCAAAACTAGACCCGGGCACCGGCACAGCGGCGACGGCGGCGGAGG
AAGAGGACGGCCGGAGTGATGATGCGGGTGGCAGCACTACGGCCATCAGG
AAGGAGAAGCAGCCGGACGTGGCGTACTTGGCCAACGTCGTGGTTGACAG
GAGGCAGCGGCGGAGAGGGATCGGCCGCACCATGGTCAGCTCGGCCATCG
AGATCGTCAGGGAGCTGTGGCCTGCGGAGGAGAGCATCTACGTCTCCGTT
GAGCAGGGCAACGATATCGCCCTTGCCTTGTACCAGGGGATGGGTTTCGA
GTCGGCAGCCCTGGAGGACGAGATGATGGCGAGGAGCCGAAGACGCCCTC
CCCGGATATACCTCTCCAAACCCCTCCGCGAGTAAGGCAACGATATCGCC
CTTGCCTTGTACCAGGGGATGGGTTTCGAGTCGGCAGCCCTGGAGGACGA
GATGATGGCGAGGAGCCGAAGACGCCCTCCCCGGATATACCTCTCCAAAC
CCCTCCGCGAGTAA back to top
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