mRNA_L-elsbetiae_contig12311.1911.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12311.1911.1
Unique NamemRNA_L-elsbetiae_contig12311.1911.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 301 bits (772), Expect = 3.220e-102
Identity = 150/192 (78.12%), Postives = 171/192 (89.06%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MGIDL AGGRRVGHK R+ P SDNVYL LLVKL+RFLARRTDS F KVVLKRLYMS+TNR PLS+SRLAR+M++K+  TAV+VGTVTDD RLLEVPK+SVCALRFTETARARIL +GGEC+TFDQLALRAPKG+ TVLLRGPK  RE  +HFGHR+T  ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct:    1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 299 bits (765), Expect = 3.760e-101
Identity = 152/192 (79.17%), Postives = 168/192 (87.50%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MGIDL AGGRRVGHKVRTSPKS NVYL LLV+L+RFLARRTDS F KVVLKRLYMSKTN  P+S+SRL RYM+ KE  TAV+VGTVTDD RLL++P L VCAL+FTE ARARIL AGGE +TFDQLAL+ PKG  TVLLRGPKNAREAVRHFGHR+T++++HTH  VKPYVRSKGRKFEKARGRR S GFKV
Sbjct:    1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.530e-100
Identity = 150/192 (78.12%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MGIDLVAGGRRVGHK R++PKSDNVYLGLL KL++FLARRT+S F   VLKRLYMSKTNR PL L RL+++M  K+  TAV+V TVTDD RLLEVPK++VCALRFTE+AR+RI+AAGGEC+TFDQLAL+ P G+N VLLRGPKNAREA RHFGHRTTV N HTH+ VKPYVRSKGRKFEKARGRR SNGFKV
Sbjct:    1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 294 bits (752), Expect = 3.590e-99
Identity = 148/192 (77.08%), Postives = 166/192 (86.46%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MGID+VAGGRRVGHK RT  KS+NVYL LLVKL+RFLARRTDSAF K VLKRL+MS+TNR PLSLS LAR+MR K+   AVLVGT+TDD R+L VPK++VCALRFTETARARI+ AGGEC+TFDQLALRAPKG+NTVLLRGPK ARE   HFGHR+T  ++ TH  VKPYVR+KGRKFEKARGRR S GFKV
Sbjct:    1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 285 bits (729), Expect = 3.200e-96
Identity = 149/157 (94.90%), Postives = 152/157 (96.82%), Query Frame = 1 
Query:  127 FLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            FL RRTDSAFAKVVLKRLYMSKTNRAPLSLSRL   +RNKETSTAVLVGTVTDDVRLL VPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGH+TTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct:    2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRL---VRNKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA)

HSP 1 Score: 285 bits (730), Expect = 7.760e-96
Identity = 144/192 (75.00%), Postives = 166/192 (86.46%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MGIDL +GGRR GHK RT+PKSDNVYL LLVKL+RFLARRTDS F  V+LKRL+MSK NR P+++SRL R+M+ KE  TAV+VGT+TDD R+LEVPKLSV AL+ T TARARIL AGGE +TFD+LALRAPKGTN VLLRGP + REA+ HFGHR+TV N+HTHD+VKPY RSKGRKFEKARGRRRS GFK+
Sbjct:    1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.000e-94
Identity = 147/196 (75.00%), Postives = 167/196 (85.20%), Query Frame = 1 
Query:   16 SNMGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETS--TAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            + MGIDLVAGGRRVGHKVRT+P SDNVYL LLVKL+ FLARRT S F K V KRL+MSKTN+ P+S+S++A+YM  +E    TAV+VGTVTDD+RL E+P L VCALRFTE ARARI+ AGGEC+TFDQLAL APKG+N VLLRG  N REA++HFGHR TV NLHTHD+VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct:   10 NKMGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA)

HSP 1 Score: 277 bits (708), Expect = 2.520e-92
Identity = 140/199 (70.35%), Postives = 164/199 (82.41%), Query Frame = 1 
Query:    1 ASLFLSNMGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            A  F    GIDL+AGG+ VG K RT+PKS+NVYL LLV+L+RFLARRT+S F  +VL+RLY S TN+AP+S+ R+ARYM   E   AV+VGTVTDD+RLL VPK+SV AL FTETARARI  AGGEC++FDQLALRAPKG NTVLLRG + ARE  RHFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct:    4 ARFFFVLAGIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A024TMV8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=A0A024TMV8_9STRA)

HSP 1 Score: 274 bits (700), Expect = 2.960e-91
Identity = 135/192 (70.31%), Postives = 165/192 (85.94%), Query Frame = 1 
Query:   22 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            MG D+VAGG+  G K RT+PKS+NVYL LLV+L+RFLARRTD+ F + VLKRLYMS+TN+ P+S++R+ARYM+NKE   AV+VGT+TDD+RL +VPKL++ AL FTE+ARAR+L AGGE +TFDQLALRAPKG NTVLLRG K ARE  RHFGH +T+++++THD VKPYVRSKGRKFEKARGRR S GFKV
Sbjct:    1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192
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BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Match: A0A418B288_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A418B288_9STRA)

HSP 1 Score: 272 bits (695), Expect = 2.660e-90
Identity = 134/191 (70.16%), Postives = 164/191 (85.86%), Query Frame = 1 
Query:   25 GIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 597
            G D+VAGG+  G K RT+PKS+NVYL LLV+L+RFLARRTD+ F + VLKRLYMS+TN+ P+S++R+ARYM+NKE   AV+VGT+TDD+RL +VPKL++ AL FTE+ARAR+L AGGE +TFDQLALRAPKG NTVLLRG K ARE  RHFGH +T+++++THD VKPYVRSKGRKFEKARGRR S GFKV
Sbjct:   15 GKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 205
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12311.1911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NFY8_9STRA3.220e-10278.13Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UVJ6_9STRA3.760e-10179.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZAE3_9STRA1.530e-10078.13Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
F0Y951_AURAN3.590e-9977.08Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A8D0ZR79_PIG3.200e-9694.90Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A4D9D1Z3_9STRA7.760e-9675.00Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A7S2BC13_9STRA2.000e-9475.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XV36_9STRA2.520e-9270.35Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A024TMV8_9STRA2.960e-9170.31Ribosomal_L18e/L15P domain-containing protein n=8 ... [more]
A0A418B288_9STRA2.660e-9070.16Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12311contigL-elsbetiae_contig12311:1960..5253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue1.3e-99
Seed eggNOG ortholog2880.D7FML2
Preferred nameRPL18
KEGG koko:K02883,ko:K18749,ko:K21442
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0031090,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055044,GO:0071704,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.ribosomal protein
EggNOG OGsCOG1727@1,KOG1714@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko04131
Ec32 ortholog descriptioncytoplasmic ribosomal protein L18
Ec32 orthologEc-23_000720.1
Exons3
Model size597
Cds size576
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12311.1911.1prot_L-elsbetiae_contig12311.1911.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12311 1960..5232 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815428.8739233-CDS-L-elsbetiae_contig12311:1959..20651622815428.8739233-CDS-L-elsbetiae_contig12311:1959..2065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 1960..2065 -
1691682893.6134589-CDS-L-elsbetiae_contig12311:1959..20651691682893.6134589-CDS-L-elsbetiae_contig12311:1959..2065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 1960..2065 -
1622815428.884678-CDS-L-elsbetiae_contig12311:3701..38731622815428.884678-CDS-L-elsbetiae_contig12311:3701..3873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 3702..3873 -
1691682893.6274178-CDS-L-elsbetiae_contig12311:3701..38731691682893.6274178-CDS-L-elsbetiae_contig12311:3701..3873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 3702..3873 -
1622815428.8959684-CDS-L-elsbetiae_contig12311:4934..52321622815428.8959684-CDS-L-elsbetiae_contig12311:4934..5232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 4935..5232 -
1691682893.6369367-CDS-L-elsbetiae_contig12311:4934..52321691682893.6369367-CDS-L-elsbetiae_contig12311:4934..5232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12311 4935..5232 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815428.908721-UTR-L-elsbetiae_contig12311:5232..52531622815428.908721-UTR-L-elsbetiae_contig12311:5232..5253Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12311 5233..5253 -
1691682893.6465287-UTR-L-elsbetiae_contig12311:5232..52531691682893.6465287-UTR-L-elsbetiae_contig12311:5232..5253Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12311 5233..5253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12311.1911.1

>prot_L-elsbetiae_contig12311.1911.1 ID=prot_L-elsbetiae_contig12311.1911.1|Name=mRNA_L-elsbetiae_contig12311.1911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFAKVVL
KRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSV
CALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVR
HFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV
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mRNA from alignment at L-elsbetiae_contig12311:1960..5253-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12311.1911.1 ID=mRNA_L-elsbetiae_contig12311.1911.1|Name=mRNA_L-elsbetiae_contig12311.1911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3294bp|location=Sequence derived from alignment at L-elsbetiae_contig12311:1960..5253- (Laminarionema elsbetiae ELsaHSoW15)
GCAAGCCTCTTCCTCAGCAACATGGGTATTGATCTAGTGGCCGGTGGCCG
ACGTGTCGGACACAAGGTCCGCACGTCGCCCAAGTCGGACAATGTGTACC
TTGGACTGCTGGTTAAGCTCTTCAGGTTCCTTGCCCGGAGGACGGACAGC
GCGTTCGCCAAGGTGGTCCTCAAGCGTCTGTATATGTCCAAGACCAACCG
TGCGCCCCTGTCCCTCTCCCGCCTGGCACGGTACATGAGGAACAAGGAGA
CCAGCACGGCTGTGCTTGTGGGAACCGTGACGGATGACGTCCGCCTCCTC
GAAGTACCCAAGCTGTCTGGTGAGCAAGCTTGTGTGATTCTTGAAAGAAG
CCTGCCTCGCGTAGAGTGGGTGGCGCTCGCGCTTTCCTGCTGTCTCCGAC
CACTCCCGTGTTGATAGCCCAATGTCTATGCGAGGGCCGTGGGAACGGGT
GAGGTGCATTGATACAATGGGATTCGATTTGGCTCAAGTGGATGTGGGGT
GCGCGTATACTGAGCTTCTGCTGTCTGTTTCCTCTCGTCGGTACCGTGAT
CTGATGAGTTGTTGCCTTTTTTTGTGTCAACACCCATCCACACCCAAAAA
TACAACCGGCTTAAACATTTGCAGACATCATATCCAAGCACCGACATGCT
CGCATCCTTGAACATCAGGTATCGCTTTCAGGCGTTAATGTAACATTTTT
GTTCATCATTCCGGTCGGATATCGTGTGTAGGGTTACGTACATGAGGAGT
CAACGTACATCTAGCTGTACAACAAACGTGTGCTGCAAACAAACACGGGC
ATGGTACCTCCTACTTGTATAGATGATATGACAAACTGCTTGCTGCTGTA
GTTGTGTGTTTCGCGTCCAAACGGACAACTCCGGAAACTCAAACCGCGCA
CGCGTGCATCGTTGGTGATGGTGTAAGGTAGGCTCTCGAAAATCCCCCCT
ACGAGAGGCAGTAGTAGCAACAAGCAAGATGGCAGTCAGACGAGACAGGG
TACTTGCTGCTCTGGTGAGTTTGTTCTACTGACTATTTTATTTACGGTCC
GTCACAAGCGACACAGGTTCGAGACAACCAGAGTGGAGGCATGACTCTTT
GTTGTTTCTTGACGTTCAGAGTACCGTGTGTTCCATTATTGGTCCCTCGG
CAAACAGCTGGAGTGCCACAGTAGTGAAAGCAGGATGAGTGCTGTAATTC
CGCCCTGCTGCTGACAGAAAGCCGTAGATAACAATGCTTTGTATTCCTCG
CTGAGGCCTCGGCACCCTCGCATTGTGTGATGAGATAAAAGGCTAGAACG
TATGGTGAAGAAATGATGTCTGAATCTGTCTTGCTGTGAAATGCTAAGTC
GACGCCCTACCCGCAATATGTACTTGTTAGTGTGCGCTCTCAGGTTCACC
GAGACCGCCCGCGCCCGCATCCTCGCCGCTGGCGGAGAGTGCATCACCTT
TGACCAGCTGGCGCTCCGGGCGCCTAAGGGCACCAACACTGTGCTCCTCC
GCGGCCCCAAGAACGCTCGCGAGGCTGTCAGGCACTTCGGCCACAGGACC
ACGTACGTTTGGTATCTCGATTCTACCAAATTCCATTGATAGCAGTCATC
CCTCGTAAGGCTCATCATACGAGCGTTGATGCCTGTCGCGTCTTTGACTT
CGAGGTTGTCAAGCGGGTACATTAGAAGCTACGGCCGTGTTGTTTCCCAC
ACACCTATCTTGTGTCCAAAATGTCCATGGGCCCCGTGATGGCAAAACAG
GACACACGCGAGAAAACGCAGCAACCCAAATATATAGTGGAAGTAGGACA
CACGCGCAGCACTGAATCACGATAACAGGCTCGCCCCCCCTGAACTGTCA
GCGGTCTTATCCCGTTAGGAGCGCAGAGTAAACAATTCTGAGTATGATGC
AGGCGACTGGAAAGCAGTAAAAAATTAGCTACCATTGGCAGCCCGACCAG
AAAGACAAGAGGGCCGCAAGCCTTCACCACTCACATGATGTGCGGCGATA
TCCGTATCCGCCGTGGAGTACCATGTACGGTAGTTTGTTCTCTAGGATTA
TTAAAAGAGGCAAATAATTTACTCTTTGTGTGGATGCGGATTTCTTGCCA
CTGGAGACTGGGTCAGTGAGGAATGGCTGTGTGTCTCCCTCCAACAGTAG
CAGTCCCCCCGGGAACAACTTTTGCACAGATTGGACGTCAACAGCTGAAG
GTAACACCGGTTTTTATGGGAGCACAAAGTTCATTTTGAGAAAAGTTATT
TTTTTCGTATCGTTGGGCATTCTTCGTCGCCAAGAGCTCGGAATCGTGCC
TGAGCACCCCGAGAACAGCTGAATCTCTCGTCCAGAGGTTTGTAGATCTT
CTGCCCATTCTGGCAGACTTCACGTTTAATTTTTCGTCGAGGAGCAAGAG
AGGCAACATTTTGACAACCTTTCGCCAGAAAAGCATTTTCGGGCGAAAAG
TTTGCAAACTTTTGCACGAACAGGCTATTTTGTTATAACGTTGGCACAAT
GTTGCCATATTGTTCCTCGACAAAAAATCAAACGTGAAGTCTGCCAGAAT
GGGCAGTAGATCTAGAAACCTCTGGACGAGAGCTTCAATTGTCCTCGAGG
TGCGCAGGCACGATTCCGAGCTCTTGGCGATGAAAAGTGCCCAACAATAC
GAAAAAAACAACTTTTCTCAAAATAAACTTTGTGCTCCCATAAAAACCAG
TCTTCGGTACAAATCTTTTTTGAAAATTCTGTCACAGCAGATTTGCTATG
TGCCCATTGCTGCGTTTCGCAGGGCACATGGTACAACCAAAAGTACTGCA
ACACTGCAGGTTAAATGGCAACGAACCGTGGCGTGGCCGCTCGTCCTTTT
TGGGGGGCTTGTAGAAGTAGCCTAGCCGCTCTACCCTTGTGCCATGAAAT
GTTCCAAAGCTCTGTGTCATAGTTACGACGGTTCAAATTGGGAACATAAG
AGCGACTTGGTGCATCGGACAACCATGCAATGCCTGGAGGGGAAATTTTC
AACTTCGTGCAGGACAGAGGTGAATTTCAGAAAAAATATGCGCGCCCCTG
GCTTGTACGGAGTATGCATACACGTATGCCTCCGTTGCATCGATGCACCA
CACCCCGACGATTCGCCCGCTAATCATGATGCTTTCTCTTTGGGTTTCGC
TTGTGGCCCGCCTGCCAACTTTGACACCCCGTTTGCAGCGTCAACAACCT
GCACACCCACGACTCCGTCAAGCCGTACGTGCGCTCCAAGGGGCGCAAGT
TCGAGAAGGCCCGCGGACGCCGCAGGTCCAACGGATTCAAGGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12311:1960..5253-

>mRNA_L-elsbetiae_contig12311.1911.1 ID=mRNA_L-elsbetiae_contig12311.1911.1|Name=mRNA_L-elsbetiae_contig12311.1911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig12311:1960..5253- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTATTGATCTAGTGGCCGGTGGCCGACGTGTCGGACACAAGGTCCG
CACGTCGCCCAAGTCGGACAATGTGTACCTTGGACTGCTGGTTAAGCTCT
TCAGGTTCCTTGCCCGGAGGACGGACAGCGCGTTCGCCAAGGTGGTCCTC
AAGCGTCTGTATATGTCCAAGACCAACCGTGCGCCCCTGTCCCTCTCCCG
CCTGGCACGGTACATGAGGAACAAGGAGACCAGCACGGCTGTGCTTGTGG
GAACCGTGACGGATGACGTCCGCCTCCTCGAAGTACCCAAGCTGTCTGAT
GGGTATTGATCTAGTGGCCGGTGGCCGACGTGTCGGACACAAGGTCCGCA
CGTCGCCCAAGTCGGACAATGTGTACCTTGGACTGCTGGTTAAGCTCTTC
AGGTTCCTTGCCCGGAGGACGGACAGCGCGTTCGCCAAGGTGGTCCTCAA
GCGTCTGTATATGTCCAAGACCAACCGTGCGCCCCTGTCCCTCTCCCGCC
TGGCACGGTACATGAGGAACAAGGAGACCAGCACGGCTGTGCTTGTGGGA
ACCGTGACGGATGACGTCCGCCTCCTCGAAGTACCCAAGCTGTCTGTGTG
CGCTCTCAGGTTCACCGAGACCGCCCGCGCCCGCATCCTCGCCGCTGGCG
GAGAGTGCATCACCTTTGACCAGCTGGCGCTCCGGGCGCCTAAGGGCACC
AACACTGTGCTCCTCCGCGGCCCCAAGAACGCTCGCGAGGCTGTCAGGCA
CTTCGGCCACAGGACCACTGTGCGCTCTCAGGTTCACCGAGACCGCCCGC
GCCCGCATCCTCGCCGCTGGCGGAGAGTGCATCACCTTTGACCAGCTGGC
GCTCCGGGCGCCTAAGGGCACCAACACTGTGCTCCTCCGCGGCCCCAAGA
ACGCTCGCGAGGCTGTCAGGCACTTCGGCCACAGGACCACCGTCAACAAC
CTGCACACCCACGACTCCGTCAAGCCGTACGTGCGCTCCAAGGGGCGCAA
GTTCGAGAAGGCCCGCGGACGCCGCAGGTCCAACGGATTCAAGGTACGTC
AACAACCTGCACACCCACGACTCCGTCAAGCCGTACGTGCGCTCCAAGGG
GCGCAAGTTCGAGAAGGCCCGCGGACGCCGCAGGTCCAACGGATTCAAGG
TA
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