mRNA_L-elsbetiae_contig12303.1907.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 293 bits (750), Expect = 5.650e-88 Identity = 296/398 (74.37%), Postives = 327/398 (82.16%), Query Frame = 3 Query: 312 DLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 D IFE+LTS Q AELL+A LE AAAKG++DLAQRLVRAGA+ GDALH A+ GGH EIVSD ++ ASLAA D DG T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R + + P AA +GHVEILRA+I+HGADVDAV+ Q+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A QAG QGAAEVV+SL+RAGADETI N G+K D+IG VEEE RL ED ERV +LLANAP DR WRRRGYL++CRA PDRV + ++ SGTH A RTRSR K+ARA +AG+STVDE+TGGNWAVV+SKV+ LQEEGIFRTIVEYL Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 156 bits (395), Expect = 4.740e-38 Identity = 180/413 (43.58%), Postives = 216/413 (52.30%), Query Frame = 3 Query: 276 REALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVN---IDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 R ALRG E IFDL E T QWA L++ LE AA +G L ++LV AGA+ G A+H A+ GGH +I ++ GAS +A D +G T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R G+ + + I A +GHV+ +R +I+HGADVDA N + Y A +AG QG EVVD L+R GADET V +G + AD IG V EE R+ E+FE V KLLANAP DR WRRR LVLCRA PD++Q S ++AR E ++VL L EEGIFRTIV ++ Sbjct: 7 RGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL-----------------SSDRIARLE--------------------ARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 122 bits (305), Expect = 6.530e-26 Identity = 200/449 (44.54%), Postives = 249/449 (55.46%), Query Frame = 3 Query: 276 REALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---CGESQS--------------------------------PVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVE-EEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGD---STVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 R+ LRGA + DL+ T +WA LK PLE A G RDLA LVR GA++G A++EAI G E++S + GAS++A D +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R G +S P + +A V+ ++ +++ GAD+ + + XXXXXXXXXXXXXXXXXXXXXX AA AG QG+AE+VD L+R GADET + +G +PAD +G +E + L + V +LLANAP DR WRRRG LVLCRA+ R + Q G + RTRSR KLAR++ V T + TG W +V+ L+EEGIFR++V +L Sbjct: 6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--------------------------------AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 117 bits (293), Expect = 8.830e-25 Identity = 120/188 (63.83%), Postives = 146/188 (77.66%), Query Frame = 3 Query: 273 GREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQ 836 GR AL+GAEG FDL EVLT+ WAE+L+ PLE AAA+G+ L Q+L+RAGA G ALH A+ GH E+V++ ++ GA ++ KDT GST XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RCG + V+ +AA++GHV+ILRA++ HGADV AV+ D+ Sbjct: 22 GRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVDNDR 209
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 109 bits (272), Expect = 8.330e-22 Identity = 70/151 (46.36%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 1065 AGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDS----TVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 AG +GA EVVD L+R ADET + G P +++G E + + +RV KLL AP DR WRRRG LVLCRA+P+R+ Q S + TRSRTKL E+VAG S D T W+ ++ +VL L +EGIFRTIV YL Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 107 bits (267), Expect = 3.280e-21 Identity = 233/415 (56.14%), Postives = 271/415 (65.30%), Query Frame = 3 Query: 267 RSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGD-ALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQ-GAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 ++ +E ++G + DL+F+ + +E L APLE A G LA++LV+AGA+ G ALHE + GH + ++ GAS+ + D T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R E + + AA HVEI+R +IDHG +V N D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + G+A+VVD L+R GADETIV+ G+ AD IG ED ER LLA AP DR WRRRG LVLCRA+PDR+Q G ++G VAG GG L+E G+FRTIV YL Sbjct: 16 KAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGL--------------------VAG-------VGG-----------LEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 103 bits (256), Expect = 8.030e-20 Identity = 198/414 (47.83%), Postives = 232/414 (56.04%), Query Frame = 3 Query: 267 RSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGD-ALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505 ++ +E L+G E + DL+ + + +E L APLE A A+G LAQ+LV+AGA+ G ALHEA+ GH I ++ GAS+ + D T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R E + AA VEILR +IDHG +V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A +G+ +VV L+R GADETIV G AD IG +D ER LL AP DR WRRRG LVLC AYPDR+Q GG+ A ++ +VL L+E G+FRTIV YL Sbjct: 13 KAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ--------------------------------------LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 9.870e-17 Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 1056 ACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRA-YPD-RVQQGQVISGTHPAETAWRTRSRTKLARAE 1388 A +AG G AE+VD L+R GADET V+++G AD++ EE LAED +RV KLLA AP DR WRRRG+L+L RA YP RVQ G S A A RTRS + +RAE Sbjct: 630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAE 742
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 6.910e-15 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 1053 AACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEG--RLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTG 1427 AA QAG QG +VD L+R GADET +N DG A+V+G ++E +D ERV LL NAPVDR WRRRG+LVLCRA+ + ++ + S ++ + R RS + AR G+ D++ G Sbjct: 212 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAAS-SNASSNGPRVRSLSTGARISGAGGELREDDDKG 337
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 3.010e-14 Identity = 64/159 (40.25%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 1050 YAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAY----VEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARA--ERVAGDSTVDENTGG-NWAVVMSKVLLLQEEGIFRTIVEYL 1505 + AC A E+ L+R GADET ND+GD PADVIG Y V +E A D +R+ ++LA AP DR+WRRRG+LVL R+ P RVQ S + R K+AR E + GD EN +W ++ +L L+ +G+FR +V +L Sbjct: 356 HVACMHSNVAAVEL---LLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKA-DHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVN------RNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12303.1907.1 >prot_L-elsbetiae_contig12303.1907.1 ID=prot_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=421bp MPDPVPKRSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSback to top mRNA from alignment at L-elsbetiae_contig12303:2739..5484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12303.1907.1 ID=mRNA_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2746bp|location=Sequence derived from alignment at L-elsbetiae_contig12303:2739..5484- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12303:2739..5484- >mRNA_L-elsbetiae_contig12303.1907.1 ID=mRNA_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2526bp|location=Sequence derived from alignment at L-elsbetiae_contig12303:2739..5484- (Laminarionema elsbetiae ELsaHSoW15)back to top |