mRNA_L-elsbetiae_contig12303.1907.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12303.1907.1
Unique NamemRNA_L-elsbetiae_contig12303.1907.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 5.650e-88
Identity = 296/398 (74.37%), Postives = 327/398 (82.16%), Query Frame = 3
Query:  312 DLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            D IFE+LTS Q AELL+A LE AAAKG++DLAQRLVRAGA+ GDALH A+ GGH EIVSD ++  ASLAA D DG T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R  + + P    AA +GHVEILRA+I+HGADVDAV+  Q+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          A  QAG QGAAEVV+SL+RAGADETI N  G+K  D+IG  VEEE RL ED ERV +LLANAP DR WRRRGYL++CRA PDRV + ++ SGTH    A RTRSR K+ARA  +AG+STVDE+TGGNWAVV+SKV+ LQEEGIFRTIVEYL
Sbjct:    3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 4.740e-38
Identity = 180/413 (43.58%), Postives = 216/413 (52.30%), Query Frame = 3
Query:  276 REALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVN---IDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            R ALRG E  IFDL  E  T  QWA L++  LE AA +G   L ++LV AGA+ G A+H A+ GGH +I    ++ GAS +A D +G T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R G+ +   + I A +GHV+ +R +I+HGADVDA N   +                                                                         Y A +AG QG  EVVD L+R GADET V  +G + AD IG  V EE R+ E+FE V KLLANAP DR WRRR  LVLCRA PD++Q                  S  ++AR E                    ++VL L EEGIFRTIV ++
Sbjct:    7 RGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL-----------------SSDRIARLE--------------------ARVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 6.530e-26
Identity = 200/449 (44.54%), Postives = 249/449 (55.46%), Query Frame = 3
Query:  276 REALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---CGESQS--------------------------------PVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVE-EEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGD---STVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            R+ LRGA   + DL+    T  +WA  LK PLE A   G RDLA  LVR GA++G A++EAI  G  E++S  +  GAS++A D +G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R    G  +S                                P + +A     V+ ++ +++ GAD+   +  +                  XXXXXXXXXXXXXXXXXXXXXX                                AA  AG QG+AE+VD L+R GADET  + +G +PAD +G  +E  +  L  +   V +LLANAP DR WRRRG LVLCRA+  R +  Q   G      + RTRSR KLAR++ V       T +  TG  W     +V+ L+EEGIFR++V +L
Sbjct:    6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--------------------------------AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 8.830e-25
Identity = 120/188 (63.83%), Postives = 146/188 (77.66%), Query Frame = 3
Query:  273 GREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQ 836
            GR AL+GAEG  FDL  EVLT+  WAE+L+ PLE AAA+G+  L Q+L+RAGA  G ALH A+  GH E+V++ ++ GA ++ KDT GST     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RCG  +  V+ +AA++GHV+ILRA++ HGADV AV+ D+
Sbjct:   22 GRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVDNDR 209          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 8.330e-22
Identity = 70/151 (46.36%), Postives = 89/151 (58.94%), Query Frame = 3
Query: 1065 AGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDS----TVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            AG +GA EVVD L+R  ADET  +  G  P +++G    E   +  + +RV KLL  AP DR WRRRG LVLCRA+P+R+   Q  S    +     TRSRTKL   E+VAG S      D  T   W+ ++ +VL L +EGIFRTIV YL
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 3.280e-21
Identity = 233/415 (56.14%), Postives = 271/415 (65.30%), Query Frame = 3
Query:  267 RSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGD-ALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQ-GAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            ++ +E ++G    + DL+F+     + +E L APLE A   G   LA++LV+AGA+ G  ALHE +  GH  +    ++ GAS+   + D  T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R  E +   +  AA   HVEI+R +IDHG +V   N D +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G + G+A+VVD L+R GADETIV+  G+  AD IG          ED ER   LLA AP DR WRRRG LVLCRA+PDR+Q G  ++G                     VAG        GG           L+E G+FRTIV YL
Sbjct:   16 KAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGL--------------------VAG-------VGG-----------LEEVGVFRTIVLYL 391          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 8.030e-20
Identity = 198/414 (47.83%), Postives = 232/414 (56.04%), Query Frame = 3
Query:  267 RSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRAGAQSGD-ALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVVMSKVLLLQEEGIFRTIVEYL 1505
            ++ +E L+G E  + DL+ +     + +E L APLE A A+G   LAQ+LV+AGA+ G  ALHEA+  GH  I    ++ GAS+   + D  T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R  E     +  AA    VEILR +IDHG +V+                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A     +G+ +VV  L+R GADETIV   G   AD IG          +D ER   LL  AP DR WRRRG LVLC AYPDR+Q                                       GG+ A ++ +VL L+E G+FRTIV YL
Sbjct:   13 KAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ--------------------------------------LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.870e-17
Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 3
Query: 1056 ACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRA-YPD-RVQQGQVISGTHPAETAWRTRSRTKLARAE 1388
            A +AG  G AE+VD L+R GADET V+++G   AD++    EE   LAED +RV KLLA AP DR WRRRG+L+L RA YP  RVQ G   S    A  A RTRS  + +RAE
Sbjct:  630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAE 742          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 6.910e-15
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 3
Query: 1053 AACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAYVEEEG--RLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTG 1427
            AA QAG QG   +VD L+R GADET +N DG   A+V+G ++E        +D ERV  LL NAPVDR WRRRG+LVLCRA+  + ++ +  S ++ +    R RS +  AR     G+   D++ G
Sbjct:  212 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAAS-SNASSNGPRVRSLSTGARISGAGGELREDDDKG 337          
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.010e-14
Identity = 64/159 (40.25%), Postives = 88/159 (55.35%), Query Frame = 3
Query: 1050 YAACQAGIQGAAEVVDSLMRAGADETIVNDDGDKPADVIGAY----VEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYPDRVQQGQVISGTHPAETAWRTRSRTKLARA--ERVAGDSTVDENTGG-NWAVVMSKVLLLQEEGIFRTIVEYL 1505
            + AC      A E+   L+R GADET  ND+GD PADVIG Y    V +E   A D +R+ ++LA AP DR+WRRRG+LVL R+ P RVQ     S  +      R     K+AR   E + GD    EN    +W  ++  +L L+ +G+FR +V +L
Sbjct:  356 HVACMHSNVAAVEL---LLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKA-DHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVN------RNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12303.1907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE5.650e-8874.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI4.740e-3843.58Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FYD0_ECTSI6.530e-2644.54Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D8LL12_ECTSI8.830e-2563.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G981_ECTSI8.330e-2246.36Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G1U1_ECTSI3.280e-2156.14Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G137_ECTSI8.030e-2047.83Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE9.870e-1753.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI6.910e-1543.31Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LB27_ECTSI3.010e-1440.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12303contigL-elsbetiae_contig12303:2739..5484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score160.2
Seed ortholog evalue2.1e-36
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size2429
Cds size1263
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12303.1907.1prot_L-elsbetiae_contig12303.1907.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12303 3977..5239 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815428.6664283-UTR-L-elsbetiae_contig12303:2738..36541622815428.6664283-UTR-L-elsbetiae_contig12303:2738..3654Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 2739..3654 -
1691682893.5080922-UTR-L-elsbetiae_contig12303:2738..36541691682893.5080922-UTR-L-elsbetiae_contig12303:2738..3654Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 2739..3654 -
1622815428.690732-UTR-L-elsbetiae_contig12303:3971..39761622815428.690732-UTR-L-elsbetiae_contig12303:3971..3976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 3972..3976 -
1691682893.518439-UTR-L-elsbetiae_contig12303:3971..39761691682893.518439-UTR-L-elsbetiae_contig12303:3971..3976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 3972..3976 -
1622815428.71442-UTR-L-elsbetiae_contig12303:5239..54841622815428.71442-UTR-L-elsbetiae_contig12303:5239..5484Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 5240..5484 -
1691682893.5352592-UTR-L-elsbetiae_contig12303:5239..54841691682893.5352592-UTR-L-elsbetiae_contig12303:5239..5484Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12303 5240..5484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815428.701546-CDS-L-elsbetiae_contig12303:3976..52391622815428.701546-CDS-L-elsbetiae_contig12303:3976..5239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12303 3977..5239 -
1691682893.5266192-CDS-L-elsbetiae_contig12303:3976..52391691682893.5266192-CDS-L-elsbetiae_contig12303:3976..5239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12303 3977..5239 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12303.1907.1

>prot_L-elsbetiae_contig12303.1907.1 ID=prot_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=421bp
MPDPVPKRSGREALRGAEGLIFDLIFEVLTSGQWAELLKAPLERAAAKGS
RDLAQRLVRAGAQSGDALHEAIHGGHGEIVSDFVQGGASLAAKDTDGSTA
LHVAARRGKAEMVQLLLPKGADKDAFDNQEWTPLYLAACHGNLAAVLALL
TAGADVSLRCGESQSPVIQIAAQQGHVEILRAVIDHGADVDAVNIDQQTA
LHYAADNYNAEATDVLVKAGANIEARGRLGCTPLHHASINLSREPLLCLL
KHGASVNAQDNDLQTPLFYAACQAGIQGAAEVVDSLMRAGADETIVNDDG
DKPADVIGAYVEEEGRLAEDFERVLKLLANAPVDRTWRRRGYLVLCRAYP
DRVQQGQVISGTHPAETAWRTRSRTKLARAERVAGDSTVDENTGGNWAVV
MSKVLLLQEEGIFRTIVEYL*
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mRNA from alignment at L-elsbetiae_contig12303:2739..5484-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12303.1907.1 ID=mRNA_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2746bp|location=Sequence derived from alignment at L-elsbetiae_contig12303:2739..5484- (Laminarionema elsbetiae ELsaHSoW15)
CGACAGTTTGCCGGAGGCGAAGAGCGTTAGAGATCCGAGCTGTGTACCTC ACAGTCTGGTGCTTCCAGACTGCCTGGACTGGTTGCTATACTATCTATGA GCTCCGCCAACGAAGGTATACTTGCTTTCTCAAAAAGTGCAAGACTAAAC GCACAGCCATAGTGCCACCAACTTCAACAACACGTCCGCCGCCGTCGACG TCTGCAGCAGTGCAGACTCCGCCTACCGATTAGCAGGCACCGATCATGCC AGACCCAGTGCCGAAAAGGAGCGGACGGGAGGCACTTCGAGGAGCAGAGG GGCTTATATTTGATCTCATCTTCGAAGTCCTCACATCGGGGCAGTGGGCG GAGTTGCTGAAGGCTCCACTCGAGCGTGCCGCCGCCAAGGGCAGCAGAGA CCTCGCACAGAGGCTGGTGAGGGCAGGAGCGCAGAGCGGGGATGCACTGC ACGAGGCCATTCACGGCGGGCATGGAGAGATCGTGAGCGACTTCGTGCAG GGTGGAGCGTCGCTCGCCGCCAAGGACACGGATGGCAGCACTGCTCTTCA CGTTGCTGCCCGACGGGGGAAGGCGGAGATGGTGCAGCTGTTGTTGCCCA AGGGGGCTGACAAAGATGCGTTTGACAACCAAGAATGGACACCGCTTTAT TTGGCAGCCTGCCATGGGAATTTAGCAGCCGTACTGGCTCTCTTGACTGC CGGCGCGGACGTGAGCCTTCGATGCGGCGAGTCCCAATCCCCAGTAATTC AGATAGCGGCTCAACAGGGGCATGTTGAGATATTGAGGGCTGTCATCGAC CATGGAGCGGACGTGGACGCCGTAAACATAGACCAACAAACAGCTCTTCA TTATGCCGCGGACAATTACAACGCCGAGGCCACCGATGTGCTCGTCAAGG CTGGGGCCAACATCGAAGCAAGAGGTCGTCTTGGCTGCACACCTCTTCAT CACGCTTCCATTAACCTCAGTCGCGAACCCTTGCTTTGCCTTTTGAAGCA TGGTGCGAGCGTCAACGCCCAAGATAATGACCTCCAAACACCCTTGTTTT ATGCAGCATGCCAAGCAGGAATACAAGGAGCTGCGGAGGTGGTGGACTCG CTGATGAGAGCAGGCGCGGACGAAACCATCGTTAACGATGACGGCGACAA ACCAGCGGATGTGATCGGGGCATATGTGGAAGAAGAGGGCCGTCTGGCCG AGGATTTCGAGCGCGTGCTTAAGCTATTGGCAAACGCTCCGGTGGACAGG ACATGGCGTCGCCGAGGCTACCTGGTCTTGTGCCGTGCGTACCCGGACAG GGTGCAGCAGGGCCAGGTGATCAGCGGCACCCATCCAGCCGAGACGGCAT GGAGGACTCGCAGCCGTACTAAGCTGGCAAGGGCAGAGAGGGTCGCGGGG GACAGCACGGTGGATGAGAACACTGGTGGCAACTGGGCTGTTGTCATGTC GAAGGTGCTTTTGTTGCAGGAGGAGGGCATATTCCGGACGATCGTGGAGT ACCTGTGAAGCCAGTGAGTTGAATGTGTGCGCAGCTTTAGTCACACCATA TACTTGTATACACAACAACTATAGGTTCTCCTTTATTTCGAACATACACA CGGTTATGCAAGCAGCATGTGTGCTCTTCGGATGTCAGGTTTTCGAAGAT GTGGAGTTGTGCACCGAACGGCTCATGACGTTGTTTGTGTTGGGTGCTCA AGATATCCCTACGACTGTTTGTCGCTGAGCTTGATGCCTCAACCAGAATC CTAAAAGAGGTGTGTAGAGGTTGTACCTTCAATGCATTGCTTTCGTGCCT TTCTCTTTGCCAACAAATTTATGTCGTCAGCGAGAGAAGCACAAGCAGCA GCAGCGGCAGCAGCAGCGGCGGCAGCGACACACCACTTTGGCGTGGAGGG CTTGGAGGACATGCATAACGACATAGCGGCGGCGATGGCCACGAGAGAGC GGGAGCCATATATGTTGACCGCGAAAACGATACGGCGGCGGCGGCGGCGG GCGCTGGTCCAGCGACAAGAACCGCAGCGGCGGGCTGGTTCGGCGCCGGT GATGCGGGCTTTCGAGACCCCCACGAGCCTGGCTGGGCGGGTCTGACGGC AACGGCGGTGCCCGAACGATTGTGTGCGCTATAAACAACGCGGCATGCTT TTTCGGCGTCACCGCAGCAGCGGCAGCAGCAGCATTCAGCGACGATGGTT TGCTTGGCTTCGCCGGGGCATTGGGGCCGGCGGCTGGAGACGAACGGAGG GAAATACCAGCAGCAGGCGCACCCGGTGGTAGTCGGTTGGGGATCAGATG AAGGGGGGGGAGTTACGGCGGTGCTGAGAGAGCGTCACGGTGCAGCGGGA TCGGCCGGGGCCGTGGGCCAGCTAGAGATGCTGACGAGCACTGTTGTCGC GCTGGAACGGTGTCTCAAGTTAACAAAGGGTTGGTTTGAGCGAGGAAGAG AGACGTCTCCGGCGAAGTCTGCTACAGCGGCGCGAGGGAGAGACTGATTT GTTTTTTTGCCCCATGTCAATGCGTGGATGACGGCCGCGGGCTTCTGCTC GCATCGTTGTACGACAGTACGGGTGATCGTGGTTCTCTTTTCTTTGGTTG GTCTCCGGCTAAGCATGATGGTATGTTCAGGCATGCACAGGGGTTGATTT TGTGTCGAGGGTTGTCGATCGGATGTTTCGTTTGTTGTGCGCGGGGTCGT TGATTGGTATGGTTTTTGCTGCATTGGTTCAACGCTCGTGAGTACT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12303:2739..5484-

>mRNA_L-elsbetiae_contig12303.1907.1 ID=mRNA_L-elsbetiae_contig12303.1907.1|Name=mRNA_L-elsbetiae_contig12303.1907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2526bp|location=Sequence derived from alignment at L-elsbetiae_contig12303:2739..5484- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAGACCCAGTGCCGAAAAGGAGCGGACGGGAGGCACTTCGAGGAGC
AGAGGGGCTTATATTTGATCTCATCTTCGAAGTCCTCACATCGGGGCAGT
GGGCGGAGTTGCTGAAGGCTCCACTCGAGCGTGCCGCCGCCAAGGGCAGC
AGAGACCTCGCACAGAGGCTGGTGAGGGCAGGAGCGCAGAGCGGGGATGC
ACTGCACGAGGCCATTCACGGCGGGCATGGAGAGATCGTGAGCGACTTCG
TGCAGGGTGGAGCGTCGCTCGCCGCCAAGGACACGGATGGCAGCACTGCT
CTTCACGTTGCTGCCCGACGGGGGAAGGCGGAGATGGTGCAGCTGTTGTT
GCCCAAGGGGGCTGACAAAGATGCGTTTGACAACCAAGAATGGACACCGC
TTTATTTGGCAGCCTGCCATGGGAATTTAGCAGCCGTACTGGCTCTCTTG
ACTGCCGGCGCGGACGTGAGCCTTCGATGCGGCGAGTCCCAATCCCCAGT
AATTCAGATAGCGGCTCAACAGGGGCATGTTGAGATATTGAGGGCTGTCA
TCGACCATGGAGCGGACGTGGACGCCGTAAACATAGACCAACAAACAGCT
CTTCATTATGCCGCGGACAATTACAACGCCGAGGCCACCGATGTGCTCGT
CAAGGCTGGGGCCAACATCGAAGCAAGAGGTCGTCTTGGCTGCACACCTC
TTCATCACGCTTCCATTAACCTCAGTCGCGAACCCTTGCTTTGCCTTTTG
AAGCATGGTGCGAGCGTCAACGCCCAAGATAATGACCTCCAAACACCCTT
GTTTTATGCAGCATGCCAAGCAGGAATACAAGGAGCTGCGGAGGTGGTGG
ACTCGCTGATGAGAGCAGGCGCGGACGAAACCATCGTTAACGATGACGGC
GACAAACCAGCGGATGTGATCGGGGCATATGTGGAAGAAGAGGGCCGTCT
GGCCGAGGATTTCGAGCGCGTGCTTAAGCTATTGGCAAACGCTCCGGTGG
ACAGGACATGGCGTCGCCGAGGCTACCTGGTCTTGTGCCGTGCGTACCCG
GACAGGGTGCAGCAGGGCCAGGTGATCAGCGGCACCCATCCAGCCGAGAC
GGCATGGAGGACTCGCAGCCGTACTAAGCTGGCAAGGGCAGAGAGGGTCG
CGGGGGACAGCACGGTGGATGAGAACACTGGTGGCAACTGGGCTGTTGTC
ATGTCGAAGGTGCTTTTGTTGCAGGAGGAGGGCATATTCCGGACGATCGT
GGAGTACCTGTGAATGCCAGACCCAGTGCCGAAAAGGAGCGGACGGGAGG
CACTTCGAGGAGCAGAGGGGCTTATATTTGATCTCATCTTCGAAGTCCTC
ACATCGGGGCAGTGGGCGGAGTTGCTGAAGGCTCCACTCGAGCGTGCCGC
CGCCAAGGGCAGCAGAGACCTCGCACAGAGGCTGGTGAGGGCAGGAGCGC
AGAGCGGGGATGCACTGCACGAGGCCATTCACGGCGGGCATGGAGAGATC
GTGAGCGACTTCGTGCAGGGTGGAGCGTCGCTCGCCGCCAAGGACACGGA
TGGCAGCACTGCTCTTCACGTTGCTGCCCGACGGGGGAAGGCGGAGATGG
TGCAGCTGTTGTTGCCCAAGGGGGCTGACAAAGATGCGTTTGACAACCAA
GAATGGACACCGCTTTATTTGGCAGCCTGCCATGGGAATTTAGCAGCCGT
ACTGGCTCTCTTGACTGCCGGCGCGGACGTGAGCCTTCGATGCGGCGAGT
CCCAATCCCCAGTAATTCAGATAGCGGCTCAACAGGGGCATGTTGAGATA
TTGAGGGCTGTCATCGACCATGGAGCGGACGTGGACGCCGTAAACATAGA
CCAACAAACAGCTCTTCATTATGCCGCGGACAATTACAACGCCGAGGCCA
CCGATGTGCTCGTCAAGGCTGGGGCCAACATCGAAGCAAGAGGTCGTCTT
GGCTGCACACCTCTTCATCACGCTTCCATTAACCTCAGTCGCGAACCCTT
GCTTTGCCTTTTGAAGCATGGTGCGAGCGTCAACGCCCAAGATAATGACC
TCCAAACACCCTTGTTTTATGCAGCATGCCAAGCAGGAATACAAGGAGCT
GCGGAGGTGGTGGACTCGCTGATGAGAGCAGGCGCGGACGAAACCATCGT
TAACGATGACGGCGACAAACCAGCGGATGTGATCGGGGCATATGTGGAAG
AAGAGGGCCGTCTGGCCGAGGATTTCGAGCGCGTGCTTAAGCTATTGGCA
AACGCTCCGGTGGACAGGACATGGCGTCGCCGAGGCTACCTGGTCTTGTG
CCGTGCGTACCCGGACAGGGTGCAGCAGGGCCAGGTGATCAGCGGCACCC
ATCCAGCCGAGACGGCATGGAGGACTCGCAGCCGTACTAAGCTGGCAAGG
GCAGAGAGGGTCGCGGGGGACAGCACGGTGGATGAGAACACTGGTGGCAA
CTGGGCTGTTGTCATGTCGAAGGTGCTTTTGTTGCAGGAGGAGGGCATAT
TCCGGACGATCGTGGAGTACCTGTGA
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