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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 5 |
Model size | 2534 |
Cds size | 1623 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815428.5711687-UTR-L-elsbetiae_contig12301:9..50 | 1622815428.5711687-UTR-L-elsbetiae_contig12301:9..50 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 10..50 - |
1691682893.4389608-UTR-L-elsbetiae_contig12301:9..50 | 1691682893.4389608-UTR-L-elsbetiae_contig12301:9..50 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 10..50 - |
1622815428.581371-UTR-L-elsbetiae_contig12301:598..724 | 1622815428.581371-UTR-L-elsbetiae_contig12301:598..724 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 599..724 - |
1691682893.4487576-UTR-L-elsbetiae_contig12301:598..724 | 1691682893.4487576-UTR-L-elsbetiae_contig12301:598..724 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 599..724 - |
1622815428.5909286-UTR-L-elsbetiae_contig12301:1455..1958 | 1622815428.5909286-UTR-L-elsbetiae_contig12301:1455..1958 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 1456..1958 - |
1691682893.4575894-UTR-L-elsbetiae_contig12301:1455..1958 | 1691682893.4575894-UTR-L-elsbetiae_contig12301:1455..1958 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 1456..1958 - |
1622815428.6002662-UTR-L-elsbetiae_contig12301:2009..2220 | 1622815428.6002662-UTR-L-elsbetiae_contig12301:2009..2220 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 2010..2220 - |
1691682893.466691-UTR-L-elsbetiae_contig12301:2009..2220 | 1691682893.466691-UTR-L-elsbetiae_contig12301:2009..2220 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 2010..2220 - |
1622815428.6287646-UTR-L-elsbetiae_contig12301:4471..4501 | 1622815428.6287646-UTR-L-elsbetiae_contig12301:4471..4501 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 4472..4501 - |
1691682893.4988883-UTR-L-elsbetiae_contig12301:4471..4501 | 1691682893.4988883-UTR-L-elsbetiae_contig12301:4471..4501 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12301 4472..4501 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815428.6097784-CDS-L-elsbetiae_contig12301:2220..2285 | 1622815428.6097784-CDS-L-elsbetiae_contig12301:2220..2285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12301 2221..2285 - |
1691682893.4773893-CDS-L-elsbetiae_contig12301:2220..2285 | 1691682893.4773893-CDS-L-elsbetiae_contig12301:2220..2285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12301 2221..2285 - |
1622815428.6190913-CDS-L-elsbetiae_contig12301:2913..4471 | 1622815428.6190913-CDS-L-elsbetiae_contig12301:2913..4471 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12301 2914..4471 - |
1691682893.487152-CDS-L-elsbetiae_contig12301:2913..4471 | 1691682893.487152-CDS-L-elsbetiae_contig12301:2913..4471 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12301 2914..4471 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12301.1906.1 >prot_L-elsbetiae_contig12301.1906.1 ID=prot_L-elsbetiae_contig12301.1906.1|Name=mRNA_L-elsbetiae_contig12301.1906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=541bp
MPSKCARQGCATRPSFGKARGKAEYCCDHAEDGMVNVNSKRCIHHGCTKQ PSFGKVDGKAEYCSGHAKGEMVDVLSKRCTRHGCTKRSSFGKEGGKAEYC RNHAEDGMLVAISKRCTHRGCTKRSSYGKADSKAEYCSGHARDGMVDVKS KRCIHGGCTKGASFGKVGGRAEYCSGHAKDGMVDVKKKRCTHHGCTKQPS FGKAGGKAEYCSGHSEDGMVNVRSKRCTRHGCTKTPSFGKAGSKAEYCRN HAGDGMVDVRSKKCIHGGCTKGPSFGKEGGKAEYCSGHAKDGMVDVINKR CIHGGCTKVPSFGKAGGKTEYCRNHANDEMVNVVGNRCTHRGCTKRPSFV QAGGKAEYCRGHSKGGMVDVVGKICVISGCTTTAHYGENNTGTREFCARH KEEGMVRVSGRSSGDTRTSGSTDNAAEMGSGASSRAGSAGKQGNRVPVPS AADGSSAESRKTNKRSADSADSHPVWVKSETVDNSVSDDDNSTVCPEADA QVKTEDMDVPCKGEPTEAADRVSVARMKRRKTTRGQARDS* back to topmRNA from alignment at L-elsbetiae_contig12301:10..4501- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig12301.1906.1 ID=mRNA_L-elsbetiae_contig12301.1906.1|Name=mRNA_L-elsbetiae_contig12301.1906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4492bp|location=Sequence derived from alignment at L-elsbetiae_contig12301:10..4501- (Laminarionema elsbetiae ELsaHSoW15) CAACAAAGAGCTCTAATAGCGACGGGGAGGATGCCTTCGAAATGTGCTCG
TCAGGGATGTGCCACGCGGCCGTCATTCGGCAAGGCACGCGGCAAGGCGG
AGTACTGCTGTGATCATGCTGAAGATGGGATGGTGAACGTGAACAGCAAG
AGGTGCATCCACCACGGTTGCACCAAGCAGCCGTCATTCGGCAAGGTAGA
CGGCAAGGCGGAGTACTGCAGTGGCCATGCTAAGGGCGAGATGGTGGACG
TTTTGAGCAAGAGATGCACCCGCCACGGTTGCACCAAGCGCTCGTCATTC
GGCAAGGAAGGTGGCAAGGCGGAGTACTGCCGTAACCATGCCGAAGATGG
GATGTTGGTCGCTATCAGCAAGAGGTGCACCCACCGCGGTTGCACCAAGC
GCTCGTCATACGGCAAGGCAGACAGCAAGGCGGAGTACTGCAGTGGCCAT
GCCCGGGACGGAATGGTGGACGTGAAAAGCAAGAGGTGCATCCACGGCGG
CTGCACCAAGGGGGCGTCGTTCGGCAAGGTCGGCGGCAGGGCGGAATACT
GCAGTGGCCATGCTAAGGACGGAATGGTGGACGTGAAAAAGAAAAGGTGC
ACCCACCACGGATGCACCAAGCAGCCGTCATTCGGCAAGGCAGGCGGCAA
GGCCGAGTACTGCAGTGGCCATTCTGAGGACGGGATGGTGAACGTGAGGA
GCAAGAGATGCACCCGCCACGGTTGCACCAAGACGCCGTCATTTGGCAAG
GCTGGTAGCAAGGCGGAGTACTGCCGTAACCATGCCGGAGATGGTATGGT
GGACGTGAGGAGCAAGAAGTGCATCCACGGCGGCTGCACCAAGGGGCCGT
CATTCGGCAAGGAAGGTGGCAAGGCGGAGTACTGCAGTGGCCATGCTAAG
GACGGGATGGTGGACGTTATCAACAAGAGGTGCATCCACGGCGGCTGCAC
CAAGGTGCCGTCATTCGGCAAGGCAGGCGGCAAGACGGAGTACTGCCGTA
ACCATGCCAACGACGAGATGGTGAATGTGGTAGGGAACAGATGCACCCAC
CGCGGTTGCACCAAGCGGCCGTCATTCGTCCAGGCAGGTGGCAAGGCAGA
GTACTGCAGGGGTCATTCTAAGGGCGGGATGGTGGACGTTGTCGGCAAGA
TATGCGTTATTTCTGGCTGCACCACAACGGCTCACTACGGTGAGAACAAC
ACTGGCACCCGGGAGTTCTGCGCACGACACAAAGAGGAAGGCATGGTCCG
TGTTTCTGGCCGGTCTAGCGGGGACACCCGAACAAGCGGTAGCACTGATA
ATGCGGCAGAAATGGGGAGCGGCGCTTCTAGCCGTGCTGGTTCTGCTGGA
AAGCAGGGGAACCGCGTTCCGGTGCCCTCCGCCGCAGATGGCTCCTCCGC
CGAGAGCAGGAAGACCAATAAGCGATCTGCTGATAGCGCGGACTCGCATC
CAGTTTGGGTGAAAAGCGAGACGGTCGACAACAGTGTGTCCGACGACGAT
AATTCTACGGTATGTCCGGAGGCAGATGCTCAAGTGAAGACCGAGGATAT
GGACGTGCCTTGCAAGGGGGAGCCGACAGAAGCTGCAGGTGCATTGAAGA
CTAGCTGTTGATGTCTCGTAGTGCTGTTGAATTTTTCAGGTTGGTGTAGA
AGAGAGACGACGATTGAAGGCAGACTCAGCTCCAAAAGTACGACGCATAA
CAACTGAAATGTCATGTAGACACCGCCCCTGCAGGGGTGAACGGCGATGA
GGCTCAGAAACAGCATTGTGGCCGGCTTGTCAGGTTTACTCACCTCGGTT
TACCGCTTGCTATCTATGCTTTGTGGGCGCTGAAGACCCACGTGCTACAC
TATCGTGTGATCGTATGGTACAGAGGAGGCGTGTTGCACTCGCTTCATGT
TTCGTTTTTCGGCCACCTACCCGTGTGTAAATTGAGCTGCCCAGCTTGAG
CTGCGGCGTTCAGTCTGTTCTTGTCTACCGTTGGGGCGGTTTTCTCTTTA
TCTTTCGCTGACATATGCTGGTTCGCACCCAAGTTTTTCTCAAATGCACA
GAGCTTCTGGTTACAATATTCAGCTTATCTACCGCACCACCATTTCACAT
GACAGGCATCAGCCCCCCCCCCGGCTTGTTTGTTTTGCATCTACGGTGAC
CTCATTTGCTTGCCTATCGTCTGGACGCGGCTCTTGTGCGCCTGCCCTCT
TTTCCAATCAATGCAGACCGGGTGAGCGTAGCGAGGATGAAGCGGAGAAA
GACCACGAGGGGGCAAGCGCGAGATTCCTGATGTCGCACTAACGGCAGCA
GCACCGCAGTATACGCGGCGAGCAATGGCGAGACAGGCTAGGCATAACCG
CCTGCGAACCGCGAATCCCCTACCAGCGTGTGATTGTAACATACCAGTAG
TGTGTTTTTTGTTGAGCGGCGTCGGCTGTCGTACATACGTGTTTTTTCAT
TCTCTTGTAAGCACGATAGACATACATACATGACAGAAATCGCCGTGAAT
ATTCAGGGTTTAGACTGGCATGTCGGTCATGTGGCTTTGTTCGTTTCTCT
TTTACTATATATTTTTTTTTTTTCCTGATTTTGGATCGCGTAATTTTCTT
GAATTCGGTTTTCGGTGTCCTGATGTTGCCGAGTTCGAAGGACGTCGCTT
GTGTATCACGGCCGACCCTTGGTAACACGATCTCGCTCCCTGGTGGGGGT
CCTGCTTGCGGCGCTAGATACATTCGGAAGTTGCACCTGCGTTTCAGACG
GCTACGCTTTTGGGCGTGTTATGCCCCTACGCTTATTTGTAGGTCCCAGC
ACTAAAACAGTGGCGAAGGCAGTAGTAGTCTTCGTGTTGAACCCATCCTG
AATTCCGAGTTTTGAGATTTGACGGTGGGGCGTGCAACCAGTAGTTTCCA
TCTTGCCTCATCCCGGCGGTAGGTGGAGGGCCGCCTGAGAAGCTTGGCCG
TGTCGGTCGACGATGGGAGGCAGATGGAGGGGGACTAGCGCATGACGCTC
GCGATGCAGAAGGGCGAGGCGGCGGCTGTGGCTAGTGGTGGCCGAGGTGA
GAGTTTACTCGCTACCGTGCACACCGGATGGTTGTAAACTGACAATACGA
ACCCTGAACCCTCCACACTACGGGGTACGGAATACGGTTTGTTTATATTT
TCGAGGAGCAGAGCAAGCGGTGATGTATATTACCCATGGCTGTTCTGGCC
ACATGCAATCGTGCGGCCGAGCCCTCCCCGCACACTGGAAACCCTGCCGG
TCTCGGACACACCGGCTCGCATGCATACGGCGCGAGACACGAAACGGCGG
GCGCCGACTGCTGGGGAGACTAGTGCGGTTTCAGTGCCAATCTGTGGCCT
GTGTGTTCCACCATCGCTTTTTCCCCACCATCACCCAATGGTTGTAGAGC
TGTTTGTTTTTGCCATGCCTCCTATTACCGCAAGCTCCAACGATAAGATC
GTGGTTGGTTGGCTCGTCGCCGCTCTCGAAACACGCGTTCCCCCCATTGA
AAAACGACACTAGCCTGAACCGATTGGTTGAGATTGTTTGTGGCTGCACC
AGTGCGTGTGTGTGTTTTCGTCCTGACTTTCACCATCCCAAAGCCGAGTA
AAAACTAACACCGCGTTGACAGACCGATTTGGCGCTCTCCCTCGCCCTTC
TACGCTTTAGTCACTCTTTGCAAGATATCAGCGAAGGCCATGATTCCAGC
GGGGCTTGTGTCAGAGGCTGTGTATATACGTGTTCTCCGTCGTTCCCGCG
CGTGCCGGCCGATGATGGGAACGGCAGCAGTGGCGGCAGCGGCGGCGGCG
GCAGTGGCTGGCGAGCGAGTATCCGTAGCAAGGATGGCCAAGAAGACAAG
GAGTGGGAGTTGGGACGGCGACCTCGGATCGAGAAGGTGCCGTACGCAGG
CAGGTAAGCAGCTGACCGTTGTACTCATTAAGTGTGTGTATCTATGTCTT
GCAGTACGTTGTCGGTGGAGGAGCGGGGGGTGGGGTTGCTTGTCTGCTGT
GTGCATGCGTGCAGGCGGTCTGTGGTCAGGAGGTGCGTGGATTTGCATTG
CATGGCACTATATCTGGCGGTTGGTTTGATGAGTGCGGTGGATGAACGCA
CGGCACGCCGGGTTGGTTGCACAGGTGCCTCCTGCTCTGGGTGATCTATG
CGAGACATTGTCGCTTTAGAACGGGTCTCGGTTGACACTTTTGTTCTGTC
AGAGGGTTTCCACCACCCATGTTTTTGCGAGTTTGGACTAGCGAAGGACA
GAGGAAGGGAGACCCAGCACACCCTGTTAACCTCACCAAGTTTTTATGTC
TGGGCGTACGGCTATGTGTTGGGAGCAGTTGAACGTGGTGGCAGATATGT
CGCCGTTTCCCTCGCCTCACTGCTCCCCCTCCTCCCCCCACGGGCATGTT
AATGATTTCCCTAGTTGAAAAGCCCTGCCTGCGTGACTGGCACTTGAACA
GGCTCGGATGGCTGAGGCAAGTGAGGCCGTAACCGCTGACAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig12301:10..4501- >mRNA_L-elsbetiae_contig12301.1906.1 ID=mRNA_L-elsbetiae_contig12301.1906.1|Name=mRNA_L-elsbetiae_contig12301.1906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3246bp|location=Sequence derived from alignment at L-elsbetiae_contig12301:10..4501- (Laminarionema elsbetiae ELsaHSoW15) ATGCCTTCGAAATGTGCTCGTCAGGGATGTGCCACGCGGCCGTCATTCGG CAAGGCACGCGGCAAGGCGGAGTACTGCTGTGATCATGCTGAAGATGGGA TGGTGAACGTGAACAGCAAGAGGTGCATCCACCACGGTTGCACCAAGCAG CCGTCATTCGGCAAGGTAGACGGCAAGGCGGAGTACTGCAGTGGCCATGC TAAGGGCGAGATGGTGGACGTTTTGAGCAAGAGATGCACCCGCCACGGTT GCACCAAGCGCTCGTCATTCGGCAAGGAAGGTGGCAAGGCGGAGTACTGC CGTAACCATGCCGAAGATGGGATGTTGGTCGCTATCAGCAAGAGGTGCAC CCACCGCGGTTGCACCAAGCGCTCGTCATACGGCAAGGCAGACAGCAAGG CGGAGTACTGCAGTGGCCATGCCCGGGACGGAATGGTGGACGTGAAAAGC AAGAGGTGCATCCACGGCGGCTGCACCAAGGGGGCGTCGTTCGGCAAGGT CGGCGGCAGGGCGGAATACTGCAGTGGCCATGCTAAGGACGGAATGGTGG ACGTGAAAAAGAAAAGGTGCACCCACCACGGATGCACCAAGCAGCCGTCA TTCGGCAAGGCAGGCGGCAAGGCCGAGTACTGCAGTGGCCATTCTGAGGA CGGGATGGTGAACGTGAGGAGCAAGAGATGCACCCGCCACGGTTGCACCA AGACGCCGTCATTTGGCAAGGCTGGTAGCAAGGCGGAGTACTGCCGTAAC CATGCCGGAGATGGTATGGTGGACGTGAGGAGCAAGAAGTGCATCCACGG CGGCTGCACCAAGGGGCCGTCATTCGGCAAGGAAGGTGGCAAGGCGGAGT ACTGCAGTGGCCATGCTAAGGACGGGATGGTGGACGTTATCAACAAGAGG TGCATCCACGGCGGCTGCACCAAGGTGCCGTCATTCGGCAAGGCAGGCGG CAAGACGGAGTACTGCCGTAACCATGCCAACGACGAGATGGTGAATGTGG TAGGGAACAGATGCACCCACCGCGGTTGCACCAAGCGGCCGTCATTCGTC CAGGCAGGTGGCAAGGCAGAGTACTGCAGGGGTCATTCTAAGGGCGGGAT GGTGGACGTTGTCGGCAAGATATGCGTTATTTCTGGCTGCACCACAACGG CTCACTACGGTGAGAACAACACTGGCACCCGGGAGTTCTGCGCACGACAC AAAGAGGAAGGCATGGTCCGTGTTTCTGGCCGGTCTAGCGGGGACACCCG AACAAGCGGTAGCACTGATAATGCGGCAGAAATGGGGAGCGGCGCTTCTA GCCGTGCTGGTTCTGCTGGAAAGCAGGGGAACCGCGTTCCGGTGCCCTCC GCCGCAGATGGCTCCTCCGCCGAGAGCAGGAAGACCAATAAGCGATCTGC TGATAGCGCGGACTCGCATCCAGTTTGGGTGAAAAGCGAGACGGTCGACA ACAGTGTGTCCGACGACGATAATTCTACGGTATGTCCGGAGGCAGATGCT CAAGTGAAGACCGAGGATATGGACGTGCCTTGCAAGGGGGAGCCGACAGA AGCTGCAGATGCCTTCGAAATGTGCTCGTCAGGGATGTGCCACGCGGCCG TCATTCGGCAAGGCACGCGGCAAGGCGGAGTACTGCTGTGATCATGCTGA AGATGGGATGGTGAACGTGAACAGCAAGAGGTGCATCCACCACGGTTGCA CCAAGCAGCCGTCATTCGGCAAGGTAGACGGCAAGGCGGAGTACTGCAGT GGCCATGCTAAGGGCGAGATGGTGGACGTTTTGAGCAAGAGATGCACCCG CCACGGTTGCACCAAGCGCTCGTCATTCGGCAAGGAAGGTGGCAAGGCGG AGTACTGCCGTAACCATGCCGAAGATGGGATGTTGGTCGCTATCAGCAAG AGGTGCACCCACCGCGGTTGCACCAAGCGCTCGTCATACGGCAAGGCAGA CAGCAAGGCGGAGTACTGCAGTGGCCATGCCCGGGACGGAATGGTGGACG TGAAAAGCAAGAGGTGCATCCACGGCGGCTGCACCAAGGGGGCGTCGTTC GGCAAGGTCGGCGGCAGGGCGGAATACTGCAGTGGCCATGCTAAGGACGG AATGGTGGACGTGAAAAAGAAAAGGTGCACCCACCACGGATGCACCAAGC AGCCGTCATTCGGCAAGGCAGGCGGCAAGGCCGAGTACTGCAGTGGCCAT TCTGAGGACGGGATGGTGAACGTGAGGAGCAAGAGATGCACCCGCCACGG TTGCACCAAGACGCCGTCATTTGGCAAGGCTGGTAGCAAGGCGGAGTACT GCCGTAACCATGCCGGAGATGGTATGGTGGACGTGAGGAGCAAGAAGTGC ATCCACGGCGGCTGCACCAAGGGGCCGTCATTCGGCAAGGAAGGTGGCAA GGCGGAGTACTGCAGTGGCCATGCTAAGGACGGGATGGTGGACGTTATCA ACAAGAGGTGCATCCACGGCGGCTGCACCAAGGTGCCGTCATTCGGCAAG GCAGGCGGCAAGACGGAGTACTGCCGTAACCATGCCAACGACGAGATGGT GAATGTGGTAGGGAACAGATGCACCCACCGCGGTTGCACCAAGCGGCCGT CATTCGTCCAGGCAGGTGGCAAGGCAGAGTACTGCAGGGGTCATTCTAAG GGCGGGATGGTGGACGTTGTCGGCAAGATATGCGTTATTTCTGGCTGCAC CACAACGGCTCACTACGGTGAGAACAACACTGGCACCCGGGAGTTCTGCG CACGACACAAAGAGGAAGGCATGGTCCGTGTTTCTGGCCGGTCTAGCGGG GACACCCGAACAAGCGGTAGCACTGATAATGCGGCAGAAATGGGGAGCGG CGCTTCTAGCCGTGCTGGTTCTGCTGGAAAGCAGGGGAACCGCGTTCCGG TGCCCTCCGCCGCAGATGGCTCCTCCGCCGAGAGCAGGAAGACCAATAAG CGATCTGCTGATAGCGCGGACTCGCATCCAGTTTGGGTGAAAAGCGAGAC GGTCGACAACAGTGTGTCCGACGACGATAATTCTACGGTATGTCCGGAGG CAGATGCTCAAGTGAAGACCGAGGATATGGACGTGCCTTGCAAGGGGGAG CCGACAGAAGCTGCAGACCGGGTGAGCGTAGCGAGGATGAAGCGGAGAAA GACCACGAGGGGGCAAGCGCGAGATTCCTGAACCGGGTGAGCGTAGCGAG GATGAAGCGGAGAAAGACCACGAGGGGGCAAGCGCGAGATTCCTGA back to top
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