mRNA_L-elsbetiae_contig123.1900.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: D8LIC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC6_ECTSI) HSP 1 Score: 251 bits (641), Expect = 3.090e-74 Identity = 158/226 (69.91%), Postives = 175/226 (77.43%), Query Frame = 1 Query: 25 MALSSASSTAAFAHQSPLAFAGPAFLAPAHLHASRQQQXXRWEQSCHXXXXXXQARRPRGFRGILSMSGEGGA--EAEASTAEVPEATKRLLEQAAKIRAEAEEMEVKFRKEQGIEDFKPSETKAMSAGDTARAAANADPSNLVSQAAAAASVSVKSTPETRAALISELDSLPPDSTRVIEKMGQLKADGLAPRWASFNYGNRYPISQGQLKMQTGLDGTSLAADG 696 M+LSS+SS AA LA+A PAFLAPA+L SR+QQ W ARRP R LSMS EGGA EAEASTAEVPEATKRLLEQAAKIRAEAE+MEV FRKEQGIEDFKPS K SAGDTARAAA ADPSN+VSQAAAAA+V+VKSTPE+RA L+ EL+ LPP S VIEKM +LK+ GLAPRW SF++G+RYPISQGQLKMQTGLDGT ADG Sbjct: 1 MSLSSSSSAAAT-----LAYAAPAFLAPANLKTSRRQQGGGWGSRS----SSLSARRP---RWALSMSAEGGADTEAEASTAEVPEATKRLLEQAAKIRAEAEQMEVNFRKEQGIEDFKPSGAKVSSAGDTARAAAKADPSNMVSQAAAAAAVTVKSTPESRAKLVEELEGLPPTSKEVIEKMAELKSGGLAPRWGSFDFGSRYPISQGQLKMQTGLDGTVGDADG 214
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: D7FLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX1_ECTSI) HSP 1 Score: 244 bits (623), Expect = 1.180e-73 Identity = 119/130 (91.54%), Postives = 126/130 (96.92%), Query Frame = 1 Query: 703 MDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDMAGRALKFTAEEVDQV 1092 MDDLKYALGFVCIFSF AVG G+AIGGNVGASFTYFFALLPI+FLGIGSTAPG+ITAVIN+VRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDM+GRA+KFT EEVDQ+ Sbjct: 1 MDDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDMSGRAMKFTPEEVDQL 130
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A835ZE95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE95_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.470e-73 Identity = 121/218 (55.50%), Postives = 159/218 (72.94%), Query Frame = 1 Query: 700 DMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDMAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALE 1353 ++DDLKYALG V FS AV G +GGN GAS TY FA++PI+FLGIGS++PGII A IN + + +++ RRV HEAAHFL+GYLCGLPIKSY DG TT +EF+D+AEGD A + T E+D VS+VA++GAV E + +ATG A DLD+LG++MN+T+PPM + Q+ Q RWA L AH+LL +E E +++ AF E K V+EC+AALE Sbjct: 2 NLDDLKYALGAVVAFSAISAVASGVIVGGNTGASLTYLFAIIPILFLGIGSSSPGIIVAAINLFKIRFDSEFQSRRVHHEAAHFLAGYLCGLPIKSYTVDGATTQIEFFDTAEGDQAVIGRQLTRPEIDPVSVVALAGAVAEVKKFGSATGSAQDLDSLGRLMNRTSPPMRDQAQEDQTRWAALTAHKLLGRYEKEFSALVTAFSEKKSVAECIAALE 219
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S3UVY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVY9_HETAK) HSP 1 Score: 226 bits (576), Expect = 2.350e-63 Identity = 117/273 (42.86%), Postives = 173/273 (63.37%), Query Frame = 1 Query: 556 IEKMGQLKADGLAPRWASFNYGNRYPISQGQLKMQTGLDGTSLAA-DGGDMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGD---MAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALEGAR 1362 +E +G LKADG+ W S Y ++ G++ TG++G L+ +GG+ DDL+++L VC+ SF A G G IGGNVGA+ TY FA++PI+FLG+GSTAPGIIT+ I + + D+ ERR+RHEAAHFL GY G PI+SY ++G VEFYD+ GD A A E+++ +++VAMSGAVGE + + A GG DL L + +T P + +Q S RW + AH++L+ + +++++AFRE + V EC+A +E + Sbjct: 132 LEALGGLKADGVVNTWKSKEV-TSYAVTIGRMTSATGIEGKDLSPLEGGNEDDLRWSLVVVCLGSFILAAGSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGIITSAIEGFKTNTDSDFNERRIRHEAAHFLVGYALGFPIRSYTSEGPACEVEFYDTPAGDDFAAARTAEALKKEQLEPLAVVAMSGAVGECLEFGNARGGQNDLVALQTLFTRTRPYVRADEQMSLTRWGVVEAHKVLTQNRAAYEALVQAFREKRSVQECIAIIESTK 403
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S2V1Y0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y0_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.210e-59 Identity = 114/269 (42.38%), Postives = 173/269 (64.31%), Query Frame = 1 Query: 565 MGQLKADGLAPRWASFNYGNRYPISQGQLKMQTGLDGTSLAAD-GGDMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGD--MAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALEGAR 1362 M +K +G+ W S ++ + QTG+ G L AD +DDLK+++ +V + SF AV G IGGNVGA+ TY FA++PI+FLG+GSTAPG+I+A I++V+ ++ ++ERRVRHEAAHFL GYL G PIKSYKA G T VEFYDS +GD +A + T E+V +++++M+G GE + Y A GG DL++L +++ NP + +QQ R + A+++L E ++V+++FR K V+EC+AA+E ++ Sbjct: 121 MVNMKEEGMITMWGS-EVAECRRVNMISMTSQTGIRGADLGADTSSTLDDLKFSILYVTMGSFALAVLSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGLISAGIDAVKSRADPTFDERRVRHEAAHFLVGYLLGYPIKSYKASGSTNEVEFYDSVDGDDYIANPGAQLTKEQVAPLAVISMAGIAGECLKYGDAKGGQADLNDLQSFLSRVNPYIRSDEQQDITRGGLVAAYKMLKDCSSEYEAVVESFRTKKAVNECIAAIETSK 388
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S2C0S6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0S6_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.710e-54 Identity = 115/277 (41.52%), Postives = 161/277 (58.12%), Query Frame = 1 Query: 541 DSTRVIEKMGQLKADGLAPRWASFNYGNRYPISQGQLKMQTGLDGTSLAADGGD-MDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDM--AGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALEGAR 1362 D+ + + LK G W + GQL+ + GLD +L D +D+LK AL V FS AV G +GGN GA+ TY FA+LPIIFLG+GSTAPG+I+AVI + + Y ERR++HEAAHFL GYLCG+PI+ Y DG V YD+ +G + A ++ T +E + +S+VAMSGAV E + A GG DL+ L +I+ + +PP+ Q Q RWA A RLL +H+ +S++ A + V+EC+A LE A+ Sbjct: 31 DAAEQVATLDALKESGDLRLWGVSQAPTFKATNIGQLQREYGLDAITLGLAAEDSLDELKAALFAVTAFSSIMAVLSGVVVGGNAGATLTYLFAVLPIIFLGVGSTAPGLISAVIEVGKTRLDPKYGERRIKHEAAHFLMGYLCGVPIQGYDVDGALPEVTLYDTRKGALTRAPMDMRLTRDEANGLSVVAMSGAVAEVNAMGDAKGGQQDLELLNKILQRVDPPLSPDQMQQQTRWAAAEAARLLKTHDGAYQSLVGALEQKCSVAECIAKLETAK 307
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S1GME8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME8_CYCTE) HSP 1 Score: 180 bits (456), Expect = 1.380e-46 Identity = 115/292 (39.38%), Postives = 166/292 (56.85%), Query Frame = 1 Query: 511 LISELDSLPPDSTRVIEKMGQLKADGLAPRWASFNYGNR---YPISQGQLKMQTG--LDGTSLAADG-GD--MDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYE--ERRVRHEAAHFLSGYLCGLPIKSYKA-DGGTTLVEFYDSAEGDMAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALE 1353 L+S +D D+++ EK+ L + G W S N YP+S G L +TG + G SL G GD MDD KYA V + V + + NVGA+ Y A++P++FLGIGS+AP +I VI + + D + +R RHEA HFL GYLCGLP+KSY D G VEFY S EG AG+ K T E+ +S+VAMSG+V E + + A GG DL L I +++ + ++QQ RW L+A+ LL+++ + + ++ AF++ K V+EC+A LE Sbjct: 94 LVSTIDFEGGDASQQYEKLSSLVSSGSLAIWNSANNDQMLRSYPVSLGFLSSRTGGKVTGESLGVAGEGDVGMDDFKYATVGVTLVCSVLGVAALAFLPENVGATVCYLVAVIPVLFLGIGSSAPALIANVIAQFKGTADDKEQRLDRICRHEAGHFLCGYLCGLPVKSYSLLDSGIPCVEFYPSQEGGSAGK--KLTQGEIAALSVVAMSGSVAEVIGFGNAKGGENDLIELESIFRRSDEFIGAQEQQDLTRWGALIAYELLTTNTAKYEKIVDAFKQKKSVAECIATLE 383
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S3V807_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V807_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.320e-45 Identity = 102/252 (40.48%), Postives = 150/252 (59.52%), Query Frame = 1 Query: 628 YPISQGQLKMQTG--LDGTSLAA---DGGDMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDD--YEERRVRHEAAHFLSGYLCGLPIKSYKA-DGGTTLVEFYDSAEGDMAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALEGA 1359 YP+S L+ +TG + T+L D ++D KYA +V S + + + N GA+F Y FAL+PI+FL +GS+APGII I + D E+R RHEA HFL GYLCGLPIKSY+A D G VEFY + +G+ AGR L+ +E+ +S+VAMSG+V E + + A GG++DL L + ++T M + QQ RW A+ ++SS+E + ++ AF+ K V+EC+AA+E + Sbjct: 162 YPVSLNFLEQRTGGKITATTLGVGQEDDVSLEDFKYATLWVTGGSTVAGIASLALLPENTGATFCYIFALIPILFLAVGSSAPGIIAGAIKGFKENKDDKAAQEDRICRHEAGHFLCGYLCGLPIKSYQANDSGIPCVEFYPTTDGNFAGRELE--EQEICAMSVVAMSGSVAEVLEFGEAKGGSSDLIQLNGLFSRTKDFMGAQAQQDMTRWGAYTAYNIISSNEDKFDRLVAAFKSKKSVTECIAAIEAS 411
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7S4MBA1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBA1_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.010e-44 Identity = 105/250 (42.00%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 628 YPISQGQLKMQTG--LDGTSLAADGG---DMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDYE--ERRVRHEAAHFLSGYLCGLPIKSYK-ADGGTTLVEFYDSAEGDMAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALE 1353 YP+S L+ ++G L G SL G +DD K A V + S A+ + + NVGA+ Y FAL+P+ F+GIGSTAPGII I+S + S D + +R RHEA HFL GYLCGLP+K Y D G VEF+ SAEG+ GR +FT+EE+ +S+VAMSG+V E +S+ A GG DL L +M ++ + + +Q RW L A L+ ++ + +++++AF+E K V++CVAA+E Sbjct: 156 YPVSLNFLEQRSGGKLTGESLGVSGEMDVSLDDFKDATIAVTLGSTVAAIASLALLPENVGATLCYLFALIPVGFIGIGSTAPGIIAGAISSFQGTSDDQAQRDDRICRHEAGHFLCGYLCGLPVKQYSIVDTGFPCVEFHPSAEGEALGR--EFTSEEIAALSVVAMSGSVAEVLSFGQARGGENDLLELNGLMRRSKEFIGAQKEQDLTRWGALAAFNLIQANMDKYEALVQAFKEKKSVADCVAAIE 403
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Match: A0A7R9VLF5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLF5_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.210e-43 Identity = 102/250 (40.80%), Postives = 150/250 (60.00%), Query Frame = 1 Query: 628 YPISQGQLKMQTG--LDGTSLAADGG---DMDDLKYALGFVCIFSFTCAVGFGSAIGGNVGASFTYFFALLPIIFLGIGSTAPGIITAVINSVRRKSQDDY--EERRVRHEAAHFLSGYLCGLPIKSYK-ADGGTTLVEFYDSAEGDMAGRALKFTAEEVDQVSIVAMSGAVGEAMSYETATGGATDLDNLGQIMNQTNPPMEGKDQQSQARWATLMAHRLLSSHEPELKSVMKAFREGKPVSECVAALE 1353 YP+S L+ ++G L G SL G +DD K A V + S A+ + + N+GA+ Y AL+P+ F+ IGSTAP II I S + + D E+R RHEA HFL GYLCGLP+K+Y D G VEF+ SAEG+ +GR +FT+EE+ +S+VAMSG+V E +S+ A GG DL L +M ++ + + +Q RW L A+ L+ ++ + + +++AF+E K V+ECVAA+E Sbjct: 4 YPVSLNFLEQRSGGKLTGESLGVSGEMDVTLDDFKDATIAVTLGSTILAIAALAVLPENIGATVCYLIALVPVGFIAIGSTAPSIIAGAIASFQGTADDQTQREDRICRHEAGHFLCGYLCGLPVKAYSIGDTGFPCVEFHPSAEGEASGR--EFTSEEIAALSVVAMSGSVAEVLSFGQAKGGENDLLELNGLMRRSKEFIGAQKEQDLTRWGALAAYNLIQANMDKYEVLVEAFKEKKSVAECVAAIE 251 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig123.1900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig123.1900.1 >prot_L-elsbetiae_contig123.1900.1 ID=prot_L-elsbetiae_contig123.1900.1|Name=mRNA_L-elsbetiae_contig123.1900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp MALSSASSTAAFAHQSPLAFAGPAFLAPAHLHASRQQQQQRWEQSCHSSSback to top mRNA from alignment at L-elsbetiae_contig123:6155..13211+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig123.1900.1 ID=mRNA_L-elsbetiae_contig123.1900.1|Name=mRNA_L-elsbetiae_contig123.1900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7057bp|location=Sequence derived from alignment at L-elsbetiae_contig123:6155..13211+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig123:6155..13211+ >mRNA_L-elsbetiae_contig123.1900.1 ID=mRNA_L-elsbetiae_contig123.1900.1|Name=mRNA_L-elsbetiae_contig123.1900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig123:6155..13211+ (Laminarionema elsbetiae ELsaHSoW15)back to top |