mRNA_L-elsbetiae_contig12297.1899.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 229 bits (585), Expect = 2.310e-73 Identity = 113/171 (66.08%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 1 TYTVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYA---NNEDDHDCSEAFELVASADEPNAGDE-GYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSA---GCTGGMVVNLCDKPSIGCKDS 492 TYTV+WTG GRFEIDLY CGSMCMEDSCG+WVTALCPYGE+GCPD++GD+DIVMPEP G S YKV ++ED DCS+AF L+AS D P+AG E GYFL ++SP+ GD A AGEEYT+E+DY+NG GS DRFSI LY A G G V ++CDKPSIGCKDS Sbjct: 36 TYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDS 206
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 224 bits (570), Expect = 4.100e-71 Identity = 107/168 (63.69%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 4 YTVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYANNEDDHD--CSEAFELVASADEPNAGDEGYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSAGCTGGM---VVNLCDKPSIGCKDS 492 YTV+WTGTT GRFEIDLY C S CM+D CG+WVTALCPYG DGCPDS GD+DI+MPEP GTS + N ED+ D CS+ F L+AS D P AG+ GY L ++SPS GD A+AGE YT+EWDYENGFGSS DRF++ LY G TG V LCD+PSIGC DS Sbjct: 37 YTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDS 204
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 222 bits (565), Expect = 2.350e-70 Identity = 111/171 (64.91%), Postives = 125/171 (73.10%), Query Frame = 1 Query: 1 TYTVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVY---ANNEDDHDCSEAFELVASADEPNAGDEGYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSAGC----TGGMVVNLCDKPSIGCKDS 492 TYTV+WTGT++ RFEIDLY CGS CMED CG+WVTALCPYG DGCPD+QGD+DIVMPEP GTS YKV +N+E CS F LVAS D P AG+ GY L ++SPS GD A+AG YT+EWDYENG GSS DRF+I LYS G G V LCDKPSIGC DS Sbjct: 36 TYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSG-YKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDS 205
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 219 bits (558), Expect = 4.060e-69 Identity = 108/172 (62.79%), Postives = 136/172 (79.07%), Query Frame = 1 Query: 1 TYTVKWTGTT-EGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYA---NNEDDHDCSEAFELVASADEPNAGDE-GYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSA---GCTGGMVVNLCDKPSIGCKDS 492 TYTV+WTGT+ + RFEIDLY CGSMCMED CG+WVTALCPYGEDGCPD++GD+DIVMPEP +GTSG YKV ++E+D DCS+ F L+AS++ P+ GDE G LE++SP++GD+A EYT+E+DY+NG GSS DRF+I LY A G G V ++CDKP+IGCKDS Sbjct: 36 TYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDS 207
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.100e-68 Identity = 107/173 (61.85%), Postives = 135/173 (78.03%), Query Frame = 1 Query: 1 TYTVKWTGTT-EGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYA---NNEDDHDCSEAFELVASADEPNAGDE-GYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSA---GCTGGMVVNLCDKPSIGCKDSS 495 TYTV+WTGT+ + RFEIDLY CGSMCMED CG+WVTALCPYGEDGCPD++GD+DIVMPEP GTSG YKV ++E+D DCS+ F L+AS++ P+ GDE G LE++SP++GD+A EYT+E+DY+NG GS DRF+I LY A G G V ++CDKP+IGCKDS+ Sbjct: 37 TYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSN 209
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 216 bits (550), Expect = 4.160e-68 Identity = 102/169 (60.36%), Postives = 131/169 (77.51%), Query Frame = 1 Query: 4 YTVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVY---ANNEDDHDCSEAFELVASADEPNAGDEGYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSAGCTGGM---VVNLCDKPSIGCKDS 492 YTV+WTG T GR++IDLY CGS+CMED CG+WVTALCPYG+DGCPD+QGD+D+VMPEP GTS YKV +++E D+ CS F L+AS + P+A D G ++ ++SPS GD A+AG EYT+E+DY+NG GSS +RF+I LYS+G +G V +CDKPSIGCKDS Sbjct: 37 YTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSG-YKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDS 204
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 216 bits (550), Expect = 8.470e-68 Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 4 YTVKWTGT-TEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYANNEDDHD---CSEAFELVASADEPNAGDEGY-FLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSA---GCTGGMVVNLCDKPSIGCKDS 492 YTV+WTGT + R+EIDLY CGSMCMED CG+WVTALCPYGEDGCPD++GD+DIVMPEP GTSG YKV + DD D CS+ F L+A A+ P+AGD G ++ ++SPS+GD A AGEEYT+E+DY+NG GSS RF+I LYSA G G + LCDKP+IGCKDS Sbjct: 25 YTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDS 195
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.430e-67 Identity = 108/171 (63.16%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 4 YTVKWTGT-TEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVYA---NNEDDHDCSEAFELVASADEPNAGDEGY-FLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSA---GCTGGMVVNLCDKPSIGCKDS 492 YTV+W+GT + RFEIDLY C SMCMED CGEWVTALCPYGEDGCPD++GD+DIVMPEP GTSG YKV ++ED DCS+ F L+A AD P+A D G ++ ++SPSTGD A AGEEYT+E+DY+NG GSS RF+I LY+A G G + LCDKP+IGCKDS Sbjct: 38 YTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDS 208
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE) HSP 1 Score: 176 bits (445), Expect = 5.700e-53 Identity = 89/146 (60.96%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 76 MEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVY---ANNEDDHDCSEAFELVASADEPNAGDEGYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSAGC----TGGMVVNLCDKPSIGCKDS 492 MED CG+WVTALCPYG DGCPD+QGD+DIVMPEP GTS YK+ +N+E CS F LVAS D P AG+ GY L ++SPS GD+A+AGE YT+EWDY NG GSS DRF+I LY+ G G V LCDKP+IGC DS Sbjct: 1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSG-YKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDS 145
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.990e-48 Identity = 87/168 (51.79%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 7 TVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGDFDIVMPEPEMGTSGMIYKVY---ANNEDDHDCSEAFELVASADEPNAGDEGYFLEISSPSTGDVAIAGEEYTIEWDYENGFGSSADRFSIMLYSAGCTGGM---VVNLCDKPSIGCKDS 492 TV+WTGT+ GRF+IDLY CGS+CMED CG+WVTALCPYG+DGCPD+QGD+D+VMPEP GTS YKV +++E D CS F LVASA +D++NGFGSS +RFSI LY +G +G V ++CDK SIGCKDS Sbjct: 38 TVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSG-YKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDS 204 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12297.1899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12297.1899.1 >prot_L-elsbetiae_contig12297.1899.1 ID=prot_L-elsbetiae_contig12297.1899.1|Name=mRNA_L-elsbetiae_contig12297.1899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp TYTVKWTGTTEGRFEIDLYKCGSMCMEDSCGEWVTALCPYGEDGCPDSQGback to top mRNA from alignment at L-elsbetiae_contig12297:190..2169- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12297.1899.1 ID=mRNA_L-elsbetiae_contig12297.1899.1|Name=mRNA_L-elsbetiae_contig12297.1899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig12297:190..2169- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12297:190..2169- >mRNA_L-elsbetiae_contig12297.1899.1 ID=mRNA_L-elsbetiae_contig12297.1899.1|Name=mRNA_L-elsbetiae_contig12297.1899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig12297:190..2169- (Laminarionema elsbetiae ELsaHSoW15)back to top |