mRNA_L-elsbetiae_contig12296.1898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12296.1898.1
Unique NamemRNA_L-elsbetiae_contig12296.1898.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: D8LQV8_ECTSI (Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV8_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 1.490e-69
Identity = 136/245 (55.51%), Postives = 158/245 (64.49%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713
            VAVSTSDK  Q++GV AANIFGFW  VGG++   VCSAV ++PI LHYG +IA+R    G+      F   P         G    W+      G        +A      R  +  +    ESNGKRVAQDG VLPF+AGEI F +PGTNGQHSFYQL HQG V PA F GYC SQCPV LEG PV NH+E +S FF +PD L Y +TAEEL+ +GVPE  RP KVFTGN+PSLSLLFPKLDAF
Sbjct:  245 VAVSTSDKLVQDFGVDAANIFGFWDWVGGRYS--VCSAVSVLPIALHYGFDIARRFLD-GAHDMDNHFLNEPPRQNIPVLMGLLGVWNSTFLGHGARALLPYSQALL----RFAAHIQQVDMESNGKRVAQDGSVLPFDAGEIGFGEPGTNGQHSFYQLIHQGGVFPADFGGYCTSQCPVLLEGDPVPNHEEFMSNFFAQPDVLAYAKTAEELEKEGVPEWFRPHKVFTGNRPSLSLLFPKLDAF 482          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A836C9A9_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.650e-61
Identity = 127/249 (51.00%), Postives = 154/249 (61.85%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWS--WASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719
            VAVSTS + CQ +GV AANIFGFW  VGG++   VCSAVG +P+ L YG +  K A   G+      F  +P         G    W+  +   AC     +     R        +  +    ESNGKRVA DG  LPFEAGE+ F +PGTNGQHSFYQL HQGR++P  F+GYC S  PV L G+PV NHDEL+S FF + DAL YG+TAE+   +GVPE LRP KVF GN+PS SLLFPKL+AF L
Sbjct:  247 VAVSTSVEKCQAFGVDAANIFGFWDWVGGRYS--VCSAVGALPLALQYGYDAVK-AFLAGAHDMDRHFLEAPLRQNLPVLLGVLGVWNSTFLGSACRALLPYSQALLRFA------AHIQQVDMESNGKRVAIDGTELPFEAGEVDFGEPGTNGQHSFYQLIHQGRIVPCDFLGYCESPAPVSLAGEPVTNHDELMSNFFAQADALAYGKTAEQCAEEGVPEPLRPHKVFPGNRPSSSLLFPKLNAFSL 486          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A6U2AQ63_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2AQ63_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.920e-58
Identity = 114/258 (44.19%), Postives = 155/258 (60.08%), Query Frame = 3
Query:    6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIA------------------KRASSPGST----TWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713
            AVST+++  +E+G+  ++IFGFW  VGG++   VCSAVG++P+++ YG ++                    R + P        W +TF   PS     +S A                    RR  +  +    ESNGKRV  DG  LP+ +GEI+F +PGTNGQHSFYQL HQGRV+PA F+G+C SQ P+ LEG+ V+NHDEL+S FF +PDAL YG+T  +L A+GVPE LRP KVF GN+PS S+L  +LDA+
Sbjct:   67 AVSTAEEQVKEFGIDESSIFGFWEWVGGRFS--VCSAVGLLPLSIQYGYDVLCSFLDGAHDMDEHFFDAPLRENIPVILGLLGVWNSTFLGYPSRALLPYSQA-------------------LRRLPAHIQQVDMESNGKRVGTDGFALPYPSGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQTPIQLEGESVSNHDELMSNFFAQPDALAYGKTLNDLAAEGVPEELRPHKVFPGNRPSSSILLTRLDAY 303          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S0BL51_9RHOD (Glucose-6-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL51_9RHOD)

HSP 1 Score: 203 bits (516), Expect = 3.830e-58
Identity = 119/246 (48.37%), Postives = 149/246 (60.57%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS-------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719
            VA+ST+ +   E+G+   NIFGFW  VGG++   VCSAVG+VP+ L YG E+     S         FS  P        G    W+ AS+   + R+       C    +     +    ESNGKRV  DG  L  +AG ++F +PGTNGQHSFYQL HQGRV+PA F+G+  SQ PV LEG+ VANHDEL+S FF +PDAL  G+TAEE  A+G+PE L P KVF GN+PS SLL  KLDAF L
Sbjct:    7 VAISTNTEKVVEFGIGEENIFGFWNWVGGRYS--VCSAVGVVPLALQYGFEVVASFLSGARAMDDHFFSAPPEANLPVLMGLVGVWN-ASYLGFSTRAL---LPYCQALLKLAPHIQQVDMESNGKRVKVDGSELQGDAGPVNFGEPGTNGQHSFYQLMHQGRVVPADFIGFKESQQPVELEGEVVANHDELMSNFFAQPDALALGKTAEECRAEGIPENLVPHKVFNGNRPSSSLLITKLDAFQL 246          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7R9UEX6_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEX6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.240e-57
Identity = 118/259 (45.56%), Postives = 149/259 (57.53%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYG------------------LEIAKRASSPGST----TWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713
            +A+S+  +    +G+   N+FGFW  VGG++   VCSAVG++P++LHYG                  LE A + + P        W  TF   PS     +S A                     R  +  +    ESNGKRV  DG VLP+  G I+F +PGTNGQHSFYQL HQGRVIPA F+G+C SQ PV LEG+ VANHDEL+S FF +PDAL  G+   EL+A+GVP  LRP K F GN+PSLSLLF KLDA+
Sbjct:  210 IALSSEVEKAAAFGILPENVFGFWNWVGGRFS--VCSAVGVMPLSLHYGYEAMGTFLAGAHNMDVHFLEAAPKENLPYLLGLIGVWNGTFLGHPSRAILPYSQA-------------------LARFAAHIQQVDMESNGKRVGMDGAVLPYSTGVINFGEPGTNGQHSFYQLIHQGRVIPAEFIGFCESQFPVNLEGEQVANHDELMSNFFAQPDALAMGKNLAELEAEGVPAELRPHKEFPGNRPSLSLLFQKLDAY 447          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S2PLU3_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLU3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.600e-56
Identity = 114/247 (46.15%), Postives = 153/247 (61.94%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719
            +AVST+      +GV  +NIFGFW  VGG++   VCSAVG+VP++LHY  EI     + G+      F  +P         G    W+      GT       +A     +R  +  +    ESNGKRVA DG  +PF+ GE++F +PGTNGQHSFYQL HQGRV+P  F+G+C SQ P  L+G+PV+NHDEL+S FF +PDAL +G+T  ++  +GVPE LR  KVFTGN+PS S+L  +LDAF +
Sbjct:  258 IAVSTAIDKAVAFGVQESNIFGFWDWVGGRFS--VCSAVGLVPLSLHYSYEIMSEFLN-GAHDMDEHFFNAPVRENIPIILGLLGVWNSTFLGYGTRALLPYSQA----LKRLPAHIQQVDMESNGKRVAMDGVPVPFQTGEVNFGEPGTNGQHSFYQLVHQGRVVPCDFIGFCQSQAPCELDGEPVSNHDELMSNFFAQPDALAFGKTLNDVIQEGVPEKLRAHKVFTGNRPSSSMLMTRLDAFAI 497          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A812QUA7_9DINO (Glucose-6-phosphate isomerase n=2 Tax=Sar TaxID=2698737 RepID=A0A812QUA7_9DINO)

HSP 1 Score: 205 bits (521), Expect = 3.160e-56
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGS-RPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713
            +AVS +   C+ +G+    IFGFW  VGG++   VCS+VG+VP+ L Y   I ++    G+      F T+P  R S+                      P   R +   +    ESNGKRV  DG VLPFEAGEI+F +PGTNGQHSFYQL HQGRV+P  F+G C SQ PV ++G+ VANHDEL+S FF +PDAL  G+T  EL+  GVP  LRP KVF GN+PS SLL P+L+AF
Sbjct:  262 IAVSAAVDKCRAFGIEDDAIFGFWDWVGGRYS--VCSSVGVVPLALQYSFPIVRQFLD-GAHDMDNHFRTTPLERVSQ------------------PPAAPALLRFAAHIQQVDMESNGKRVTVDGDVLPFEAGEINFGEPGTNGQHSFYQLIHQGRVVPCDFIGMCESQSPVYMKGEVVANHDELMSNFFAQPDALARGKTEAELEEAGVPAELRPHKVFPGNRPSSSLLLPRLNAF 478          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S2V3M3_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3M3_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.670e-56
Identity = 118/244 (48.36%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSP--------SGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713
            AVST+    +E+G+ + N+FGFW  VGG++   VCSAVG+VP++LHYG E+ ++  + G       F  +P         G    W+ +S+   + R+       C    R  +  +    ESNGKRV  DG VLPFE GE+ F +PGTNGQHSFYQL HQGRVIPA F+G+  SQ P+ L G+ V+NHDEL+S FF +PDAL  G+T +EL A+G PE L P K F GN+PSLSLLFP+LD F
Sbjct:  286 AVSTALDKTEEFGIDSNNVFGFWNWVGGRFS--VCSAVGMVPLSLHYGFEVMEQFLA-GCRDMDQHFLNAPIRQNIPVLMGLLGVWN-SSFLGYSSRAL---LPYCQALLRFPAHIQQVDMESNGKRVTTDGTVLPFETGELDFGEPGTNGQHSFYQLMHQGRVIPADFIGFIESQTPMHLPGEEVSNHDELMSNFFAQPDALACGKTVDELRAEGCPENLIPHKEFPGNRPSLSLLFPRLDPF 522          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S0C7V0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7V0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 4.570e-56
Identity = 115/246 (46.75%), Postives = 152/246 (61.79%), Query Frame = 3
Query:    6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719
            AVST+      +G++ +NIFGFW  VGG++   VCSAVGI+P++L Y   +     + G+      F T+P         G    W+       T       +A     +R  +  +    ESNGKRVA DG  +PF+ GEI+F +PGTNGQHSFYQL HQGRV+PA FVG+C SQ PV LEG+PV NHDEL+S FF +PDAL YG+T  +  A+G+PE LR  KVF+GN+PS S+L  +LDAF +
Sbjct:  136 AVSTAIPKATAFGISPSNIFGFWDWVGGRFS--VCSAVGILPLSLQYSSAVMAEFLN-GAHDIDEHFFTAPLRENIPVILGLLGVWNSTFMGYATRALLPYSQA----LKRLPAHIQQVDMESNGKRVAIDGTPVPFQTGEINFGEPGTNGQHSFYQLMHQGRVVPADFVGFCESQSPVELEGEPVTNHDELMSNFFAQPDALAYGKTLADCVAEGIPEELREHKVFSGNRPSSSMLLTRLDAFAI 374          
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S3VD10_9STRA (Glucose-6-phosphate isomerase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD10_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.840e-56
Identity = 113/243 (46.50%), Postives = 151/243 (62.14%), Query Frame = 3
Query:    3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCP----TRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719
            +AVST+   C  +G+  ANIFGFW  VGG++   VCSAVG+VP++L Y  ++   +   G+      F T+P                    G E     P     +R  +  +    ESNGKRV  +G  LPF+AGEI+F +PGTNGQHSFYQL HQGRV+PA F+G+  SQ P+ LEG+PV+NHDEL+S FF +PDAL YG+T  +++ +GVPE LR  KVF GN+PS S+L  +LDAF +
Sbjct:  320 IAVSTAIDSCVAFGIDEANIFGFWNWVGGRFS--VCSAVGVVPLSLQYSYDVMS-SFLDGAHNIDEHFFTAPLRENIPVILGLLGVWNSTFLGYETRALLPYSQALKRLPAHIQQVDMESNGKRVDIEGNPLPFQAGEINFGEPGTNGQHSFYQLMHQGRVVPADFIGFMESQAPISLEGEPVSNHDELMSNFFAQPDALAYGKTLNDVEQEGVPEELRQHKVFAGNRPSSSILMTRLDAFAI 559          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV8_ECTSI1.490e-6955.51Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
A0A836C9A9_9STRA1.650e-6151.00Glucose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A6U2AQ63_9STRA2.920e-5844.19Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota... [more]
A0A7S0BL51_9RHOD3.830e-5848.37Glucose-6-phosphate isomerase n=1 Tax=Rhodosorus m... [more]
A0A7R9UEX6_9STRA2.240e-5745.56Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcu... [more]
A0A7S2PLU3_9STRA1.600e-5646.15Glucose-6-phosphate isomerase n=1 Tax=Leptocylindr... [more]
A0A812QUA7_9DINO3.160e-5647.90Glucose-6-phosphate isomerase n=2 Tax=Sar TaxID=26... [more]
A0A7S2V3M3_9STRA3.670e-5648.36Glucose-6-phosphate isomerase n=1 Tax=Fibrocapsa j... [more]
A0A7S0C7V0_9STRA4.570e-5646.75Glucose-6-phosphate isomerase n=1 Tax=Proboscia in... [more]
A0A7S3VD10_9STRA4.840e-5646.50Glucose-6-phosphate isomerase (Fragment) n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12296contigL-elsbetiae_contig12296:1162..5289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.1
Seed ortholog evalue2.2e-17
Seed eggNOG ortholog2880.D8LQV8
Preferred namePGI
KEGG rclassRC00376,RC00563
KEGG koko:K01810
KEGG ReactionR02739,R02740,R03321
KEGG Pathwayko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00004,M00114
Hectar predicted targeting categoryother localisation
GOsGO:0002376,GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009987,GO:0010035,GO:0010038,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042866,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045087,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046686,GO:0046700,GO:0046939,GO:0050832,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0098542,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.glucose-6-phosphate isomerase activity
EggNOG OGsCOG0166@1,KOG2446@2759
EC5.3.1.9
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons6
Model size1380
Cds size336
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12296.1898.1prot_L-elsbetiae_contig12296.1898.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12296 3561..4654 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815427.1934526-UTR-L-elsbetiae_contig12296:1161..17041622815427.1934526-UTR-L-elsbetiae_contig12296:1161..1704Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 1162..1704 -
1691682892.7660537-UTR-L-elsbetiae_contig12296:1161..17041691682892.7660537-UTR-L-elsbetiae_contig12296:1161..1704Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 1162..1704 -
1622815427.2055755-UTR-L-elsbetiae_contig12296:2506..26871622815427.2055755-UTR-L-elsbetiae_contig12296:2506..2687Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 2507..2687 -
1691682892.7784264-UTR-L-elsbetiae_contig12296:2506..26871691682892.7784264-UTR-L-elsbetiae_contig12296:2506..2687Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 2507..2687 -
1622815427.216749-UTR-L-elsbetiae_contig12296:3430..35601622815427.216749-UTR-L-elsbetiae_contig12296:3430..3560Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 3431..3560 -
1691682892.7875671-UTR-L-elsbetiae_contig12296:3430..35601691682892.7875671-UTR-L-elsbetiae_contig12296:3430..3560Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 3431..3560 -
1622815427.2659895-UTR-L-elsbetiae_contig12296:4654..47471622815427.2659895-UTR-L-elsbetiae_contig12296:4654..4747Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 4655..4747 -
1691682892.8285575-UTR-L-elsbetiae_contig12296:4654..47471691682892.8285575-UTR-L-elsbetiae_contig12296:4654..4747Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 4655..4747 -
1622815427.275171-UTR-L-elsbetiae_contig12296:5192..52891622815427.275171-UTR-L-elsbetiae_contig12296:5192..5289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 5193..5289 -
1691682892.8369517-UTR-L-elsbetiae_contig12296:5192..52891691682892.8369517-UTR-L-elsbetiae_contig12296:5192..5289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12296 5193..5289 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815427.2294524-CDS-L-elsbetiae_contig12296:3560..36221622815427.2294524-CDS-L-elsbetiae_contig12296:3560..3622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 3561..3622 -
1691682892.800089-CDS-L-elsbetiae_contig12296:3560..36221691682892.800089-CDS-L-elsbetiae_contig12296:3560..3622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 3561..3622 -
1622815427.2425406-CDS-L-elsbetiae_contig12296:3913..40381622815427.2425406-CDS-L-elsbetiae_contig12296:3913..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 3914..4038 -
1691682892.8112092-CDS-L-elsbetiae_contig12296:3913..40381691682892.8112092-CDS-L-elsbetiae_contig12296:3913..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 3914..4038 -
1622815427.255984-CDS-L-elsbetiae_contig12296:4505..46541622815427.255984-CDS-L-elsbetiae_contig12296:4505..4654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 4506..4654 -
1691682892.8195543-CDS-L-elsbetiae_contig12296:4505..46541691682892.8195543-CDS-L-elsbetiae_contig12296:4505..4654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12296 4506..4654 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12296.1898.1

>prot_L-elsbetiae_contig12296.1898.1 ID=prot_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MDSHFLNEPLRQNIPVVMGLLGVWDPTILGHGARALLPYSQALLRFAAHR
HGEQRQARGPGRARASLRGRRNQLLEARHERSALLLPARPPGTGDPRTLR
GVLLVSVPGAA*
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mRNA from alignment at L-elsbetiae_contig12296:1162..5289-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12296.1898.1 ID=mRNA_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4128bp|location=Sequence derived from alignment at L-elsbetiae_contig12296:1162..5289- (Laminarionema elsbetiae ELsaHSoW15)
AGGTGGCGGTCAGCACGAGCGACAAGCATTGCCAAGAGTACGGAGTGGCG GCCGCCAACATCTTCGGCTTTTGGGGCTAGGTGGGAGGAAAGTGGAGGTG TGATATTGTTGTTCGGTGTCGAAATATAGGGACTATTGTTGTTATCGTTG TTATTGTCTGTTGCTGCTGCTGCTGCTGCCGTTGTCACGTTAAAGGGCGG TCTGGGAGAGCCCGCAGTTTCGAACATCCCCACAACCTCGTTGCAAGACT GTCAGATTCCTGCTACACTTTTTTTCTGTATGTATCTGCTTCTACAGGCC ATCAGGGTATATAAAGGAGTCTCGTACTCATGGAGCGTGTGCGCATCTGG CCTGTTTGCGGAGATCCCGCAGCAGCCTCACCCAGTTTGATACAACCGTC CCGACATCTTGACTCGAGCACGCTCATCTAACCGTACTGAGCTCCACCTT GGAGGCTTCGAGTAACAACCTCCCCCTCCTCCCCTCCCCCGCCCGTTTTT CACCTCGCGTACGCCCCTCCTCCCCTCTCCGCCCCGAAACAGGTAGAGGG TGTGCTCCGCTGTCGGGATCGTGCCCATCACCCTCCACTACGGTTTAGAG ATTGCGAAGCGTGCTTCCTCGCCAGGATCCACGACATGGACAGCCACTTT CTCAACGAGCCCCTCCGGCAGAACATCCCGGTGGTCATGGGCCTCCTGGG CGTGTGGGACCCCACGATCTTGGGGCACGGAGCGCGCGCGCTGCTGCCCT ACTCGCAGGCGCTGCTCCGGTTCGCGGCCCACAGGTTGGTGTGTTCGTGT GTGTGCTTTGTGTTGTTGCTTTGTGATGCGGTAATCTTGGGGGCTGCAGT AGCAGTGGTAGTGGGTTTGTGGCCGTGGTGTGTTGTGGTGCTGTCGGTGT TGGTGGCGGGCGGCGGCGATGTGTGCAGCGGTTATGCGGGCGTTATTTAC TTTGATGGTGGGTGGTGGTATTGTCGCGCTCGCACTTTCTGTGCCTATCC TTGACAAGTCCCTGACAGCGATAAATTGTTGCATGCTACCATGTGTGGCT CGGCTTCACCCTCAAGAAGGCAGGCATCCTCGTGCTGTGATTTGATCTAT CTCTCCCTCTACTTCTCCTTCACTCTCCCTCTCTCTATCTCTCTCCCACG CCCCCTTGTTCATCCCCCATCCCTCCCCTGCCTGCTGCCACTGCGGCACG CAAATTTTGGGGATTTTGTTTTGGGCTTCTCTCCCAAACAAAAAAAGGCA GGCACGGAGAGCAACGGCAAGCGCGTGGCCCAGGACGGGCCCGTGCTTCC CTTCGAGGCCGGAGAAATCAGCTTCTGGAAGCCCGGCACGAACGGTCAGC ACTCCTTCTACCAGCTCGCCCACCAGGTATTTTTATCTAAATCTACTGCT GTCCTAGTGACAGGACCAACCCCAGTCAAGGCTATTGCCGTATACGCACA TTGCATCGGCCTCGTGCGACGACGATAAGGGAACCAGCTGCGTACAAGGG GCTACGTGGATTCGCACGTCACTGTTTTAGTATACATCCCAGCTTCCCTT GAACGGACTTACTCCTGGCCATTGTCGTGCCCCAAAACAACCCGCCCCCG TCTCCAACAACGTATATACCGCATAAATTACGCGTACTTTCTCTCTGCCT CTCACACACTGAAACAGGGACGGGTGATCCCCGCACACTTCGTGGGGTAC TGCTAGTCTCAGTGCCCGGTGCCGCTTGAGGGGCAGCCGGTGGCCAACCA CGACGAGCTCATTTCCACCTTCTTCGAGGAGCCCGACGCTCTGGAGTACG GCAGGACCGCTGAGGAGCTTGACGCCAAGGGGGTGCCAGAGTAGCTGCGC CCGCGCAAGGTGAAAACTGGTGCTTTCGCTAGTAGCGGTGGTGGGTGTGA GTTCGTTTTGTATGCGTTTTTTTTCAGTGGTGGTGGTGGTGGTGGTGGTG TTGGTGGTGTTTGTTTTGTATATCGTCAGCAGTGGCGGTGGCGGGTATTG GTGTGACTTGTATATTTTTTTGTTTCAGTGGTGGTGGTGATTTTTGTTTT TTGTTTTTAGTCGGTGGTGATGGTGGTGGTGGTGGTGCGTTTTGTTTACT CGTCGTCGTGGCGGAGCGTAGTGCTGGCTTGCTTGGCACCACGTGAGACC TCATGTTTTTTCTGTAAGTGCATGAGATGCTCGGAGGTACCGATTTCAAT ACCACCGGTTTCCTTCCTATTCCGGGTGTGAGGACTATCCGGTGGGCACT TTATTCTTATGCCGCTTTGGGCTTCACCCACCCCCTGCCGCCGCCTGCTA CCCTCGAACACATAGAATCGAAAATTTGGGGCGAAATTTAGGAGGGACCC AATGACCACACGGCCAGCTGTCGCCGTGTTAGGGTATTGGGTTAGGTTTC CTGCCTTTGGAACTCTTGACAAAGCAGTGCGCAGCGGGAAGGTGTGTTTG TTCAACCTCGTAACTCCCCTTGACCCGTTGGATAAACATCCCATTCCTTG CGCATCCGCCCCGCCCTCCGCTGTTTTACACCTCCGCTCGCTCGCTCCCG CCCCGCCTTCAACCCCGGCTTTGCGTGTCTCTTTTTCTGTGAAAATCAAA AGGTGTTCACCGGGAACCAGCCGTCGTTGTCGCTGCTCTTCCCAAAGCTG GACGCCTTCCTTCTGCGGGCAGCTGCTGGCCGTCCACGAGCACCGTGCGG TGGTGCACGGCTTGATGTGGGGGCTCAACTCGTGCGACCAGTGGGAGTGG GGGGTGCAGCTCGGCAAGAAGCTGGCGAACGAGGCATGTGGTTGGATGTT TTTTTTGTTTTGGTTTGTTCGGTTTGGTGTCAAGTTGTGTGCAGTAGAGA GCACAGACTCATGCGTGTCTTGGCGTTGTTTCACGTTTCAAACCCCTCAA TAAGCGATGCCGCGTTTTTGCGTGTTCTCGCCATCAAACGGGAAATACCC CCATCAAAGCCTCTCAATAAACTAAAGACGGTGTGCGTGTATGTGTGTGT GGTTACTTTTTTTTTCTTACCTACTGCCGGTCGCCCCGGTGGTCTAGTGG TTAAACCTCGAACCCACTAGCAGCAAATTCTGGAGTTCAATCCCAAGCAG AATTGTTTCTTTCGCGACTTTGCAGGTGAAAGCGATAAAAGCTGAAAAGC TCGTGAGTACCAAACTTCGACGTAATCATGTTGACGAGGGAAAGGGATAG CTGAACCCTTCTTGCGATAAAACCCAAGGCAAGAACCGCAGGAGGAAGGT GGGGCAAAATAAGAAAAGAAAAAAAAGAAAAAAAAGCCCCGGTGTTCACC TCCCCCTGTGTGACCCCGGTTGGTTCTAGTTGTACATACAAATGCACTGC AAAGTGTAGTACCTCTAATCTAAGTACACCGCAAGGTGTAGTACATGTCT CCACTTGGGGGGACTGTCGCCAAAATAAATGGAAAGGACACACACACATA CCTATACGTTCACGCCCGTTTTTACTAGTGCTCGCACGAGGTTCCTCGCG GATTTGGGGAGTAAACATACACTACAGGGGTATATCTGAAACTTTCGTTC ATCCTCGTGGTGCTTTTTTTTTCTTTACTTACCAGGTGCGCCCTTTCGCT GTCTACCGCGCGCAACGCGGGTGGAGACGTCAAGGGCTTCAACCCGTCCA CCTCCAGCCTTATGGCCTACTACCTTGCCAACAGGCTTGCGCCCTAAGGT CGGCCGGGGTATTTATCTAGTGGCAGGCGGCAGACGGGGGAGAGGAGAGA TGGACATACGGTGTTGCGGTTGCGGGCAGCATGGAATGGCGCTGATGTCG GGAGAAGGTGTTCTCGCCCAGCCGCAGATATCAGGAAGGGGGAGGCGGCC GCGGCGGTGGTGTTCGTGTTATTGTACACTTTTAGTGTCCTGAAGGGAAG GCCTTGGTTGAGTTGCTTTATGTACGGAAGTGATATCTTGTTTTTGATAA TTGTGATCGCCCGGGCCACAGATGCATGTGGCGGAGAGGGGGTGCGTGCC GTGGATGAACTGTGGAATTTTGGATTCTGATGTTATCTTTTGAGAGAGAA AAAAGAGGAATTCATGTAGACGCATGCTGTGCCGCGAGGAGATGAGAACA AGCCTGTCTGGCTAACCGAGTGGGTTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12296:1162..5289-

>mRNA_L-elsbetiae_contig12296.1898.1 ID=mRNA_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig12296:1162..5289- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACAGCCACTTTCTCAACGAGCCCCTCCGGCAGAACATCCCGGTGGT
CATGGGCCTCCTGGGCGTGTGGGACCCCACGATCTTGGGGCACGGAGCGC
GCGCGCTGCTGCCCTACTCGCAGGCGCTGCTCCGGTTCGCGGCCCACAGA
TGGACAGCCACTTTCTCAACGAGCCCCTCCGGCAGAACATCCCGGTGGTC
ATGGGCCTCCTGGGCGTGTGGGACCCCACGATCTTGGGGCACGGAGCGCG
CGCGCTGCTGCCCTACTCGCAGGCGCTGCTCCGGTTCGCGGCCCACAGGC
ACGGAGAGCAACGGCAAGCGCGTGGCCCAGGACGGGCCCGTGCTTCCCTT
CGAGGCCGGAGAAATCAGCTTCTGGAAGCCCGGCACGAACGGTCAGCACT
CCTTCTACCAGCTCGCCCACCAGGCACGGAGAGCAACGGCAAGCGCGTGG
CCCAGGACGGGCCCGTGCTTCCCTTCGAGGCCGGAGAAATCAGCTTCTGG
AAGCCCGGCACGAACGGTCAGCACTCCTTCTACCAGCTCGCCCACCAGGG
ACGGGTGATCCCCGCACACTTCGTGGGGTACTGCTAGTCTCAGTGCCCGG
TGCCGCTTGAGGACGGGTGATCCCCGCACACTTCGTGGGGTACTGCTAGT
CTCAGTGCCCGGTGCCGCTTGA
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