mRNA_L-elsbetiae_contig12296.1898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: D8LQV8_ECTSI (Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV8_ECTSI) HSP 1 Score: 240 bits (612), Expect = 1.490e-69 Identity = 136/245 (55.51%), Postives = 158/245 (64.49%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713 VAVSTSDK Q++GV AANIFGFW VGG++ VCSAV ++PI LHYG +IA+R G+ F P G W+ G +A R + + ESNGKRVAQDG VLPF+AGEI F +PGTNGQHSFYQL HQG V PA F GYC SQCPV LEG PV NH+E +S FF +PD L Y +TAEEL+ +GVPE RP KVFTGN+PSLSLLFPKLDAF Sbjct: 245 VAVSTSDKLVQDFGVDAANIFGFWDWVGGRYS--VCSAVSVLPIALHYGFDIARRFLD-GAHDMDNHFLNEPPRQNIPVLMGLLGVWNSTFLGHGARALLPYSQALL----RFAAHIQQVDMESNGKRVAQDGSVLPFDAGEIGFGEPGTNGQHSFYQLIHQGGVFPADFGGYCTSQCPVLLEGDPVPNHEEFMSNFFAQPDVLAYAKTAEELEKEGVPEWFRPHKVFTGNRPSLSLLFPKLDAF 482
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A836C9A9_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A9_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.650e-61 Identity = 127/249 (51.00%), Postives = 154/249 (61.85%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWS--WASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719 VAVSTS + CQ +GV AANIFGFW VGG++ VCSAVG +P+ L YG + K A G+ F +P G W+ + AC + R + + ESNGKRVA DG LPFEAGE+ F +PGTNGQHSFYQL HQGR++P F+GYC S PV L G+PV NHDEL+S FF + DAL YG+TAE+ +GVPE LRP KVF GN+PS SLLFPKL+AF L Sbjct: 247 VAVSTSVEKCQAFGVDAANIFGFWDWVGGRYS--VCSAVGALPLALQYGYDAVK-AFLAGAHDMDRHFLEAPLRQNLPVLLGVLGVWNSTFLGSACRALLPYSQALLRFA------AHIQQVDMESNGKRVAIDGTELPFEAGEVDFGEPGTNGQHSFYQLIHQGRIVPCDFLGYCESPAPVSLAGEPVTNHDELMSNFFAQADALAYGKTAEQCAEEGVPEPLRPHKVFPGNRPSSSLLFPKLNAFSL 486
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A6U2AQ63_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2AQ63_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.920e-58 Identity = 114/258 (44.19%), Postives = 155/258 (60.08%), Query Frame = 3 Query: 6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIA------------------KRASSPGST----TWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713 AVST+++ +E+G+ ++IFGFW VGG++ VCSAVG++P+++ YG ++ R + P W +TF PS +S A RR + + ESNGKRV DG LP+ +GEI+F +PGTNGQHSFYQL HQGRV+PA F+G+C SQ P+ LEG+ V+NHDEL+S FF +PDAL YG+T +L A+GVPE LRP KVF GN+PS S+L +LDA+ Sbjct: 67 AVSTAEEQVKEFGIDESSIFGFWEWVGGRFS--VCSAVGLLPLSIQYGYDVLCSFLDGAHDMDEHFFDAPLRENIPVILGLLGVWNSTFLGYPSRALLPYSQA-------------------LRRLPAHIQQVDMESNGKRVGTDGFALPYPSGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQTPIQLEGESVSNHDELMSNFFAQPDALAYGKTLNDLAAEGVPEELRPHKVFPGNRPSSSILLTRLDAY 303
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S0BL51_9RHOD (Glucose-6-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL51_9RHOD) HSP 1 Score: 203 bits (516), Expect = 3.830e-58 Identity = 119/246 (48.37%), Postives = 149/246 (60.57%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS-------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719 VA+ST+ + E+G+ NIFGFW VGG++ VCSAVG+VP+ L YG E+ S FS P G W+ AS+ + R+ C + + ESNGKRV DG L +AG ++F +PGTNGQHSFYQL HQGRV+PA F+G+ SQ PV LEG+ VANHDEL+S FF +PDAL G+TAEE A+G+PE L P KVF GN+PS SLL KLDAF L Sbjct: 7 VAISTNTEKVVEFGIGEENIFGFWNWVGGRYS--VCSAVGVVPLALQYGFEVVASFLSGARAMDDHFFSAPPEANLPVLMGLVGVWN-ASYLGFSTRAL---LPYCQALLKLAPHIQQVDMESNGKRVKVDGSELQGDAGPVNFGEPGTNGQHSFYQLMHQGRVVPADFIGFKESQQPVELEGEVVANHDELMSNFFAQPDALALGKTAEECRAEGIPENLVPHKVFNGNRPSSSLLITKLDAFQL 246
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7R9UEX6_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEX6_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.240e-57 Identity = 118/259 (45.56%), Postives = 149/259 (57.53%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYG------------------LEIAKRASSPGST----TWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713 +A+S+ + +G+ N+FGFW VGG++ VCSAVG++P++LHYG LE A + + P W TF PS +S A R + + ESNGKRV DG VLP+ G I+F +PGTNGQHSFYQL HQGRVIPA F+G+C SQ PV LEG+ VANHDEL+S FF +PDAL G+ EL+A+GVP LRP K F GN+PSLSLLF KLDA+ Sbjct: 210 IALSSEVEKAAAFGILPENVFGFWNWVGGRFS--VCSAVGVMPLSLHYGYEAMGTFLAGAHNMDVHFLEAAPKENLPYLLGLIGVWNGTFLGHPSRAILPYSQA-------------------LARFAAHIQQVDMESNGKRVGMDGAVLPYSTGVINFGEPGTNGQHSFYQLIHQGRVIPAEFIGFCESQFPVNLEGEQVANHDELMSNFFAQPDALAMGKNLAELEAEGVPAELRPHKEFPGNRPSLSLLFQKLDAY 447
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S2PLU3_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLU3_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.600e-56 Identity = 114/247 (46.15%), Postives = 153/247 (61.94%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719 +AVST+ +GV +NIFGFW VGG++ VCSAVG+VP++LHY EI + G+ F +P G W+ GT +A +R + + ESNGKRVA DG +PF+ GE++F +PGTNGQHSFYQL HQGRV+P F+G+C SQ P L+G+PV+NHDEL+S FF +PDAL +G+T ++ +GVPE LR KVFTGN+PS S+L +LDAF + Sbjct: 258 IAVSTAIDKAVAFGVQESNIFGFWDWVGGRFS--VCSAVGLVPLSLHYSYEIMSEFLN-GAHDMDEHFFNAPVRENIPIILGLLGVWNSTFLGYGTRALLPYSQA----LKRLPAHIQQVDMESNGKRVAMDGVPVPFQTGEVNFGEPGTNGQHSFYQLVHQGRVVPCDFIGFCQSQAPCELDGEPVSNHDELMSNFFAQPDALAFGKTLNDVIQEGVPEKLRAHKVFTGNRPSSSMLMTRLDAFAI 497
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A812QUA7_9DINO (Glucose-6-phosphate isomerase n=2 Tax=Sar TaxID=2698737 RepID=A0A812QUA7_9DINO) HSP 1 Score: 205 bits (521), Expect = 3.160e-56 Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGS-RPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713 +AVS + C+ +G+ IFGFW VGG++ VCS+VG+VP+ L Y I ++ G+ F T+P R S+ P R + + ESNGKRV DG VLPFEAGEI+F +PGTNGQHSFYQL HQGRV+P F+G C SQ PV ++G+ VANHDEL+S FF +PDAL G+T EL+ GVP LRP KVF GN+PS SLL P+L+AF Sbjct: 262 IAVSAAVDKCRAFGIEDDAIFGFWDWVGGRYS--VCSSVGVVPLALQYSFPIVRQFLD-GAHDMDNHFRTTPLERVSQ------------------PPAAPALLRFAAHIQQVDMESNGKRVTVDGDVLPFEAGEINFGEPGTNGQHSFYQLIHQGRVVPCDFIGMCESQSPVYMKGEVVANHDELMSNFFAQPDALARGKTEAELEEAGVPAELRPHKVFPGNRPSSSLLLPRLNAF 478
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S2V3M3_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3M3_9STRA) HSP 1 Score: 205 bits (522), Expect = 3.670e-56 Identity = 118/244 (48.36%), Postives = 155/244 (63.52%), Query Frame = 3 Query: 6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSP--------SGRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAF 713 AVST+ +E+G+ + N+FGFW VGG++ VCSAVG+VP++LHYG E+ ++ + G F +P G W+ +S+ + R+ C R + + ESNGKRV DG VLPFE GE+ F +PGTNGQHSFYQL HQGRVIPA F+G+ SQ P+ L G+ V+NHDEL+S FF +PDAL G+T +EL A+G PE L P K F GN+PSLSLLFP+LD F Sbjct: 286 AVSTALDKTEEFGIDSNNVFGFWNWVGGRFS--VCSAVGMVPLSLHYGFEVMEQFLA-GCRDMDQHFLNAPIRQNIPVLMGLLGVWN-SSFLGYSSRAL---LPYCQALLRFPAHIQQVDMESNGKRVTTDGTVLPFETGELDFGEPGTNGQHSFYQLMHQGRVIPADFIGFIESQTPMHLPGEEVSNHDELMSNFFAQPDALACGKTVDELRAEGCPENLIPHKEFPGNRPSLSLLFPRLDPF 522
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S0C7V0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7V0_9STRA) HSP 1 Score: 201 bits (512), Expect = 4.570e-56 Identity = 115/246 (46.75%), Postives = 152/246 (61.79%), Query Frame = 3 Query: 6 AVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPS--------GRTSRWSWASWACGTPRSWGTERARCCPTRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719 AVST+ +G++ +NIFGFW VGG++ VCSAVGI+P++L Y + + G+ F T+P G W+ T +A +R + + ESNGKRVA DG +PF+ GEI+F +PGTNGQHSFYQL HQGRV+PA FVG+C SQ PV LEG+PV NHDEL+S FF +PDAL YG+T + A+G+PE LR KVF+GN+PS S+L +LDAF + Sbjct: 136 AVSTAIPKATAFGISPSNIFGFWDWVGGRFS--VCSAVGILPLSLQYSSAVMAEFLN-GAHDIDEHFFTAPLRENIPVILGLLGVWNSTFMGYATRALLPYSQA----LKRLPAHIQQVDMESNGKRVAIDGTPVPFQTGEINFGEPGTNGQHSFYQLMHQGRVVPADFVGFCESQSPVELEGEPVTNHDELMSNFFAQPDALAYGKTLADCVAEGIPEELREHKVFSGNRPSSSMLLTRLDAFAI 374
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Match: A0A7S3VD10_9STRA (Glucose-6-phosphate isomerase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD10_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.840e-56 Identity = 113/243 (46.50%), Postives = 151/243 (62.14%), Query Frame = 3 Query: 3 VAVSTSDKHCQEYGVAAANIFGFWG*VGGKWR*RVCSAVGIVPITLHYGLEIAKRASSPGSTTWTATFSTSPSGRTSRWSWASWACGTPRSWGTERARCCP----TRRRCSGSRPTGTESNGKRVAQDGPVLPFEAGEISFWKPGTNGQHSFYQLAHQGRVIPAHFVGYC*SQCPVPLEGQPVANHDELISTFFEEPDALEYGRTAEELDAKGVPE*LRPRKVFTGNQPSLSLLFPKLDAFLL 719 +AVST+ C +G+ ANIFGFW VGG++ VCSAVG+VP++L Y ++ + G+ F T+P G E P +R + + ESNGKRV +G LPF+AGEI+F +PGTNGQHSFYQL HQGRV+PA F+G+ SQ P+ LEG+PV+NHDEL+S FF +PDAL YG+T +++ +GVPE LR KVF GN+PS S+L +LDAF + Sbjct: 320 IAVSTAIDSCVAFGIDEANIFGFWNWVGGRFS--VCSAVGVVPLSLQYSYDVMS-SFLDGAHNIDEHFFTAPLRENIPVILGLLGVWNSTFLGYETRALLPYSQALKRLPAHIQQVDMESNGKRVDIEGNPLPFQAGEINFGEPGTNGQHSFYQLMHQGRVVPADFIGFMESQAPISLEGEPVSNHDELMSNFFAQPDALAYGKTLNDVEQEGVPEELRQHKVFAGNRPSSSILMTRLDAFAI 559 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12296.1898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12296.1898.1 >prot_L-elsbetiae_contig12296.1898.1 ID=prot_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp MDSHFLNEPLRQNIPVVMGLLGVWDPTILGHGARALLPYSQALLRFAAHRback to top mRNA from alignment at L-elsbetiae_contig12296:1162..5289- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12296.1898.1 ID=mRNA_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4128bp|location=Sequence derived from alignment at L-elsbetiae_contig12296:1162..5289- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12296:1162..5289- >mRNA_L-elsbetiae_contig12296.1898.1 ID=mRNA_L-elsbetiae_contig12296.1898.1|Name=mRNA_L-elsbetiae_contig12296.1898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig12296:1162..5289- (Laminarionema elsbetiae ELsaHSoW15)back to top |