mRNA_L-elsbetiae_contig12293.1895.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: D8LH69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH69_ECTSI) HSP 1 Score: 337 bits (864), Expect = 3.380e-112 Identity = 223/235 (94.89%), Postives = 229/235 (97.45%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTWA AQAAASDVGNWSTGGQASQAVS+ DLPSQT LK+RK+GQNSEAELRKR+VRAEVE+ ERRALDEKPATIARRYDEGGAGRG+DRLQLLLKEQGDVNLDDVKKYDD XXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK Sbjct: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 235
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A836C8J3_9STRA (Pre-mRNA-splicing factor Cwf15/Cwc15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J3_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.960e-39 Identity = 141/241 (58.51%), Postives = 166/241 (68.88%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEK----PATIARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXX--ALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW A ++ GNW+TGG + Q S+ D P LK+R+ GQNSEAEL++R+++ +E E A +EK PA + G A G D XXXXXXXXXXXXXXXXXXXXXXX AL+KELEKIR+ XXXXXXXXXXXXXXXX QEAAM+GN+LL+ + S+SQVKRRWNDDVVFKGQARTEP+ KKRFVNDTIR+DFHR FL KY+K Sbjct: 1 MTTAHRPTWTPAVGTSNARGNWATGGLSWQ-FSAKDEPGHKKLKFRQLGQNSEAELKRRDLKTVLEAKEENAKEEKRTGRPAAV-----HGDAKGGDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALQKELEKIRRXXXXXXXXXXXXXXXXXXXXXQEAAMSGNVLLSMAQSTSQVKRRWNDDVVFKGQARTEPQVKKRFVNDTIRSDFHRSFLKKYVK 235
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A7S2FJV3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJV3_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.660e-37 Identity = 124/240 (51.67%), Postives = 145/240 (60.42%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGR----GQDRLQLLLKEQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXAL-EKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW A + ASD GNWS GG+ S S D+P T LK R+ Q + R E+E E +ALDEK R E + G L L +E ++ +KYDD XXXXXXXXXXXXXXXXXXXXXX L ++ELEKI+ ERE +AA+ GN L+ + SSQVKR+WNDDVVFK QARTEPE KKRFVNDTIRNDFHRRFL K+ K Sbjct: 1 MTTAHRPTWVAGKGEASDYGNWSLGGKVSGQFSVKDMPGHTKLKMRQGEQIPDFVTRD-----ELESAEDKALDEKLKAKKRSALEDSSSSTVLGGAKPLMLKAEEVDTERIN--RKYDDGDXXXXXXXXXXXXXXXXXXXXXXELLQRELEKIKAEREKVRLEKEAEEAAIAEKTASDAALLGNPLMLGATKSSQVKRKWNDDVVFKNQARTEPEAKKRFVNDTIRNDFHRRFLAKFAK 233
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A8K1CHA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA0_PYTOL) HSP 1 Score: 140 bits (352), Expect = 1.800e-35 Identity = 128/242 (52.89%), Postives = 158/242 (65.29%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVK----KYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSS---QVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW AA ++ G W +GGQ SQ S+ DLP T LK R+ GQ + E+ R++RAE+E E++ +EK + D+ +L LL + D +K KYDDA XXXXXXXXXXXXXXXXXXX L +ELEKI+KE XXXXXXXXXX +E + GN L TQ+ S+S ++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KY++ Sbjct: 1 MTTAHRPTWHAAVGQKNE-GGWQSGGQVSQQFSARDLPGHTKLKIRQVGQGTANEIELRDLRAELEGREQQYEEEKGKSNNTAQDKLRRLEENKKLLLLGDAEADARESQLKSVASKYDDADDVXXXXXXXXXXXXXXXXXXXAELMRELEKIKKEXXXXXXXXXXXXREAAEKMAREEILQGNPL-TQAASASGTAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYVQ 240
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A2D4BX11_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX11_PYTIN) HSP 1 Score: 136 bits (342), Expect = 5.240e-34 Identity = 135/248 (54.44%), Postives = 163/248 (65.73%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATI------ARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVK----KYDDAXXXXXXXXXXXXXXXXXXXXXXXA-LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSS--QVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW AA S+ G W TGGQ SQ S+ DLP T LK R+ GQ + E+ R++RAE+E E++ +EK RR +E ++ LL + D +K KYDDA XXXXXXXXXXXXXXXXXXX A L +ELEKI+KE XXXXXXXXXXXXXXXX +E + GN L +S+ ++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KY++ Sbjct: 1 MTTAHRPTWHAAVGQKSE-GGWQTGGQVSQQFSARDLPGHTKLKLRQVGQGTANEVEARDLRAELEGREQQYEEEKSKNSDSVQARLRRLEE------NKKILLLGDAEADARESQLKSVASKYDDADDVXXXXXXXXXXXXXXXXXXXEAELMRELEKIKKEXXXXXXXXXXXXXXXXXXXXREEILQGNPLTAAQTASANAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLNKYVQ 241
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: K3WMS3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMS3_GLOUD) HSP 1 Score: 135 bits (341), Expect = 6.950e-34 Identity = 120/240 (50.00%), Postives = 150/240 (62.50%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVK----KYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW AA A++ G W GG S+ S+ DLP+ LKYR+ GQ + E+ ++RAE+E E + +EK D+ +L LL + D +K KYDDA XXXXXXXXXXXXX L +ELEKI++ XXXXXXXXXXXX + + GN LL QS+ S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL+KYI+ Sbjct: 1 MTTAHRPTWHAAVGQANE-GGWQAGGALSEQFSARDLPAHKKLKYRQVGQGTANEVELLDLRAELEGKEEKYEEEKGKKKDTALDKLRRLEENKKLLLLGDSEADARESQLKSIASKYDDADEIGDSDDSSXXXXXXXXXXXXXXLMRELEKIKRXXXXXXXXXXXXXXXASEQESRVEILQGNPLLQQSSGGSAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLSKYIQ 239
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: D0NV69_PHYIT (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=D0NV69_PHYIT) HSP 1 Score: 132 bits (332), Expect = 1.400e-32 Identity = 109/239 (45.61%), Postives = 138/239 (57.74%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLKEQGDVNLDDVK----KYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYI 702 MTTAHRPTW AA S+ G W GG+ S VS+ DLP+ LK R+ GQ + E+ ++R E+E E + EK D+ ++ LL + D +K KY+DA XXXXXXXXXXXXXXX L +ELEKI++ERE + +E + GN L Q + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI Sbjct: 1 MTTAHRPTWHAA-VGQSNEGGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEVEKGRKKDTAQDKLRRLEENKKILLLGDAEADAKESQLKEVASKYNDADDGAGSEAXXXXXXXXXXXXXXXELMRELEKIKQEREEERLRKEEEARKTVELQSREEILQGNPLTQQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYI 238
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A485KPE0_9STRA (Aste57867_10048 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPE0_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.890e-32 Identity = 116/243 (47.74%), Postives = 147/243 (60.49%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLK--EQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXA-LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQS-----NSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTA RPTW AA ++ G W+ GGQ S S+ DLP QT LK R+ GQ + EL ++++ E+ E ER+ +EK + + R ++ LLLK E D D V KYDDA XXXXXXXXXXXXXXX L +ELEKI+KE XXX X +++E + GN L + + S+ +KR+WNDDVVFK Q+R EPETKKRF+NDTIRNDFHRRFL YI+ Sbjct: 1 MTTAARPTWHAAVGQKNE-GGWNAGGQVSMQFSARDLPGQTKLKTRQIGQGTVDELGMKDLKGELSERERKYEEEKGKEVDTAQQK--MLRLKENKMLLLKGDEWEDRAKDVVAKYDDADDDTRQDSXXXXXXXXXXXXXXXXXLMRELEKIKKEXXXXXLXKEMVDREVEENQRKEEILLGNPLTSAQARNIPSGSATIKRKWNDDVVFKNQSRNEPETKKRFINDTIRNDFHRRFLKTYIQ 240
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A3F2RN91_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RN91_9STRA) HSP 1 Score: 130 bits (327), Expect = 7.360e-32 Identity = 125/253 (49.41%), Postives = 151/253 (59.68%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQD----RLQLLLKEQ-----GDVNLDD--------VKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTAHRPTW AA A++ G W GGQ S VS+ DLP LK R+ GQ + E+ ++R E+E E EK GR +D +L+ L K + GDV D KYDDA XXXXXXXXXXXXXX L +ELEKI++E XXXXXXXXXXXX + +E + GN L Q + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI+ Sbjct: 1 MTTAHRPTWHAAVGQANE-GGWQAGGQLSDQVSARDLPGHKHLKMRQVGQGTANEVELLDLRTELERKEETYEVEK-------------GRKKDTALEKLRRLEKNKKILLLGDVETDARESQLKNVASKYDDADDGGDSDGXXXXXXXXXXXXXXAELMRELEKIKQEXXXXXXXXXXXXXXVAEQQSREEVLQGNPLTQQQTAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYIQ 239
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Match: A0A067BVG0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVG0_SAPPC) HSP 1 Score: 129 bits (324), Expect = 1.850e-31 Identity = 111/239 (46.44%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 1 MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQNSEAELRKRNVRAEVEEGERRALDEKPATIARRYDEGGAGRGQDRLQLLLK--EQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSN--SSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705 MTTA RPT+ AA ++ G W++GGQ S S+ DLP T LK R+ GQ + EL +R++ E+ + ER+ ++K + + + R +D LLLK E D D KYDDA XXXXXXXXXXXXXXX L +ELEKI++ERE XX R ++ + GN L + S+ +KR+WNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL YI+ Sbjct: 1 MTTAARPTFNAAMGKKNE-GGWNSGGQISMQFSARDLPGHTKLKTRQLGQGTSDELAERDLIGELTDRERKYEEDKLKEVD--FAQQKIMRLKDNKTLLLKGDEWEDRAKDVQTKYDDADDDVGDXXXXXXXXXXXXXXXEAELMRELEKIKREREEERLRKEQAXXDEEEKRAKDEVLMGNPLTSAMAPAGSATIKRKWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLKAYIQ 236 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12293.1895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12293.1895.1 >prot_L-elsbetiae_contig12293.1895.1 ID=prot_L-elsbetiae_contig12293.1895.1|Name=mRNA_L-elsbetiae_contig12293.1895.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp MTTAHRPTWAAAQAAASDVGNWSTGGQASQAVSSWDLPSQTVLKYRKSGQback to top mRNA from alignment at L-elsbetiae_contig12293:1507..5500+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12293.1895.1 ID=mRNA_L-elsbetiae_contig12293.1895.1|Name=mRNA_L-elsbetiae_contig12293.1895.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3994bp|location=Sequence derived from alignment at L-elsbetiae_contig12293:1507..5500+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12293:1507..5500+ >mRNA_L-elsbetiae_contig12293.1895.1 ID=mRNA_L-elsbetiae_contig12293.1895.1|Name=mRNA_L-elsbetiae_contig12293.1895.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig12293:1507..5500+ (Laminarionema elsbetiae ELsaHSoW15)back to top |