mRNA_L-elsbetiae_contig1229.1891.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: D8LTK9_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK9_ECTSI) HSP 1 Score: 968 bits (2503), Expect = 0.000e+0 Identity = 572/1002 (57.09%), Postives = 660/1002 (65.87%), Query Frame = 1 Query: 292 YDIRIGQRNWQEYTPFGEARMNNHSEVADFLSASFVRLGGKCKGKXXXXXXXXXXXXXXXXXGPTTDGREGAESEGVELQ------QGGKV--GWDREMEEKAEGXXXXXXEERQRFYYVSVETLEASYSAPFKISADRVEELREGAEVEYLRKVAAVKGESLLGLSDYREAFQDEKFELDAHKLRQKAATTIQSGWRVRLARKRANRLRKDHRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFREDEAEIYRLHAGRILSRLVGRVYRGHLYGRKPARKLRAQREAASWGPSEWEAALYNAGEPLRTFYGWTGNWEAYLLQGSVDVIFYRNADTAEYTLDLPVEWQEQDAYDFYQREHARVYGFTAEEALAATVLQNAWRGKAARNNFQLLMRAQRICKGAEAAYLADPDSLRCQINYILFTHVIEKDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARAVAAGAAADPSQA-----PAEPYTSRRNPKQFALAEAGFFRFAAYNINDSESWHNYAACRQLAYGDYAGASEGYLKALEINPKDPKLQANYQALMDTFPDESQGSSTFESLTSHHMLQADSDKRRKDTASAKFLRRPEVKQAVLKIERAYLKSRQQQIDSFGSYLGPTGMLLREVQGEVLALQQDQVSAGSGSSGRDRQXXXPS-------TLMLTSPPGSGSSGSLLQSRTTASPSSAERSHRDSRNHAISGVKDGRIRVLALEEPESAREGFGTALKRPETTTDDASTAHN----PRPRGSPSSSP------LLLGWETADDGAGNTFYYNGSTGESRWDPPAPDVA-DASARVDKGDEE---QALSEPRE-------HDGGAAEA--ADEAERSHEDEALKQRVA-------LPAGWEAVDADDGGVYYYHVASGATQWEVPHGTHHAASGHEEGGEEPVGDTSVPTATTDGVAGWEEFKTDEGVPFWYNAASDESCWELPGDRAG 3147 YD+RIGQRNWQEYTPFGEARMNNHS+VA+FLS SFVRLGGK GP+ G GA + EL QGG GWD+EME+K +G +++QRFYYV+ ET E SY+APFKISADRVEELREGAEVEYLRKVA V GESLLGLSDYREAFQ+EK ELD HKLR +AA IQS WR R+AR ANR RK+ R A R RE EAE+ RL L+RLV RVYRGHLYGR+PAR+LRAQREA+ WGPSEWEAA ++AG+PLRTF+GWTG WEAYLLQGSVDV+FYRNA +AEYT DLP EWQ QDA+DFYQREH R++GFTAEEA AAT+LQ AWRGK +RN+F LLMRAQ+ICKGAEAAYLADPD+LR QINYILFTHVI+KDY+R+RILYTTA+ AME RGPDVQLLLFAFAIFC VTREED VSILATV RA+ AGAA D + P E YTSRRNPK+FALAEAGFFRFAAYN ND+ESWHNYAACRQLAYGDYAGASE YLKA+E NPKDPKLQANYQ LMDTFP+ SQGSSTFESL++HH QA++DKRR+DTASAKFL+RPEVKQAV+KIERAYL+SRQ+QID FG+YLGPTGMLLREVQGE LA Q++ ++ S+ R RQ L +S PG G LL A A+SG DGR + SA ++RP T D S + P G S P + GW+ A+D AGN +Y+N + + A VA DA+ G E + SE E +GG A A +AE + D L + V LP GWEAVD DG +YY+HV SG TQWEVP EEP T+ AT + WEEFKT+EGVPFWYN+++ ES W PG AG Sbjct: 240 YDVRIGQRNWQEYTPFGEARMNNHSQVAEFLSGSFVRLGGK---------------------GPSLGGNNGASTTIAELDDAQXXXQGGNEARGWDKEMEDKVQGWETEWDQDKQRFYYVNAETGETSYTAPFKISADRVEELREGAEVEYLRKVAPVNGESLLGLSDYREAFQEEKTELDTHKLRHQAAVVIQSCWRARMARIEANRRRKERRCASVINRQMRRFLGRCRRKRLGQVMSACLMLQKIVRGCMARRRHREGEAEMKRLRDANTLNRLVTRVYRGHLYGRRPARQLRAQREASWWGPSEWEAARHDAGDPLRTFFGWTGQWEAYLLQGSVDVMFYRNAASAEYTWDLPEEWQSQDAFDFYQREHTRIHGFTAEEAEAATLLQKAWRGKTSRNHFNLLMRAQKICKGAEAAYLADPDNLRSQINYILFTHVIDKDYNRSRILYTTALAAMEQRGPDVQLLLFAFAIFCFVTREEDFVSILATVERAIEAGAARDDADGIGRRWPPESYTSRRNPKRFALAEAGFFRFAAYNTNDAESWHNYAACRQLAYGDYAGASECYLKAIEKNPKDPKLQANYQTLMDTFPEHSQGSSTFESLSTHHQSQAENDKRRQDTASAKFLQRPEVKQAVIKIERAYLRSRQRQIDRFGTYLGPTGMLLREVQGEALAHQREHTASSPSSNNRGRQHDQRQQSVPPLPALSNSSSPGREPRGPLLLLPRAA-------------GSALSG-DDGR------SQGSSASARVHQGVERPYMTGSDTSRKESGPMVPALSGPSSDYPSRSLGLVPPGWDIAEDDAGNKYYFNAAAAGRDFSTQAAAVAGDAAHGQLSGGETVHTRRYSEIAESSHGTEKEEGGELPAFPAGDAENATTDAGLAEHVGGSEPPLPLPDGWEAVDVGDGSIYYHHVLSGLTQWEVPRE------------EEPHEITTAMAATPPDGSPWEEFKTEEGVPFWYNSSTGESSWSPPGHPAG 1188
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7S1TPL5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPL5_9STRA) HSP 1 Score: 159 bits (403), Expect = 7.390e-36 Identity = 89/245 (36.33%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 1285 DVIFYRNADTAEYTLDLPVEWQEQDAYDFYQREHARVYGFTAEEALAATVLQNAWRGKAARNNFQLLMRAQRICKGAEAAYLADPDSLRCQINYILFTHVIEKDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARA-VAAGAAADPSQAPAEPYTSRRNPKQFALAEAGFFRFAAYNINDSESWHNYAACRQLAYGDYAGASEGYLKALEINPKDPKLQANYQALM 2016 DV FY + T + D +W +QD + ++ GFT+E+ AA Q+ WR + R NF+L++ A+RI AYL +P+ + NY L+ + +DYDRAR+++ +++ M RGPD +LF +AIF +EED I+ V RA +A + DP P+ F +A+ GFFR AA +ND SWH YA CRQ Y D AGA E Y+K +E +P D ++ N + + Sbjct: 849 DVTFYCHTLTRRCSWDQTQDWLDQDKKEAHEHMQLSSKGFTSEQETAAIRFQSLWRARQIRRNFRLILTARRIMAECSDAYLRNPNDPVAKANYALYCQLFLQDYDRARMMWLSSMEYMVERGPDNAFVLFGWAIFLAQQQEEDWADIMHLVNRARIADRSGTDP------------RPRHFLMADLGFFRQAAIELNDGPSWHAYALCRQFVYDDVAGAEEAYVKGIERSPHDGRILENLETFV 1081
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A0P1B0S5_PLAHL (Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0S5_PLAHL) HSP 1 Score: 145 bits (367), Expect = 1.790e-31 Identity = 106/300 (35.33%), Postives = 145/300 (48.33%), Query Frame = 1 Query: 1081 RILSRLVGRVYRGHLYGRKPARKLRAQREAASWGPSEWEAALYNAGEPLRTFYGWTGNWEAYLLQGSVDVIFYRNADTAEYTLDLPVEWQEQDAYDFYQREHARVYGFTAEEALAATVLQNAWRGKAARNNFQLLMRAQRICKGAEAAYLADPDSLRCQINYILFTHVIEKDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARAVAAGAAADPSQAPAEPYTSRRNPKQFALAEAGFFRFAAY-NINDSESWHNYAACRQLAYGDYAGASEGYLKALEINP 1977 R+ +R + RV+RG + GRK A + + S EWE A +RTF W E + V FY + T + D PV W + D F R+ +G+T AA LQ WR + AR +F +++RA R+ K E AYL DP + NY+L+ H I DYDRAR LY + M RGPD+ +LF++ +F VT EED + + R G ADP ++ LA GFFR A N ++E+ NYAAC Y Y A+ YLKAL + P Sbjct: 1793 RLAARSIQRVFRGFM-GRKRAYRAKVILRLGSTISLEWELYRKRA-RIVRTFKAWD---ELEIYAEFPGVFFYHHRMTHVCSWDQPVPWVDYDREAFEARQQLFYWGYTKRMEQAAHSLQGMWRARVARKSFHMILRAVRLMKTCEQAYLDDPTHVIKLGNYVLYLHTITHDYDRARPLYHQLMRIMTQRGPDIPFVLFSYGLFLHVTLEEDDTVVEEMIQR----GKLADPMLI------------KYKLAFVGFFRQAVLQNPKNAEAHINYAACTHWLYEQYDEATRHYLKALALAP 2071
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7R9YF75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF75_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.770e-18 Identity = 52/132 (39.39%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 1591 KDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARA-VAAGAAADPSQAPAEPYTSRRNPKQFALAEAGFFRFAAYNINDSESWHNYAACRQLAYGDYAGASEGYLKALEINPKD 1983 +D DRAR L+ + ++AM RGPD +LF +AIF EED ++ V RA +A +DP P+ F LAE GF+R AA + D SWH YA CRQ Y D + Y++A+E P D Sbjct: 3 QDVDRARYLWRSLVSAMHNRGPDNAFVLFGWAIFLAAHHEEDWDDVMELVRRARIADRGGSDP------------RPRHFLLAELGFYRQAALQLQDGASWHAYALCRQFVYDDIVNTEDAYVRAVEAAPHD 122
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7J6RUZ7_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RUZ7_PEROL) HSP 1 Score: 78.2 bits (191), Expect = 2.040e-11 Identity = 42/102 (41.18%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 2860 VALPAGWEAVDADDGGVYYYHVASGATQWEVP------HGTHHAASGHEEGG----EEPVGDTSVPTATTDGV-AGWEEFKTDEGVPFWYNAASDESCWELP 3132 VALPAGWE ADDG YYY+ SG TQWE+P G + G EP ++ V T + + A WEEFK D+G P++YN + ++ WE P Sbjct: 17 VALPAGWEEFTADDGTPYYYNSNSGVTQWELPTQASAVEGVQEVEESKVDDGVAQKNEPAVESKVVEVTKEALPADWEEFKADDGTPYYYNTKTGQTQWEYP 118
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7J6MCJ4_PEROL (E3 ubiquitin- protein ligase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MCJ4_PEROL) HSP 1 Score: 75.1 bits (183), Expect = 7.050e-10 Identity = 58/206 (28.16%), Postives = 79/206 (38.35%), Query Frame = 1 Query: 2623 LLLGWETADDGAGNTFYYNGSTGESRWDPPAPDVADASARVDKGDEEQALSEPREHD-------------------GGAAEAADEAERSHEDEALKQRV--------------ALPAGWEAVDADDGGVYYYHVASGATQWEVPHGTHHAASGHEEGGEEPVGDTSVPTATTDGVA---GWEEFKTDEGVPFWYNAASDESCWELP 3132 L GW+ G +YYN ++G ++W+ P V A + A E A E E S D+ + Q+ ALPA WE ADDG YYY+ +G TQWE P G H GE V +S PTA GWEE ++G P+++ + + WELP Sbjct: 671 LPEGWQEFKTDDGTAYYYNEASGLTQWERPDGAVVTREAAGTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKASAVEGAQEVEESKVDDGVGQKSEADVGSKVVEVTKEALPADWEEFKADDGTPYYYNTKTGQTQWEYPQGAH---------GEGSVTQSSGPTAKAGQQQLPEGWEELAAEDGTPYYHQVTTGHTQWELP 867
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7J6M2F6_PEROL (Protein-tyrosine-phosphatase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M2F6_PEROL) HSP 1 Score: 75.1 bits (183), Expect = 8.100e-10 Identity = 58/206 (28.16%), Postives = 79/206 (38.35%), Query Frame = 1 Query: 2623 LLLGWETADDGAGNTFYYNGSTGESRWDPPAPDVADASARVDKGDEEQALSEPREHD-------------------GGAAEAADEAERSHEDEALKQRV--------------ALPAGWEAVDADDGGVYYYHVASGATQWEVPHGTHHAASGHEEGGEEPVGDTSVPTATTDGVA---GWEEFKTDEGVPFWYNAASDESCWELP 3132 L GW+ G +YYN ++G ++W+ P V A + A E A E E S D+ + Q+ ALPA WE ADDG YYY+ +G TQWE P G H GE V +S PTA GWEE ++G P+++ + + WELP Sbjct: 675 LPEGWQEFKTDDGTAYYYNEASGLTQWERPDGAVVTREAAGTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKASAVEGAQEVEESKVDDGVGQKSEADVGSKVVEVTKEALPADWEEFKADDGTPYYYNTKTGQTQWEYPQGAH---------GEGSVTQSSGPTAKAGQQQLPEGWEELAAEDGTPYYHQVTTGHTQWELP 871
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A7J6PEK3_PEROL (Protein-tyrosine-phosphatase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PEK3_PEROL) HSP 1 Score: 73.6 bits (179), Expect = 2.100e-9 Identity = 57/211 (27.01%), Postives = 84/211 (39.81%), Query Frame = 1 Query: 2623 LLLGWETADDGAGNTFYYNGSTGESRWDPPAPDVADASAR---------------------------------VDKGDEEQALSEPREH--DGGAAEAADEAERSHEDEALKQRVALPAGWEAVDADDGGVYYYHVASGATQWEVPHGTHHAASGHEEGGEEP-VGDTSVPTATTDGVAGWEEFKTDEGVPFWYNAASDESCWELPGDRAG 3147 L GW+ G +YYN ++G ++W+ P V A + + + E E D G A+ + A S E K+ ALPA WE ADDG YYY+ +G TQWE P G H S + GG G +P GWEE ++G P+++ + + WE P +++G Sbjct: 338 LPEGWQEFKTDDGTAYYYNEASGVTQWERPDGAVVTREAAGTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQASAVEGVQEVEESKVDDGVAQKNEPAVESKVVEVTKE--ALPADWEEFKADDGTPYYYNTKTGQTQWEYPQGAHGEGSVTQSGGANARAGQQQLPE-------GWEELTAEDGTPYYHQLTTGRTQWEPPTEQSG 539
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A813CW55_9DINO (TUBE1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CW55_9DINO) HSP 1 Score: 71.6 bits (174), Expect = 8.180e-9 Identity = 59/194 (30.41%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 1399 GFTAEEALAATVLQNAWRGKAARNNFQLLMRAQRICKGAEAAYLADPDSLRCQINYILFTHVIEKDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARAVAAGAAADPSQAPAEPYTSRRNPKQFALAEAGFFRFAAYNI-NDSESWHNYAACRQLAYGDYAGASEGYLKALEINP 1977 G+T EE AA +Q ++ + RA +GAEAAYL P S+ ++NY L+ + + +RAR LY ++ M RGPD L+L+ F + T E M I A RA A A + + FA AE GFF A +D E+ A +G A +L+A+++ P Sbjct: 63 GWTDEEDTAARTVQWYYKQAVRLREERARRRAVEKMEGAEAAYLDSPKSVVARMNYALWCQTVGRSLERARPLYLGLVDHMARRGPDHPLILYGFCLLLAATMGESMEVIEALAQRARRADIA--------------KGGESFADAERGFFAEALRRRPDDPEALLGMALVLTFVHGQVDAAEPLFLRAMDLAP 242
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Match: A0A5A8CVE3_CAFRO (WW domain-containing protein n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CVE3_CAFRO) HSP 1 Score: 71.6 bits (174), Expect = 9.520e-9 Identity = 59/194 (30.41%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 1399 GFTAEEALAATVLQNAWRGKAARNNFQLLMRAQRICKGAEAAYLADPDSLRCQINYILFTHVIEKDYDRARILYTTAINAMEARGPDVQLLLFAFAIFCLVTREEDMVSILATVARAVAAGAAADPSQAPAEPYTSRRNPKQFALAEAGFFRFAAYNI-NDSESWHNYAACRQLAYGDYAGASEGYLKALEINP 1977 G+T EE AA +Q ++ + RA +GAEAAYL P S+ ++NY L+ + + +RAR LY ++ M RGPD L+L+ F + T E M I A RA A A + + FA AE GFF A +D E+ A +G A +L+A+++ P Sbjct: 1352 GWTDEEDTAARTVQWYYKQAVRLREERARRRAVEKMEGAEAAYLDSPKSVVARMNYALWCQTVGRSLERARPLYLGLVDHMARRGPDHPLILYGFCLLLAATMGESMEVIEALAQRARRADIA--------------KGGESFADAERGFFAEALRRRPDDPEALLGMALVLTFVHGQVDAAEPLFLRAMDLAP 1531 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1229.1891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1229.1891.1 >prot_L-elsbetiae_contig1229.1891.1 ID=prot_L-elsbetiae_contig1229.1891.1|Name=mRNA_L-elsbetiae_contig1229.1891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=933bp MNNHSEVADFLSASFVRLGGKCKGKGIGKPSPDTSTSTSTSTGPTTDGREback to top mRNA from alignment at L-elsbetiae_contig1229:5918..19835- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1229.1891.1 ID=mRNA_L-elsbetiae_contig1229.1891.1|Name=mRNA_L-elsbetiae_contig1229.1891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13918bp|location=Sequence derived from alignment at L-elsbetiae_contig1229:5918..19835- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1229:5918..19835- >mRNA_L-elsbetiae_contig1229.1891.1 ID=mRNA_L-elsbetiae_contig1229.1891.1|Name=mRNA_L-elsbetiae_contig1229.1891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5598bp|location=Sequence derived from alignment at L-elsbetiae_contig1229:5918..19835- (Laminarionema elsbetiae ELsaHSoW15)back to top |