mRNA_L-elsbetiae_contig12281.1887.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A6H5JE56_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE56_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 5.180e-158 Identity = 253/352 (71.88%), Postives = 282/352 (80.11%), Query Frame = 1 Query: 64 RRHAVAAVPLGVAAAVCISAFLAANYQKTRRI-----ASKQDHVDVNPVAVATG---RRAPE-DEQVFSLYG------SVDAEPHAPPMDLSRSVLALLESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDT-APSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 ++H VAA LG+AAA+CI L Y+K+R A + ++ P A RRAPE DEQVFSLYG +VDAE APP++LS +VLALL+SFDVDPVRGFLP +DPLRRL Q ELQPWEAMA ALPSLLAVGQARKPLE LPELSI +VLTC RERMRALLLLCVFAHASVWGN EQP+ TIP+ +AVPL ALAAAEGMPPLLTHTSLVLHNWHRLDP+GP+R ENLACNC FLGGLDETWFYI+TVEIEARGGGVFGALLE A+ D+ + + AA VVL+ALAVA AGIVSMREAL+RMPVGCHPLIFYQRVRPFLSGWKANPTLPDGV+YE Sbjct: 5 QQH-VAAASLGLAAALCIPLVLVVRYRKSRAYPIAARALNKPVMERTPPATTXXXXVRRAPEEDEQVFSLYGRSDGDSNVDAERLAPPIELSGNVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSI------DVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKSIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASTAAGVVLDALAVACAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYE 349
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A836CBY0_9STRA (Indole 2,3-dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY0_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.070e-75 Identity = 141/274 (51.46%), Postives = 163/274 (59.49%), Query Frame = 1 Query: 262 AEPHAPPMDLSRSVLALLESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARV-----VLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLY 1068 AEP P + LS L LLE F+VDPVRGFLP DPL RL Q ELQPWE + LP+LL+ QAR PL LP L I +L +R RALLLL + HA VWG +P D +P +AVPL LAA G+PP++TH SLVL+NW RLDP G + A NLA C+FLGG DE WFY+ TVEIEARGG ALL+ A + L + MR AL RM GC P FY RVRPFLSGW+ANPTLP GV Y Sbjct: 38 AEPRCPLVPLSPDTLQLLEKFEVDPVRGFLPSEDPLLRLPQPELQPWEDLVSDLPALLSAAQARLPLSRLPILPI------TLLETEPQRRRALLLLSMLCHAFVWGEPARPADALPPGIAVPLWRLAADMGVPPVMTHLSLVLYNWRRLDPRGALDATNLAAACQFLGGHDEAWFYLTTVEIEARGGPAMAALLQAQRAATXXXXXXXXXXXXXXXCAELAACLRAVEGAVHGMRGALRRMSDGCDPRAFYHRVRPFLSGWRANPTLPRGVQY 305
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A3L7X5T9_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X5T9_9CHLR) HSP 1 Score: 204 bits (520), Expect = 4.780e-59 Identity = 118/259 (45.56%), Postives = 151/259 (58.30%), Query Frame = 1 Query: 301 VLALLESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQAR--KPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 VL L + V RGFLP DPL L QA WE ++ LP LLA G A + + ALP L + L + + RA++LL V AHA VW + EQP +P +A+PL ALAA G PPL TH + VLHNW RLDP GP+ N+A C F GGLDE WF++ +E+EARG A L++ AD D AA ++E L A +++M AL RMP C P +FY R+RPFL+GWK P LPDG++YE Sbjct: 9 VLPDLAQWQVHAERGFLPDPDPLLELPQAYAA-WERISRELPGLLAAGSAALLRQVSALPTLELSGLQTAPM------QNRAMILLTVLAHAFVWADPEQPRKLLPAAIALPLGALAAQLGRPPLCTHATTVLHNWRRLDPDGPIALGNVATLCGFFGGLDEAWFFLVALEVEARGAPAVVASLQLQAAVADLDAD----AATEIMEHL---HATLLAMTAALRRMPERCAPFVFYNRLRPFLAGWKDEPLLPDGLIYE 253
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A388Q5D8_9CHLR (Indoleamine 2,3-dioxygenase 2 n=3 Tax=Anaerolineae TaxID=292625 RepID=A0A388Q5D8_9CHLR) HSP 1 Score: 187 bits (474), Expect = 3.060e-52 Identity = 110/255 (43.14%), Postives = 144/255 (56.47%), Query Frame = 1 Query: 313 LESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGG--VFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 L ++V RGFLP DPL L E WE + LP LLA G L ++ L + EL H RA++LL V AHA VW + +QP +P +A+PL LAA G PP+ TH + VLHNW RLDPSGP+ N+A F GGLDE WF++ T+ +EARG V+ L+ A D + AA VLE + A +++M EAL RM C P +F+ R+RPFL+GWK P LPDG++YE Sbjct: 13 LAQWEVHAERGFLPDPDPLLEL-PPEYAAWERINRELPGLLAAGSGAM-LRSVGRLPVLELAGLQTAPMHN---RAMVLLSVLAHAFVWADPQQPRKQLPAAIALPLGTLAAQLGRPPICTHATTVLHNWRRLDPSGPIELGNVATLAGFFGGLDEAWFFLVTLAVEARGAPAVVYSLQLQAAVLALDVE------AATEVLERM---HATLLAMMEALRRMHERCAPFVFFNRLRPFLAGWKDEPLLPDGLIYE 253
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A3L7XP59_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7XP59_9CHLR) HSP 1 Score: 185 bits (469), Expect = 1.670e-51 Identity = 111/257 (43.19%), Postives = 139/257 (54.09%), Query Frame = 1 Query: 313 LESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQAR--KPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGG--VFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 L ++V RGFLP DPL L E W+ + LP LLA G A + + LP L + L H RA++LL V AHA VW + +QP +P +A+PL LAA G PPL TH + VLHNW RLDP GP+ N+A F GGLDE WF + T+E+EARG V G L+ A D D A EAL A + M AL RM C P +F+ R+RPFL+GWK P LPDG++YE Sbjct: 13 LAQWEVHAQRGFLPDPDPLLEL-PPEYAAWDRINRELPGLLAAGSAAVVRSVSRLPTLELAGL---QTAAMHN---RAMVLLSVLAHAFVWADPQQPRRLLPAAIALPLGTLAAQLGRPPLCTHATTVLHNWRRLDPDGPIELGNVATLAGFFGGLDEAWFLLVTLEVEARGAPAVVCGLELQAAVAALDADAAT---------EALERMHAILQDMTAALQRMYERCAPFVFFNRLRPFLAGWKDEPLLPDGLIYE 253
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A523F9E5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523F9E5_9PROT) HSP 1 Score: 181 bits (460), Expect = 4.170e-50 Identity = 105/253 (41.50%), Postives = 138/253 (54.55%), Query Frame = 1 Query: 313 LESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 L SF +D RGFLP DPLRRL E PWE +A + L+ G+ R +E LP L + + + RA+++L HA VWG E + IP +AVP LA G PP+L++ S L NW R+DP+GP+ ENLA FLGG DE WF + VEIE R A+ A D A +AAA +EA + +M E L RMP C P +++ RVRP++ GWK NP +PDGV+YE Sbjct: 6 LSSFGIDAERGFLPPKDPLRRL-PPEFAPWEDVAHDIGKLIVAGRLRGAVEGLPRLPV------SAIEDEGAARRAMVVLSYLGHAYVWG-AEGAAEVIPEPIAVPWFQLAQRLGRPPVLSYASYALDNWRRIDPNGPIEIENLAIAQNFLGGADEDWFILIHVEIEVRAAPAIRAI-PAALGAVARDDADGLAAALAEMEA------SLAAMIETLRRMPEFCDPYVYFHRVRPYIHGWKDNPAVPDGVVYE 243
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A7K1JKJ6_9MYCO (Uncharacterized protein n=3 Tax=unclassified Mycolicibacterium TaxID=2636767 RepID=A0A7K1JKJ6_9MYCO) HSP 1 Score: 179 bits (454), Expect = 2.450e-49 Identity = 108/252 (42.86%), Postives = 141/252 (55.95%), Query Frame = 1 Query: 316 ESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 E F V RGFLPR DPL L A L W+ +A LP LLA G+ R LE P I L T H + RA+L+L HA VWG+ QP +P +A P +A G PP+L++ S L NW R+DP GPV N+ F GGLDE WF + V+IEAR G AL+ +G+ A + AAA + L +A A G M + L+RMP C P ++Y+RVRP++ GWK NP +PDG++YE Sbjct: 10 ERFGVTAERGFLPRDDPLGHL-PAPLAAWDELARNLPKLLATGRVRTFLERPPAFDIAPL------TTHPDVERAMLILSYLGHAYVWGDV-QPVYRLPAALAQPWHDVALRLGRPPVLSYASYALANWRRVDPEGPVALGNIVLLQNFAGGLDEEWFVLVHVDIEARAGN---ALVAIGEAQRAVQHAQA-AAAEIALGTIACALEG---MYQTLARMPEHCDPHVYYRRVRPYIHGWKNNPAMPDGLIYE 246
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A523E1X2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523E1X2_9BACT) HSP 1 Score: 179 bits (453), Expect = 2.840e-49 Identity = 106/258 (41.09%), Postives = 145/258 (56.20%), Query Frame = 1 Query: 298 SVLALLESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 S+ L ++VDP RGFLP DPL RL A WEA+A + LL G+ R+ LE LPE+ + +VL E RA+LLLC+F +A VWG E+P +PR VAVP +A G PP++ H S+VL NW R+DP GP+ +NLA GG DE WFY+ +EARG A+++ +AA+ A + A + + + ++ E LSR P C P IFY RVRPFL+GW DG++Y+ Sbjct: 2 SIAEELARYEVDPGRGFLPSCDPLARL-PAAFDAWEAVASQVSELLLAGRLREALEQLPEVDL------DVLGRRDELERAMLLLCIFGNAYVWG-AEEPAGALPRAVAVPWCEVADKLGRPPIIAHASIVLRNWRRIDPEGPLTLDNLATLQTMGGGGDEQWFYLIPAAMEARGAEGLIAMMQA-RNAAEAGHAGDVTVALDTIHTV------VGALTEILSRTPEKCDPYIFYHRVRPFLAGWPG-----DGIIYK 239
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A7C5YVB1_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5YVB1_9BACT) HSP 1 Score: 178 bits (451), Expect = 7.620e-49 Identity = 100/253 (39.53%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 313 LESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEALPELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 LE ++V P RGFLP DPL L PWE +A LP LL + R+ +E+LP LS+ L RER RA++LL HA VW N + P + IP +A+P ++ G PP+L++ S L NW RLDP+ P+ N+ FL GLDE WF + V+IEA+ + A D A + AL + + +M L+RMP C P I+Y RVRP++ GWK NP LP+GV+YE Sbjct: 11 LEDYEVHPERGFLPAEDPLPYLEDPYYAPWEQVAGELPKLLVARRVRQVIESLPRLSVERLHTD------RERRRAMMLLSYLGHAYVW-NGDTPAERIPANLAIPWYEVSQLLGRPPVLSYASYALDNWRRLDPNAPIELGNIVLLQNFLAGLDEEWFILVHVDIEAKAARALRQIPIALLAAEQGDVA-------TLTHALEEVASALEAMHAVLARMPEACDPYIYYHRVRPYIHGWKNNPALPNGVVYE 249
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Match: A0A6G2S3S8_9ACTN (Uncharacterized protein n=2 Tax=Streptomyces sp. SID8354 TaxID=2690339 RepID=A0A6G2S3S8_9ACTN) HSP 1 Score: 177 bits (450), Expect = 1.290e-48 Identity = 113/263 (42.97%), Postives = 139/263 (52.85%), Query Frame = 1 Query: 292 SRSVLALLESFDVDPVRGFLPRIDPLRRLLQAELQPWEAMAVALPSLLAVGQARKPLEAL---PELSIGELFVPNVLTCHRERMRALLLLCVFAHASVWGNTEQPEDTIPRVVAVPLTALAAAEGMPPLLTHTSLVLHNWHRLDPSGPVRAENLACNCRFLGGLDETWFYIATVEIEARGGGVFGALLEVGDDAADPDTAPSMAAARVVLEALAVARAGIVSMREALSRMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVLYE 1071 +R+ LL VDP RGFLP DP+RRL E WE + LP LLA G R+ ++AL P LS+ LT +R RA+LLL HA V+ + P +P +A P A A G PP+L++ S L NW R DP GPV N+A FLGGLDE WF + V IEA G A D A + D P A ++VL + R M L RMP GC P I+Y RVRPFL GW NP LP+GV+YE Sbjct: 3 TRTADDLLAEHGVDPQRGFLPPKDPVRRL-PPEFTAWEELTDVLPKLLAAGLVREEIDALGPAPSLSL--------LTRQDQRERAMLLLSYLGHAYVFADAHAPTARLPAQLAQPWCAAADLAGRPPVLSYASHALVNWRRFDPQGPVALGNIARLQNFLGGLDEEWFVLVHVAIEACAGPGLLAAGRAQDTAEEGD--PERTAEQLVLVGDVLER-----MLSVLRRMPEGCDPYIYYHRVRPFLFGWTGNPALPEGVVYE 249 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12281.1887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12281.1887.1 >prot_L-elsbetiae_contig12281.1887.1 ID=prot_L-elsbetiae_contig12281.1887.1|Name=mRNA_L-elsbetiae_contig12281.1887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp MDLILAGVFSKCSILPSFMAIRRHAVAAVPLGVAAAVCISAFLAANYQKTback to top mRNA from alignment at L-elsbetiae_contig12281:2629..5531+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12281.1887.1 ID=mRNA_L-elsbetiae_contig12281.1887.1|Name=mRNA_L-elsbetiae_contig12281.1887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2903bp|location=Sequence derived from alignment at L-elsbetiae_contig12281:2629..5531+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12281:2629..5531+ >mRNA_L-elsbetiae_contig12281.1887.1 ID=mRNA_L-elsbetiae_contig12281.1887.1|Name=mRNA_L-elsbetiae_contig12281.1887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2142bp|location=Sequence derived from alignment at L-elsbetiae_contig12281:2629..5531+ (Laminarionema elsbetiae ELsaHSoW15)back to top |