mRNA_L-elsbetiae_contig12281.1886.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: D8LIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV7_ECTSI) HSP 1 Score: 121 bits (304), Expect = 3.250e-30 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQIDGFLRRCDSIPAFLSTLTIELFEKQTFV 255 YRIDLMKDPTRQ LRLRSMYAE+ESDCL+FQQ+ QS+GGGLELV P+ +I+ +LR+CDSIPAFLS+LT ELFEKQTFV Sbjct: 672 YRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKPQSEGGGLELVETPLAV-QHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFV 755
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: A0A7S3PFY6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFY6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.290e-13 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQID----GFLRRCDSIPAFLSTLTIELFEKQTFV 255 + ID+ +D Q LR+RSM+AERE D LLF+ + +GG L L+ FC +ID +L++C+S+PAFLSTLT++LFEKQTF+ Sbjct: 357 FMIDMTQDQNPQ-LRVRSMFAEREDDHLLFKWQPDVEGG-LHLLETD-----FCSRIDENIFAYLKKCNSVPAFLSTLTLDLFEKQTFL 438
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: A0A6S7IHR3_PARCT (Mitotic spindle assembly checkpoint MAD1-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IHR3_PARCT) HSP 1 Score: 70.5 bits (171), Expect = 2.200e-12 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQIDGFLRRCDSIPAFLSTLTIELFEKQT 249 YRID+++D Q+ +L+SMYAER SDCLLFQ + LE F+ V ID +L +C+SIPAFLS++T+ELFE+QT Sbjct: 250 YRIDVVQD---QQYKLKSMYAERSSDCLLFQCNANGKTMLLETDFSLQVKSL----IDQYLIQCNSIPAFLSSVTLELFERQT 325
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: L8GX36_ACACA (Oxidoreductase, short chain dehydrogenase/reductase superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX36_ACACA) HSP 1 Score: 70.9 bits (172), Expect = 2.320e-12 Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQIDGFLRRCDSIPAFLSTLTIELFEKQTF 252 +R+D ++ + ++ RL+SMYAE+E D L+FQ+ +S G LEL+ A C ++ FL RC SIPAFL+ LT+ LF+KQTF Sbjct: 576 WRVDYTEERSVKRYRLKSMYAEKEVDELVFQKTAKSSG--LELM-ATDFSCTLDVEVQAFLSRCHSIPAFLANLTLSLFDKQTF 656
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: M4B946_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B946_HYAAE) HSP 1 Score: 67.0 bits (162), Expect = 5.190e-11 Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQ-IDGFLRRCDSIPAFLSTLTIELFEKQTF 252 Y++DL K + LRLRSMYAE + D LL + G LEL+ + FC+ Q + +L C S PAFLSTLT+ LFEKQTF Sbjct: 666 YKVDLKKSNGMEMLRLRSMYAEHDDDDLLIRME---ASGSLELLDSD--FCSRINQRVFAYLTTCRSFPAFLSTLTLHLFEKQTF 745
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: A0A7S1CB74_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB74_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.150e-11 Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 1 YRIDLMKDPTRQ--KLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQID----GFLRRCDSIPAFLSTLTIELFEKQT 249 Y++D++ + KL LRSMYAERE D LL Q + GGLEL+ FC +ID +L C SIPAFLS+LT++LF++QT Sbjct: 77 YKVDMVAGSAGKDDKLYLRSMYAEREDDHLLMQMKK----GGLELLETE-----FCKRIDPKMFAYLTTCHSIPAFLSSLTLDLFDRQT 156
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: A0A7S3YG22_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG22_HETAK) HSP 1 Score: 65.5 bits (158), Expect = 9.970e-11 Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQIDG----FLRRCDSIPAFLSTLTIELFEKQTF 252 Y++D+ R KLRLRSM+AE ESD LLFQ GGLEL F +ID +L +C+S+PAFLS +T+ LFE QTF Sbjct: 189 YKLDMGGAHARPKLRLRSMFAENESDDLLFQWGK----GGLELCETD-----FATKIDRKVFVYLHQCNSVPAFLSNVTLNLFEAQTF 267
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: T0Q5N2_SAPDV (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0Q5N2_SAPDV) HSP 1 Score: 65.9 bits (159), Expect = 1.320e-10 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFC-PQIDGFLRRCDSIPAFLSTLTIELFEKQTFVPR 261 Y+IDL K+ +L LRSMYAE E+D + F+ D LE FCA P+ G+L C+S PAF+ST+T+ LFEKQTF P+ Sbjct: 638 YKIDLKKN----ELSLRSMYAENEADEIKFRLVDDENMALLE-----TDFCASLDPKYLGYLSHCNSPPAFVSTVTLNLFEKQTFQPK 716
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: W2RBQ8_PHYPN (Uncharacterized protein n=46 Tax=Phytophthora TaxID=4783 RepID=W2RBQ8_PHYPN) HSP 1 Score: 65.9 bits (159), Expect = 1.320e-10 Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQID----GFLRRCDSIPAFLSTLTIELFEKQTF 252 Y++DL K + LRLRS+YAE + D LL + G LEL+ + FC QI+ +L C S PAFLSTLT+ LFEKQTF Sbjct: 660 YKVDLRKSNGMELLRLRSVYAEHDDDELLVRMESN---GSLELLDSE-----FCSQINQRVFAYLTTCRSFPAFLSTLTLHLFEKQTF 739
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Match: W2RDT9_PHYPN (Uncharacterized protein n=93 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RDT9_PHYPN) HSP 1 Score: 65.9 bits (159), Expect = 1.330e-10 Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 1 YRIDLMKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPQID----GFLRRCDSIPAFLSTLTIELFEKQTF 252 Y++DL K + LRLRS+YAE + D LL + G LEL+ + FC QI+ +L C S PAFLSTLT+ LFEKQTF Sbjct: 706 YKVDLRKSNGMELLRLRSVYAEHDDDELLVRMESN---GSLELLDSE-----FCSQINQRVFAYLTTCRSFPAFLSTLTLHLFEKQTF 785 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12281.1886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12281.1886.1 >prot_L-elsbetiae_contig12281.1886.1 ID=prot_L-elsbetiae_contig12281.1886.1|Name=mRNA_L-elsbetiae_contig12281.1886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp MKDPTRQKLRLRSMYAERESDCLLFQQRDQSQGGGLELVFAPVVFCAFCPback to top mRNA from alignment at L-elsbetiae_contig12281:254..1119+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12281.1886.1 ID=mRNA_L-elsbetiae_contig12281.1886.1|Name=mRNA_L-elsbetiae_contig12281.1886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=866bp|location=Sequence derived from alignment at L-elsbetiae_contig12281:254..1119+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12281:254..1119+ >mRNA_L-elsbetiae_contig12281.1886.1 ID=mRNA_L-elsbetiae_contig12281.1886.1|Name=mRNA_L-elsbetiae_contig12281.1886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig12281:254..1119+ (Laminarionema elsbetiae ELsaHSoW15)back to top |