mRNA_L-elsbetiae_contig12276.1880.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: D7FUS3_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS3_ECTSI) HSP 1 Score: 252 bits (643), Expect = 4.820e-75 Identity = 129/192 (67.19%), Postives = 146/192 (76.04%), Query Frame = 1 Query: 4 QDLADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRTVEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPPKSRYSDXXXXXXXXXXXXXXALGGQAGGTGADERSSEVARFAIVEAICECTGVSTELAAYALQLSK 579 +DLA+ADA AFVE+SDGMFA+VE PS HLVRLWI VKPWRLYEGLGSRTVEALGLDP KGVM MLTTDQYYTLS+KCP V+WLRQV P+KM+ A+ SDGSVG++F LQWMLRKRLEEEL NWPP+SRY+D X GA + + E R AI EAIC+CT VS ELAAYALQ S+ Sbjct: 109 KDLAEADAGAFVEESDGMFARVETPSTHLVRLWIGVKPWRLYEGLGSRTVEALGLDPLKGVMVMLTTDQYYTLSNKCPGVRWLRQVAPEKMHTAAKCSDGSVGDTFSLQWMLRKRLEEELKQNWPPRSRYADEEEAEGDPHRAGGXXXXXXXXXXGAGDPNMEATRLAI-EAICDCTAVSAELAAYALQFSQ 299
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: A0A6H5JHW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW3_9PHAE) HSP 1 Score: 184 bits (466), Expect = 7.610e-51 Identity = 104/190 (54.74%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 4 QDLADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRTVEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPPKSRYSDXXXXXXXXXXXXXXALGGQAGGTGADERSSEVARFA-IVEAICECTGVSTELAAYALQ 570 +DLA+ DA A E DG+ A+V+A S + +RLW+ V+PWRLY L SRTVEALGLDP KGVM MLTTDQ+YTLS+ PEVKWLRQVHPDK+ SMR DGS G++F L+W LRKRLEE+LS NWPP R + G A G ++ E F V +CECTGV ELA YALQ Sbjct: 9 KDLANGDALAINEGLDGVAARVQARSTYQLRLWVVVQPWRLYNHLSSRTVEALGLDPMKGVMVMLTTDQHYTLSTVRPEVKWLRQVHPDKVE-GSMRCDGSAGDTFSLEWTLRKRLEEDLSRNWPPAPRCARSPDDERD--------AGTCAREEGLVCKNDERKCFKDTVRRMCECTGVVEELAVYALQ 189
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: A0A6H5J7F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F0_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.190e-31 Identity = 83/215 (38.60%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 13 ADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRT-VEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPPKSRYSDXXXXXXXXXXXXXXALGGQ--------------AGGTGADERSSE----------VARFAIVEAICECTGVSTELAAYALQLSKV 582 A ADAD F++ DG+ A+V+ SA L LW+ + P RL EG T VE +GLDP KGV+ MLTTD YT SSKCP+V W RQV M+ + M + GS+GE+FP +WML +++ EL+ W S +GG A TGA E +++ A V+ ICE VS AAY L++SKV Sbjct: 91 AQADADEFIDGVDGITARVQLSSA-LTNLWVYIDPRRLSEGRAPGTRVETVGLDPRKGVVVMLTTDHDYTSSSKCPKVLWARQVARTAMDMSKMDTYGSIGETFPHEWMLCGKIQVELTRAWSQGMGPSRTTDEHVKGGHQSEQGMGGDVCHDGGSPVREGRVAAATGAGEGTAKNTTDGGKLHSAATRRAVKMICESMVVSAGFAAYVLRISKV 304
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: A0A6H5JD35_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD35_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.640e-30 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 7 DLADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRTVEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNW 375 DLA ADADA +GMFAKVEA + L+RLW+CV+ RL+EGL +R VEALGLDP+K VM M TTDQ YT + P+V+W RQV P K + +G +GE FPLQ L ++L+E+L+ W Sbjct: 56 DLAKADADALNVDVEGMFAKVEAHTPTLIRLWVCVEHSRLFEGLATRAVEALGLDPSKDVMVMFTTDQDYT-GCRRPKVQWARQVDPVKSKADDLCPEGRIGEIFPLQGTLCQKLDEDLTGMW 177
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: D7G899_ECTSI (UBA/TS-N domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G899_ECTSI) HSP 1 Score: 124 bits (310), Expect = 3.070e-29 Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 DLADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRTVEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWP 378 DLA ADADA +GMFAKVEA ++ L+RLW+CV+ RL+EGL + VEALGLDP K VM M TTDQ Y + P+V+W RQV P K + +G +GE FPLQ L ++L+E+L WP Sbjct: 49 DLAKADADALNVDVEGMFAKVEAHTSTLIRLWVCVEHSRLFEGLATSAVEALGLDPAKDVMVMFTTDQDYPGCVR-PKVQWARQVDPVKSKADDLCPEGRIGEIFPLQGTLCQKLDEDLKGMWP 171
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: D8LFE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE1_ECTSI) HSP 1 Score: 120 bits (302), Expect = 4.240e-29 Identity = 68/132 (51.52%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 193 MLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPPKSRYS---DXXXXXXXXXXXXXXALGGQAGGTGADERSSEVARFAIVEAICECTGVSTELAAYALQLSK 579 MLTTDQ+YTLS+ PEVKW+RQVHPDKM SMR DGSVG++F L+WMLRKRLEE+LS NWPP R + D G D V +CECTGV ELA YALQ+SK Sbjct: 1 MLTTDQHYTLSTVRPEVKWVRQVHPDKMEE-SMRCDGSVGDTFSLEWMLRKRLEEDLSRNWPPAPRCARSPDDKRDPGTSAREEGLVCKNDEGKCSKDT----------VRRMCECTGVVEELAVYALQVSK 121
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: D7FUS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS6_ECTSI) HSP 1 Score: 117 bits (293), Expect = 2.290e-28 Identity = 80/216 (37.04%), Postives = 108/216 (50.00%), Query Frame = 1 Query: 13 ADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRT-VEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPPKSRYSDXXXXXXXXXXXXXXALGGQA----------GG---------------TGADERSSEVARFAIVEAICECTGVSTELAAYALQLSKV 582 A+ DAD F++ DG+ A V+ S L +W+ V P RL EG T V+ +GLDP+KGV+ MLTT Y S K P+VKW RQV P M++ M + GS G++FP +WML +++ +L+ W R S +GG GG TG + S R A V+ ICE T VS LAAY L++SKV Sbjct: 92 AEVDADEFIDGVDGISASVQL-SPTLTNVWVYVDPRRLSEGRAPGTCVKTVGLDPSKGVVVMLTTPHDYMSSGKIPQVKWARQVAPTAMDKQKMDTYGSTGKTFPHEWMLCGKIQAQLTRAWSQGKRVSRTSDEHVKGGDRPEQEMGGDVCRDGGSQVREGGVTAATTAGEGRANEETGGGKLDSAAIRRA-VKMICESTVVSAGLAAYVLRISKV 305
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: D7G896_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G896_ECTSI) HSP 1 Score: 117 bits (294), Expect = 4.120e-27 Identity = 83/217 (38.25%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 13 ADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRT-VEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNWPP---KSRYSDXXXXXXXXXXXXXXALGGQAGG------------------------TGADERSSEVARFAIVEAICECTGVSTELAAYALQLSK 579 A ADAD F++ DG+ A+V+ S L LW+ + P RL EG T VE +GLDP+KGV+ MLTTD YT SSKCP+V W RQV MN+ M + GS+GE+FP +WML +++ EL+ W SR +D + GG T E S R A V+ ICE VS AAY L++SK Sbjct: 89 AHADADEFIDGVDGITARVQLSSV-LTNLWVYIDPRRLSEGRALGTSVETVGLDPSKGVVVMLTTDYGYTSSSKCPKVLWARQVARAAMNKPKMDTYGSIGETFPHEWMLCGKIQAELTRAWSQGMGPSRTADEHVKGGHQSEQGMDGDVCRDGGSPVREGRVAAATAAGEXXXXAKKKTDGGELDSAATRRA-VKMICEAMVVSAGFAAYVLRISK 303
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE) HSP 1 Score: 112 bits (279), Expect = 4.470e-25 Identity = 77/215 (35.81%), Postives = 108/215 (50.23%), Query Frame = 1 Query: 13 ADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRT-VEALGLDPTKGVMAMLTTDQYYTLSSKCPEVKWLRQVHPDKMNRASMRSDGSVGESFPLQWMLRKRLEEELSHNW-------------------PPKSRYSDXXXXXXXXXXXXXXALGGQAGG------TGADERSSEVARFAIVEAICECTGVSTELAAYALQLSK 579 A+ DAD F++ DG+ A+V A L +W+ V P RL EG S T V+ +GLDP+KGV+ MLTT Y S + P+VKW RQV P M++ M + GS+G++FP +WML +++ +L+ W P + +D AG TG + S R A V+ ICE T VS LAAY L++SK Sbjct: 92 AEVDADEFIDGVDGISARVHLSPA-LTNIWVYVGPRRLSEGRASGTCVKTVGLDPSKGVLVMLTTPHDYISSGEFPQVKWARQVAPAAMDKQKMDTYGSIGKTFPHEWMLCGKIKAQLTRAWSQGKGTSRTSGEHAKGGDRPEREMGADVCRDGGSPAREGGVTAAMTAGEGRANEETGGGKLDSAAIRRA-VKMICESTVVSAGLAAYVLRISK 304 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12276.1880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12276.1880.1 >prot_L-elsbetiae_contig12276.1880.1 ID=prot_L-elsbetiae_contig12276.1880.1|Name=mRNA_L-elsbetiae_contig12276.1880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=199bp MQDLADADADAFVEKSDGMFAKVEAPSAHLVRLWICVKPWRLYEGLGSRTback to top mRNA from alignment at L-elsbetiae_contig12276:3340..5612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12276.1880.1 ID=mRNA_L-elsbetiae_contig12276.1880.1|Name=mRNA_L-elsbetiae_contig12276.1880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2273bp|location=Sequence derived from alignment at L-elsbetiae_contig12276:3340..5612- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12276:3340..5612- >mRNA_L-elsbetiae_contig12276.1880.1 ID=mRNA_L-elsbetiae_contig12276.1880.1|Name=mRNA_L-elsbetiae_contig12276.1880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1194bp|location=Sequence derived from alignment at L-elsbetiae_contig12276:3340..5612- (Laminarionema elsbetiae ELsaHSoW15)back to top |