mRNA_L-elsbetiae_contig12272.1879.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12272.1879.1
Unique NamemRNA_L-elsbetiae_contig12272.1879.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 2.670e-136
Identity = 241/427 (56.44%), Postives = 298/427 (69.79%), Query Frame = 1
Query:    7 HPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSA---ASLGRQANAEAAAAAGLAPPVLPSNAMVITHTGNMVSDFFEKGLFVG 1278
            HPSV+HKC ADF   +V S    SCAVCD  C +M C+ V  ++ P++ LLVA+  L+NC AVR  FFN PGD   +LDG VL R+GF+ +APH LRVC  CL+ L  +K+P+AA ANG +LGDFP+ LR A++VEM+AASPVR+SG V+AL+E KVG + GSAK+LMRGTFTFYM +AY +  +LPACDTD+AGSF CALVG KP++ QLR LFGARR  V  LL FQLDK+N L+GVH+LA+EAQ S  NL TY +DGSIPKAI DAL+PV D  N+ ANARSTHAHGNREP++          +  PAP       +D      P P IIETNA++ +G D+A SSH KP RLR LG  +        +A T+A   ASL + A A+A AAAG  PP    NA+V+TH+G MVSDF   GLFVG
Sbjct:   87 HPSVMHKCLADFDTFMVNSIRRTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDH---------EDGPAPPAA-ADHADDGAGATP-PFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVG 501          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 5.180e-131
Identity = 229/404 (56.68%), Postives = 284/404 (70.30%), Query Frame = 1
Query:   76 SCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSA---ASLGRQANAEAAAAAGLAPPVLPSNAMVITHTGNMVSDFFEKGLFVG 1278
            SCAVCD  C +M C+ V  ++ P++ LLVA+  L+NC AVR  FFN PGD   +LDG VL R+GF+ +APH LRVC  CL+ L  +K+P+AA ANG +LGDFP+ LR A++VEM+AASPVR+SG V+AL+E KVG + GSAK+LMRGTFTFYM +AY +  +LPACDTD+AGSF CALVG KP++ QLR LFGARR  V  LL FQLDK+N L+GVH+LA+EAQ S  NL TY +DGSIPKAI DAL+PV D  N+ ANARSTHAHGNREP++          +  PAP       +D      P P IIETNA++ +G D+A SSH KP RLR LG  +        +A T+A   ASL + A A+A AAAG  PP    NA+V+TH+G MVSDF   GLFVG
Sbjct:   30 SCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDH---------EDGPAPPAA-ADHADDGAGATP-PFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVG 421          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 2.320e-128
Identity = 236/426 (55.40%), Postives = 285/426 (66.90%), Query Frame = 1
Query:    1 VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXR-APAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSAASLGRQANAEAAAAAGLAPPVLPSNAMVITHTGNMVSDFFEKGLFV 1275
            VLHP     C    VA IV S+LSVS AV DL CT+  C WVKAE   N++LL  + +L  C   +  F N PGD +K+LDG+VL  E FE   PHRLRVCSTCL D+R NK+ +  K  GF LGDFPEE R A+WVEMIAA+PVRMSGT +ALEEFK+  +SGSAK+LMRGTFTFYM N YA+G+ LPAC TDVAG+F CAL G+K   +QLR LFGARRS                         AQ S+ N RTY EDG IPK IQDAL+PVT++ N+VANARSTHA GNREPEE          DS+ + + G+ G +D      APA  IIETN V+ TG DMA S  Y+ +RLR L S M+++  + TT   + AS+  QANA++AAAA  APP LP NAMV+THTGNMVSDF+++GLFV
Sbjct:  155 VLHPP---YCTKVLVAHIVDSSLSVSRAVYDLFCTKTDCVWVKAEELQNKDLLTPNKILTECAMFKPSFINYPGDKAKVLDGLVLALEDFEAGEPHRLRVCSTCLKDMRKNKMGRQRKYYGFMLGDFPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSM------------------------AQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGG-------DSSTSAKYGNNGNTDSSTDEGAPASFIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKSAPSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFV 546          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.630e-117
Identity = 205/365 (56.16%), Postives = 253/365 (69.32%), Query Frame = 1
Query:    7 HPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSS--KLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAM 1095
            HPSVLHKC +DF   IV S  S SC +CD  C  M C+ V A++ P+++LL AD  L+ C AVR  FFN PGD S  KLLDG+VL+R GFE+ +P+R++VC  CL  L   ++P+AA ANG +LGDFPE LR A++VEMIAASPVR+SG V+AL+E K G +SGSAK+ MRGTFTFYM +AY +  +LPACDTD+AGSF CALVG KP L QLR L GARR  V+ LLDFQLDK+N L+G H LAREAQ +  NL  Y  DGSIPKA+ DA++P+ D   + +NARSTHAHGNRE + T                DG +  +D       AP +IETNAVV TG D+A +   KP+RLR LG AM
Sbjct:  201 HPSVLHKCLSDFTNHIVNSVRSTSCGICDRNCKSMDCKLVAAKDLPHKDLLKADDKLLACSAVRGTFFNYPGDDSVPKLLDGLVLERLGFESTSPYRMQVCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDPTP---------------DGGIESTDDGPT---APFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAM 547          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 3.380e-113
Identity = 216/428 (50.47%), Postives = 276/428 (64.49%), Query Frame = 1
Query:    1 VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPG-DSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSAASLGRQANAEAAAA--AGLAPPVLPSNAMVITHTGNMVSDFFEKGLFV 1275
            +LHPS +HKC  DF   +V S  S SCAVCD+L  E+    + A +  + +LL A   ++ C  VR  FF  PG D SK LDG+VL+R GFE + PHRLRVC+ C  DL  N++P+AA ANG +LG+FPE LR AS+VE+IAASPVR+SG V+AL+E KVG ++GSAK+LMR TFTFYM +AY +  +LPACD D+AGS    LVG   T  QLR L GARRS +  L  F LDK+N L+G H LAR+AQ+S  NL T+  +G +PKAI D+++ V D+  S ANARSTHAH NREPE   N+            R G + + D       AP ++E NAV+ TG D A +   KP+RLR LGS+M        + D S   L +QA AEAAAA  AG   P+    AMV+TH+G +VSDF E GLF+
Sbjct:  165 ILHPSRVHKCIHDFCTFMVNSIESTSCAVCDVLHREIDINLIAATDLRHADLLKASDKMLGCAGVRDRFFGYPGGDDSKCLDGLVLERLGFEADPPHRLRVCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTD-----------RAGGILRDDTLPT---APMVVEINAVMDTGEDRAVAESSKPARLRGLGSSM-------CSGDPS---LAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFI 568          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 1.820e-100
Identity = 201/447 (44.97%), Postives = 254/447 (56.82%), Query Frame = 1
Query:    1 VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSAASLGRQANAEAAAAAGLAPPVLP----------------------SNAMVITHTGNMVSDFFEKGLFV 1275
            VL  S+L KC ADF   +  +  SVSCAVCDL+C  + CEWV A   PNR LL A   L   D++ +   + PGD++K LDG+VL REGFE+   HRLRVCS CL DL  NK P A  ANG ++GDFPE L+D++WVEM AASPVR SG V ALE+ KVG + GSA  +MRGTFTF+  NAY + + LP CDTD+AGS  CALVG +PT  QLR L GARRS+++ L+DFQ D+ N L G H L + AQ S  NL T+P+DGS+P  I D+LIP  D       A S++   NR+PE  V        D A    DG     +          II+  AV+ +G + A SS  +P RLR L + +    SAGT A T+          + A AAG  P                           N +V+ HTG MV DF E G+ +
Sbjct: 2203 VLGTSMLFKCIADFHTYMADNIHSVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTNKCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPV--------DDADEAVDGQNADDNPAF-------IIDNCAVIPSGREQAVSSESRPERLRTLQTDLIN--SAGTAAPTA-----MDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMI 2627          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 1.590e-77
Identity = 168/365 (46.03%), Postives = 202/365 (55.34%), Query Frame = 1
Query:    1 VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETVN----SANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRML 1083
            VL+ SVLH CA+ F+  +  S  SVS  VCD +C E  CE + A   PNR+LL ADA L NCDAVR LFF   GD+S LL+G+VLQREGFE+ APHRLRVCS  L DLR NK PKAAKAN FFLGDFP EL++A+WVEM+AA PVR+SGT++ALE+ K                                       S  C +                                               SEANL+ YPEDGS P+AIQDALI VTDR N+VA ARSTHAHGNREPE+ V     S   R+ + +     GD+   D      P PC+ ET AV+ +GSD+AKSS Y+P+RLR L
Sbjct:   55 VLNSSVLHHCASRFITKLADSDSSVS--VCDCMCKEKDCELLSAGELPNRDLLTADAKLTNCDAVRPLFFTYLGDNSNLLNGLVLQREGFESTAPHRLRVCSIRLADLRKNKCPKAAKANVFFLGDFPAELKEATWVEMLAAGPVRLSGTIIALEQLK---------------------------------------SVVCLV-----------------------------------------------SEANLQGYPEDGSTPQAIQDALISVTDRRNTVAAARSTHAHGNREPEQPVGGTSGSDGQRDGEDSDRQGSGDVNGDDDDDGVLP-PCVNETKAVMPSGSDLAKSSQYRPTRLRAL 330          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.010e-37
Identity = 88/173 (50.87%), Postives = 112/173 (64.74%), Query Frame = 1
Query:    1 VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGT 519
            VL+ SVLH CA+ F+  +  S LSVSCA+                  PNR+LL ADA L NCDAVR LF N PGD+S LL+ +VLQREGF++ APHRLR              PK      FFLG+FP EL++A+WVE++AASPVR+SGT++ALE+ KVGR+ GSAK++   T
Sbjct:   64 VLNSSVLHHCASRFITKLADSVLSVSCAL------------------PNRDLLTADAKLTNCDAVRPLFSNYPGDNSNLLNSLVLQREGFKSTAPHRLR--------------PKKT----FFLGEFPAELKEATWVEVLAASPVRLSGTIIALEQLKVGRVPGSAKSMDNAT 200          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5K101_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K101_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.110e-27
Identity = 79/255 (30.98%), Postives = 119/255 (46.67%), Query Frame = 1
Query:  124 VKAENFPNRELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRVCSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGTVVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTK-PTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNRE 885
            + A   PN++LL AD  L   + V   F    GD+ + L  +VL + G E+  P+++                                   A++VE  AA P+R  G VVALE  +V  + G+AK  MRGT  FY +N+ ++  +LP   T +       L G K P    L  L GAR+S +R ++D+ LDK   L+    L +    SE NL +Y E+G+IPK + D+++   D  N  A   ST+   + E
Sbjct:  129 ISASEIPNKQLLRADEALRKHERVMATFRGYAGDTERELGTLVLSKFGIESEEPYKIH---------------------------------KATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGFPLGKSLPISEENLDSYSENGAIPKVLLDSILTSNDPLNVHARVSSTYTRSSDE 350          
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 6.160e-17
Identity = 77/259 (29.73%), Postives = 114/259 (44.02%), Query Frame = 1
Query:  508 MRGTFTFYMHNAYAIGRQLPACDTDVAGSFACALVGTK-PTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQESEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNRE--PEETVNSANSRESDSAPAPRDGDLGQSDXXXXRAPAPCIIETNAVVSTGSDMAKSSHYKPSRLRMLGSAMRENGSAGTTADTSAASLGRQANAEAAAAAGLAPPVLPSNAMVITHTGNMVSDFFEKGLFV 1275
            MRGT  FY +N+ ++  +LP   T +       L G K P    L  L GAR+S +R ++D+ LDK   L+    LA+    SE NL +Y E+G+IPK + D+++   D  N  A   ST+   + E   E+   S +                  D    +A   C+++  AVV  G D A S+   P  +R LGS +                     +AEAA   G  PP   SNA+V+ H G ++ D      +V
Sbjct:    1 MRGTSVFYANNSSSVTTELPLVATGLLDMITVVLAGKKNPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGFPLAKSLPISEENLDSYSENGAIPKVLLDSILTSNDPLNVHARVSSTYTRSSDEIGTEKVTISDDXXXXXXXXXXXXXXXAGDDLEDGKA---CVLQNYAVVDPGEDTATSAERLPDAMRTLGSEL---------------------DAEAALRRGQPPPGGTSNALVVPH-GEILDDCNNNSAWV 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12272.1879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5L0L4_9PHAE2.670e-13656.44Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K8N9_9PHAE5.180e-13156.68Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5JN07_9PHAE2.320e-12855.40ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G3U9_ECTSI1.630e-11756.16ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5KIB1_9PHAE3.380e-11350.47ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KTA2_9PHAE1.820e-10044.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J5A5_9PHAE1.590e-7746.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K882_9PHAE1.010e-3750.87ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K101_9PHAE2.110e-2730.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K657_9PHAE6.160e-1729.73Helitron_like_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12272contigL-elsbetiae_contig12272:3107..4513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score415.6
Seed ortholog evalue2.8e-113
Seed eggNOG ortholog2880.D7FSK0
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Exons2
Model size1279
Cds size1278
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815425.3613956-CDS-L-elsbetiae_contig12272:3107..43141622815425.3613956-CDS-L-elsbetiae_contig12272:3107..4314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12272 3108..4314 -
1691682891.6773322-CDS-L-elsbetiae_contig12272:3107..43141691682891.6773322-CDS-L-elsbetiae_contig12272:3107..4314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12272 3108..4314 -
1622815425.379975-CDS-L-elsbetiae_contig12272:4442..45131622815425.379975-CDS-L-elsbetiae_contig12272:4442..4513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12272 4443..4513 -
1691682891.690573-CDS-L-elsbetiae_contig12272:4442..45131691682891.690573-CDS-L-elsbetiae_contig12272:4442..4513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12272 4443..4513 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12272.1879.1prot_L-elsbetiae_contig12272.1879.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12272 3108..4513 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12272.1879.1

>prot_L-elsbetiae_contig12272.1879.1 ID=prot_L-elsbetiae_contig12272.1879.1|Name=mRNA_L-elsbetiae_contig12272.1879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=426bp
VLHPSVLHKCAADFVAAIVGSALSVSCAVCDLLCTEMSCEWVKAENFPNR
ELLVADAMLINCDAVRHLFFNLPGDSSKLLDGVVLQREGFETNAPHRLRV
CSTCLDDLRDNKLPKAAKANGFFLGDFPEELRDASWVEMIAASPVRMSGT
VVALEEFKVGRLSGSAKTLMRGTFTFYMHNAYAIGRQLPACDTDVAGSFA
CALVGTKPTLDQLRHLFGARRSKVRALLDFQLDKNNTLIGVHKLAREAQE
SEANLRTYPEDGSIPKAIQDALIPVTDRGNSVANARSTHAHGNREPEETV
NSANSRESDSAPAPRDGDLGQSDDDDDRAPAPCIIETNAVVSTGSDMAKS
SHYKPSRLRMLGSAMRENGSAGTTADTSAASLGRQANAEAAAAAGLAPPV
LPSNAMVITHTGNMVSDFFEKGLFVG
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mRNA from alignment at L-elsbetiae_contig12272:3107..4513-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12272.1879.1 ID=mRNA_L-elsbetiae_contig12272.1879.1|Name=mRNA_L-elsbetiae_contig12272.1879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1407bp|location=Sequence derived from alignment at L-elsbetiae_contig12272:3107..4513- (Laminarionema elsbetiae ELsaHSoW15)
GTCTTGCACCCGTCCGTGCTGCACAAGTGTGCTGCAGACTTCGTTGCTGC TATTGTGGGCTCCGCGCTCAGGTGATGCATACGCACAGCAAATATATATT GGTTGCGTTAGCACGTTATAACCGTGTTCTCGAACTTCGTACTCTTGTTT TGTGTTTTTTCACATTCGTCCACCCTTGCTTCTGCTTTATTTTTCACAGC GTGTCGTGTGCAGTGTGCGATCTGCTTTGCACCGAGATGAGCTGCGAATG GGTCAAGGCTGAGAACTTTCCCAACAGGGAATTGCTTGTGGCCGATGCGA TGCTGATCAATTGCGACGCGGTGAGGCATTTGTTTTTCAATTTACCTGGC GACAGCAGCAAACTTCTGGATGGTGTTGTACTGCAACGCGAAGGCTTTGA GACGAACGCACCGCACCGACTTCGTGTATGTTCAACATGCCTTGACGATC TCCGAGATAACAAGCTGCCAAAAGCAGCGAAAGCCAACGGTTTTTTCCTC GGAGACTTCCCGGAAGAATTGCGAGACGCCAGTTGGGTGGAGATGATTGC GGCAAGCCCAGTAAGGATGAGCGGAACTGTCGTCGCGCTTGAAGAATTCA AAGTTGGTCGCCTATCCGGCTCAGCGAAAACATTGATGCGCGGAACCTTC ACCTTCTATATGCACAACGCCTACGCCATTGGGCGTCAACTTCCCGCATG CGATACCGATGTCGCTGGGTCGTTCGCTTGTGCTCTGGTGGGCACTAAAC CCACTTTGGATCAACTTCGGCACTTGTTCGGAGCGCGGAGATCGAAGGTT CGAGCACTTTTGGACTTCCAACTTGACAAAAACAATACGTTGATTGGAGT CCACAAGCTAGCCCGAGAAGCCCAGGAATCGGAAGCCAACCTTCGGACAT ACCCTGAGGACGGATCTATTCCGAAGGCCATTCAAGACGCGCTTATTCCC GTCACTGATAGAGGCAACTCCGTTGCGAACGCGCGATCCACGCACGCTCA TGGGAACCGCGAGCCCGAGGAAACCGTCAACAGCGCTAATAGCCGCGAGA GCGACTCAGCGCCAGCGCCCCGAGACGGTGACCTGGGTCAAAGCGACGAC GACGACGATCGCGCTCCTGCGCCCTGCATCATCGAGACGAATGCCGTTGT ATCCACCGGTAGCGACATGGCGAAATCATCGCACTACAAGCCCTCTCGTC TGCGAATGCTAGGATCCGCCATGAGAGAAAATGGCTCTGCTGGAACAACC GCCGACACCAGTGCCGCCTCACTTGGCCGCCAGGCGAACGCTGAAGCCGC CGCCGCTGCGGGATTGGCCCCGCCAGTCCTCCCTTCAAACGCCATGGTCA TAACCCACACCGGAAACATGGTCTCTGACTTCTTTGAGAAAGGCTTGTTC GTCGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12272:3107..4513-

>mRNA_L-elsbetiae_contig12272.1879.1 ID=mRNA_L-elsbetiae_contig12272.1879.1|Name=mRNA_L-elsbetiae_contig12272.1879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2556bp|location=Sequence derived from alignment at L-elsbetiae_contig12272:3107..4513- (Laminarionema elsbetiae ELsaHSoW15)
GTCTTGCACCCGTCCGTGCTGCACAAGTGTGCTGCAGACTTCGTTGCTGC
TATTGTGGGCTCCGCGCTCAGGTCTTGCACCCGTCCGTGCTGCACAAGTG
TGCTGCAGACTTCGTTGCTGCTATTGTGGGCTCCGCGCTCAGCGTGTCGT
GTGCAGTGTGCGATCTGCTTTGCACCGAGATGAGCTGCGAATGGGTCAAG
GCTGAGAACTTTCCCAACAGGGAATTGCTTGTGGCCGATGCGATGCTGAT
CAATTGCGACGCGGTGAGGCATTTGTTTTTCAATTTACCTGGCGACAGCA
GCAAACTTCTGGATGGTGTTGTACTGCAACGCGAAGGCTTTGAGACGAAC
GCACCGCACCGACTTCGTGTATGTTCAACATGCCTTGACGATCTCCGAGA
TAACAAGCTGCCAAAAGCAGCGAAAGCCAACGGTTTTTTCCTCGGAGACT
TCCCGGAAGAATTGCGAGACGCCAGTTGGGTGGAGATGATTGCGGCAAGC
CCAGTAAGGATGAGCGGAACTGTCGTCGCGCTTGAAGAATTCAAAGTTGG
TCGCCTATCCGGCTCAGCGAAAACATTGATGCGCGGAACCTTCACCTTCT
ATATGCACAACGCCTACGCCATTGGGCGTCAACTTCCCGCATGCGATACC
GATGTCGCTGGGTCGTTCGCTTGTGCTCTGGTGGGCACTAAACCCACTTT
GGATCAACTTCGGCACTTGTTCGGAGCGCGGAGATCGAAGGTTCGAGCAC
TTTTGGACTTCCAACTTGACAAAAACAATACGTTGATTGGAGTCCACAAG
CTAGCCCGAGAAGCCCAGGAATCGGAAGCCAACCTTCGGACATACCCTGA
GGACGGATCTATTCCGAAGGCCATTCAAGACGCGCTTATTCCCGTCACTG
ATAGAGGCAACTCCGTTGCGAACGCGCGATCCACGCACGCTCATGGGAAC
CGCGAGCCCGAGGAAACCGTCAACAGCGCTAATAGCCGCGAGAGCGACTC
AGCGCCAGCGCCCCGAGACGGTGACCTGGGTCAAAGCGACGACGACGACG
ATCGCGCTCCTGCGCCCTGCATCATCGAGACGAATGCCGTTGTATCCACC
GGTAGCGACATGGCGAAATCATCGCACTACAAGCCCTCTCGTCTGCGAAT
GCTAGGATCCGCCATGAGAGAAAATGGCTCTGCTGGAACAACCGCCGACA
CCAGTGCCGCCTCACTTGGCCGCCAGGCGAACGCTGAAGCCGCCGCCGCT
GCGGGATTGGCCCCGCCAGTCCTCCCTTCAAACGCCATGGTCATAACCCA
CACCGGAAACATGGTCTCTGACTTCTTTGAGAAAGGCTTGTTCGTCGGGC
GTGTCGTGTGCAGTGTGCGATCTGCTTTGCACCGAGATGAGCTGCGAATG
GGTCAAGGCTGAGAACTTTCCCAACAGGGAATTGCTTGTGGCCGATGCGA
TGCTGATCAATTGCGACGCGGTGAGGCATTTGTTTTTCAATTTACCTGGC
GACAGCAGCAAACTTCTGGATGGTGTTGTACTGCAACGCGAAGGCTTTGA
GACGAACGCACCGCACCGACTTCGTGTATGTTCAACATGCCTTGACGATC
TCCGAGATAACAAGCTGCCAAAAGCAGCGAAAGCCAACGGTTTTTTCCTC
GGAGACTTCCCGGAAGAATTGCGAGACGCCAGTTGGGTGGAGATGATTGC
GGCAAGCCCAGTAAGGATGAGCGGAACTGTCGTCGCGCTTGAAGAATTCA
AAGTTGGTCGCCTATCCGGCTCAGCGAAAACATTGATGCGCGGAACCTTC
ACCTTCTATATGCACAACGCCTACGCCATTGGGCGTCAACTTCCCGCATG
CGATACCGATGTCGCTGGGTCGTTCGCTTGTGCTCTGGTGGGCACTAAAC
CCACTTTGGATCAACTTCGGCACTTGTTCGGAGCGCGGAGATCGAAGGTT
CGAGCACTTTTGGACTTCCAACTTGACAAAAACAATACGTTGATTGGAGT
CCACAAGCTAGCCCGAGAAGCCCAGGAATCGGAAGCCAACCTTCGGACAT
ACCCTGAGGACGGATCTATTCCGAAGGCCATTCAAGACGCGCTTATTCCC
GTCACTGATAGAGGCAACTCCGTTGCGAACGCGCGATCCACGCACGCTCA
TGGGAACCGCGAGCCCGAGGAAACCGTCAACAGCGCTAATAGCCGCGAGA
GCGACTCAGCGCCAGCGCCCCGAGACGGTGACCTGGGTCAAAGCGACGAC
GACGACGATCGCGCTCCTGCGCCCTGCATCATCGAGACGAATGCCGTTGT
ATCCACCGGTAGCGACATGGCGAAATCATCGCACTACAAGCCCTCTCGTC
TGCGAATGCTAGGATCCGCCATGAGAGAAAATGGCTCTGCTGGAACAACC
GCCGACACCAGTGCCGCCTCACTTGGCCGCCAGGCGAACGCTGAAGCCGC
CGCCGCTGCGGGATTGGCCCCGCCAGTCCTCCCTTCAAACGCCATGGTCA
TAACCCACACCGGAAACATGGTCTCTGACTTCTTTGAGAAAGGCTTGTTC
GTCGGG
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