mRNA_L-elsbetiae_contig1227.1878.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: D8LIT8_ECTSI (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIT8_ECTSI) HSP 1 Score: 388 bits (996), Expect = 1.060e-125 Identity = 272/411 (66.18%), Postives = 289/411 (70.32%), Query Frame = 1 Query: 16 MRAERKQRRKLARETRVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTS------SAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTL--------------AAAAAADAGSGDEGT---PPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 MR ERK+RRKLAR+ R LNVGRAKSVRRAG+STE VGLEALHPPQGPPGSGAPALSGLPD+SKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERAL QAGL SAAEVDAVAVTVGPGLEICLRVG EKAKALAA++GKPFVA+HHLEAHALLARK+F A+ SA + DVSAAAA S APS+ +FA AFTAAV+DVS XXX G VSA XXXXXXXXXXXX X DV +S AP AA + A D+ T PPLEFPFLALLVSGGHCQLLLCEGVG+YTVLGGTVDDALGEAYDK Sbjct: 1 MREERKRRRKLARDARKLNVGRAKSVRRAGTSTEKVGLEALHPPQGPPGSGAPALSGLPDVSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALEQAGLGSAAEVDAVAVTVGPGLEICLRVGAEKAKALAAEYGKPFVAIHHLEAHALLARKSFTETRASSPSAXXXXXXXXXXXXX-----------XXXRSSDVSAAAAVASSAPSTSAFATAFTAAVSDVSASXXXXXXXXXXXXXXXXXXXXXXXGPGDVSAXXXXXXXXXXXXXFXAAFSAAVTDVSSASARA----ASGVAPPAXXXXXXXXXXXCKGAAGSGTSAVDDDDDTGETPPLEFPFLALLVSGGHCQLLLCEGVGVYTVLGGTVDDALGEAYDK 396
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA) HSP 1 Score: 205 bits (522), Expect = 8.720e-59 Identity = 136/325 (41.85%), Postives = 155/325 (47.69%), Query Frame = 1 Query: 205 PFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 PFTVLGIETSCDDT AAVVRSDG +LGEA+A Q D+HE+WGGVVPGLAR++H ++D +V AL QAG+ASAA+VDAVAVTVGPGLEICLRVG EKAKALA +H KPFVAVHHLEAH +LAR G+ A +EG P FPFLALLVSGGHCQLLLCEGVG +++LGGTVDDALGEA+DK Sbjct: 18 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARA----------------------------------------------------------------------------------------------GLGA-------------------------------------------------------EEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDK 193
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A7S2YT17_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT17_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.370e-55 Identity = 145/373 (38.87%), Postives = 178/373 (47.72%), Query Frame = 1 Query: 61 RVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 R L VG AK+V R G +T + P G G A+SGLPD +K FTVLGIE+SCDDT AAVVRSDG +LGEA+A Q ++HE+WGGVVPGLARD+H ++D VV +AL AG++SAAEVDA+ VTVGPGLEICLRVG+ KA LA+++ KPFV +HHLEAH L+AR +PSS S+ H T A+ T +EFPF ALLVSGGHCQ++ C GVG YT+LGGT DD+LGEA+DK Sbjct: 84 RKLKVGIAKAVDR-GQFADT------YKPGGADGKTFQAISGLPDRTKLFTVLGIESSCDDTGAAVVRSDGVILGEALASQQEIHEQWGGVVPGLARDAHQEQIDSVVSQALTNAGMSSAAEVDAIGVTVGPGLEICLRVGSTKAIQLASEYQKPFVGIHHLEAHILMAR--------------------------------------------------------------------------------------LPSSISNE---------------------------------------EELIHITATEDTHAS---------TRAIEFPFFALLVSGGHCQMMRCSGVGNYTILGGTTDDSLGEAFDK 315
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A7S4J610_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J610_9STRA) HSP 1 Score: 198 bits (503), Expect = 9.300e-55 Identity = 138/369 (37.40%), Postives = 175/369 (47.43%), Query Frame = 1 Query: 73 VGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 +G AK+V R +T ++ P G G A+SGLPD +KPFTVLGIE+SCDDT AAVVRSDG +LGEA+A Q ++HEEWGG+VPGLAR +H K+DG++ AL AG++S +VDA+ VTVGPGLEICLRVG KA+ LA ++GKPFV +HHLEAH L+AR + GD S + F + A D+ E +EFPFLALLVSGGHCQLL C +G Y++LGGT+DD+LGEA+DK Sbjct: 113 IGMAKAVDRGQWAT-------VYKPGGEDGGTFTAISGLPDRTKPFTVLGIESSCDDTGAAVVRSDGVILGEALASQHEIHEEWGGIVPGLARTAHEEKIDGIIHEALQNAGMSSVEDVDAIGVTVGPGLEICLRVGCNKARDLAEKYGKPFVGIHHLEAHILMARLPY---------------------------------------GD------------SDDLF---ISPATEDM----------------------------------------------------------------------------------HEAARAIEFPFLALLVSGGHCQLLKCLDIGKYSILGGTMDDSLGEAFDK 338
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.300e-54 Identity = 146/377 (38.73%), Postives = 167/377 (44.30%), Query Frame = 1 Query: 61 RVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLAR----KAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 R + VG AKSV R G ++ +PP P A SGLPDL+KPFTVLGIETSCDDT AVVRSDGA+LGEA+ GQAD+H EWGGVVP LA D+H + V+ AL +AGL S A+VDA+ VTVGPGLE+CLRVG AKALA +H PFV VHHLEAH L+AR PP P D V D L +PFLALLVSGGHCQLLL EG G Y+V+GGT+DDALGEAYDK Sbjct: 72 RRIGVGLAKSVEREGVYSK------FNPPSVFPSDPPEAKSGLPDLTKPFTVLGIETSCDDTGVAVVRSDGAILGEAVVGQADIHAEWGGVVPNLAMDAHKSAIQSTVQLALERAGLKSPADVDAIGVTVGPGLEVCLRVGAGAAKALALEHRLPFVGVHHLEAHCLMARIPSSPLVPPTPYQDQKE------------------------------------------------------LVED----------------------------------------------------------------------------------------ELVYPFLALLVSGGHCQLLLVEGAGRYSVVGGTLDDALGEAYDK 300
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A7S2RZ45_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZ45_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.150e-54 Identity = 144/387 (37.21%), Postives = 181/387 (46.77%), Query Frame = 1 Query: 19 RAERKQRRKLARETRVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 R +RK+ +K ++ R +G AK+V R S ++ P G G+ A SGLPD ++PFTVLGIE+SCDDT AAVVRSDG +LGE++A Q +HEEWGGVVPGLA+ +H K+D V+E A+ AGL+S E+DA+ VTVGPGLEICLRVG KA+ LA Q KPFVA+HHLEAH L+AR PP S S D+ SH E ++FPFLALLVSGGHCQ+L C GVG Y+++GGT+DD+LGEAYDK Sbjct: 15 RIKRKRNKKAGKDKRSEFIGMAKAVDRGQWSV-------VYSPGGKDGTSFVAKSGLPDKTRPFTVLGIESSCDDTGAAVVRSDGVILGESLASQHKIHEEWGGVVPGLAKLAHEEKIDVVIEEAIQNAGLSSIDEIDAIGVTVGPGLEICLRVGCNKARELAIQFQKPFVAIHHLEAHILMAR--LPPQKKEQQSTS-----------------------------------------------------------------------------------------------------------IDIV-----------SH-----------------ESNCAIQFPFLALLVSGGHCQMLKCLGVGRYSIIGGTIDDSLGEAYDK 257
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: W7TQK2_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQK2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.340e-51 Identity = 143/338 (42.31%), Postives = 156/338 (46.15%), Query Frame = 1 Query: 175 ALSGLPDLSKP---FTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 A SGLP S FTVLGIETSCDDT AVVRSDG +LGEA+A Q +HE+WGGVVPGLARD+HA +D +VE AL +AG+AS AEV AV VTVGPGLEICLRVGTE AKALA KPFVAVHHLEAH L+AR P S P E AA T+A S P+P P FPFLALLVSGGHC LL C GVG Y LGGT+DDALGEAYDK Sbjct: 134 AASGLPTTSPEDPVFTVLGIETSCDDTGVAVVRSDGVILGEALASQYKIHEQWGGVVPGLARDAHASVIDSMVEEALKKAGMASVAEVGAVGVTVGPGLEICLRVGTETAKALATTFHKPFVAVHHLEAHCLMARFGQP----------------------------------------------LDSREPKEE---AAGTSA---------------SSPIP----------------------------------------------------------------------PQTRFPFLALLVSGGHCMLLECWGVGRYRTLGGTLDDALGEAYDK 337
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A7S2UND7_9STRA (N(6)-L-threonylcarbamoyladenine synthase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UND7_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.590e-49 Identity = 102/177 (57.63%), Postives = 127/177 (71.75%), Query Frame = 1 Query: 49 ARETRVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSGAPALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAF 579 A+E R +G AK+V R ++ + P G G+ A SGLPD +KPF VLGIE+SCDDT AAVVRSDG +LGE++A Q ++HE WGGVVP LA+ +H K+D V+ RAL +AGL+S A+VDA+ VTVGPGLEICLRVG AKALA ++ KPFV VHHLEAH L+AR F Sbjct: 107 AKEKRRQFIGMAKAVDRGQTANR-------YNPGGNDGASFVAKSGLPDRTKPFLVLGIESSCDDTGAAVVRSDGVILGESLASQHEIHEAWGGVVPNLAKAAHEEKIDEVIARALEEAGLSSPADVDAIGVTVGPGLEICLRVGCNTAKALAQKYEKPFVGVHHLEAHILMARLPF 276
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: A0A1Z5K725_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K725_FISSO) HSP 1 Score: 181 bits (460), Expect = 5.200e-49 Identity = 124/335 (37.01%), Postives = 148/335 (44.18%), Query Frame = 1 Query: 175 ALSGLPDLSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAPAADASASSAAVYSSGASGVGVGSAPRSGPGETFAAGDVSAAAAAXSGAPSSESFAAAFTAAVTDVSIPSAAGPXXXSDPVPSSTSSAGGVSAAXXXXXXXXXXXXXXXXXXXXXXDVXXXXXXXXXXXSSHFAPTLAAAAAADAGSGDEGTPPLEFPFLALLVSGGHCQLLLCEGVGLYTVLGGTVDDALGEAYDK 1179 ALSGLP + FTVLGIE+SCDDT AAVVRSDG +LGEA+A Q+ +H WGGVVPGLA+++H ++D +V+ AL AG+ SAA+VDA+ VTVGPGLEICLRVG KA+ALA ++ KPFV VHHLEAH L+AR + D + LEFPFLALLVSGGHCQLL C G+G VLGGT DD+LGEAYDK Sbjct: 101 ALSGLPPNLQNFTVLGIESSCDDTGAAVVRSDGTILGEALASQSHIHAPWGGVVPGLAKEAHEAEIDRIVQEALEAAGMTSAADVDAIGVTVGPGLEICLRVGATKARALAIEYQKPFVGVHHLEAHILMARLPY-------------------------------------------------------------------------------------------------------------------------------------------------------DSASKQLEFPFLALLVSGGHCQLLKCTGIGDMAVLGGTFDDSLGEAYDK 284
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Match: R1CZN8_EMIHU (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZN8_EMIHU) HSP 1 Score: 180 bits (456), Expect = 1.480e-48 Identity = 97/132 (73.48%), Postives = 108/132 (81.82%), Query Frame = 1 Query: 196 LSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALGQAGLASAAEVDAVAVTVGPGLEICLRVGTEKAKALAAQHGKPFVAVHHLEAHALLARKAFPPAP 591 L +PFTVLGIETSCDDT AVVRSDG +LGEAIA QA++HE WGGVVPG+ARD+H + G VE AL +AGL+SAAEVDAVAVTVGPGLEICLRVG E+A LA HGK FVAVHHLEAH L+AR A P P Sbjct: 60 LREPFTVLGIETSCDDTGVAVVRSDGEILGEAIASQAELHEAWGGVVPGIARDAHRDALGGAVELALRRAGLSSAAEVDAVAVTVGPGLEICLRVGCEEAVRLATAHGKAFVAVHHLEAHVLMARLACHPPP 191 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1227.1878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1227.1878.1 >prot_L-elsbetiae_contig1227.1878.1 ID=prot_L-elsbetiae_contig1227.1878.1|Name=mRNA_L-elsbetiae_contig1227.1878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp MRAERKQRRKLARETRVLNVGRAKSVRRAGSSTETVGLEALHPPQGPPGSback to top mRNA from alignment at L-elsbetiae_contig1227:23811..27580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1227.1878.1 ID=mRNA_L-elsbetiae_contig1227.1878.1|Name=mRNA_L-elsbetiae_contig1227.1878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3770bp|location=Sequence derived from alignment at L-elsbetiae_contig1227:23811..27580+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1227:23811..27580+ >mRNA_L-elsbetiae_contig1227.1878.1 ID=mRNA_L-elsbetiae_contig1227.1878.1|Name=mRNA_L-elsbetiae_contig1227.1878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2328bp|location=Sequence derived from alignment at L-elsbetiae_contig1227:23811..27580+ (Laminarionema elsbetiae ELsaHSoW15)back to top |