mRNA_L-elsbetiae_contig12268.1876.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D8LU06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU06_ECTSI) HSP 1 Score: 158 bits (400), Expect = 5.390e-44 Identity = 91/219 (41.55%), Postives = 126/219 (57.53%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVYGFHRAIEQDAYIAKTGLGATGLE--------RNADVSSQAIHSQPPS--SDPTQAEFTKVKRIEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVFPSP 691 Q+ +AATE +++++V +RA EQ + + AT E R +D ++ H P SD V+ + FE LE AVDRPS+RGG GGL+IN L+ K +G+ H ALER+GRCVE+ E+YPGL R + HLAH+ L AA+G A+ ++D+LR +YN P GS VPPL EW V CD + CRAM+ SGK+ +P Sbjct: 14 QLKEAATEVDLYQYVAQSYRAYEQILHQLPSKQIATTCENPCDAESDRGSDSGRRSDHVFLPREVSDAIGTYLESVRCLSFEPLEEAVDRPSVRGGFGGLLINLGLIFTKAAQGDLHAALERIGRCVEVCERYPGLCRSTVGCHLAHIALVSLAAVGGSRAQTMYDRLRGSYNSCRPAGSRPVPPLEEWDRVDAFCDDSFCRAMDL--ASGKLKALSAP 230
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D8LU08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU08_ECTSI) HSP 1 Score: 160 bits (404), Expect = 3.580e-42 Identity = 93/237 (39.24%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVYGFHRAIEQDAYIAKTGLGATGLER--------NADVSSQAIHSQPPSSDPTQAEFTKVKR--IEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVFP------SPLPSEAAVSSRAE 727 Q+ +AATE E++++V RA EQ ++ + AT + +D Q+ H P ++FE LE AVDRPS+RGGIG L +NS LV +K KG+ H AL+R+GRCV+I+E+YPGL R + HLAH++L AA+G P A+ ++D+LR +YN P GS VPPL EW GV CD CRA++ K P +P+ +E A + RA+ Sbjct: 268 QLKEAATEVELYQYVAQSFRAFEQTVHVTASINSATAGDHLCQAASDGRSDTLLQSDHVLLPGEVANAMGTVSASGNFLDFEPLEEAVDRPSVRGGIGSLQVNSTLVFKKAAKGDVHGALKRVGRCVQIFERYPGLCRSMIGCHLAHMMLVSLAAIGDPRAQAMYDRLRESYNSCRPSGSRLVPPLEEWHGVVAFCDDVYCRAIDLFAHKLKAFSAPPVNSIDAPVETEGADADRAK 504
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: A0A6H5KED9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED9_9PHAE) HSP 1 Score: 152 bits (385), Expect = 6.110e-42 Identity = 86/202 (42.57%), Postives = 118/202 (58.42%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVYGFHRAIEQDAY------IAKTG--LGATGLERNADVSSQAIHSQPPSSDPTQAEFTKVKR--IEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACR 640 Q+ +AATE E+++FV RA EQ + AK G L + +D ++ H P ++FE LE AVDRPS+RGGIG L +NS LV +K KG+ H AL+R+GRCVEI+E+YPGL R + HLAH++L AA+G+P A+ + D+LR +YN P GS +PPL EW+G+ CD CR Sbjct: 37 QLKEAATEVELYQFVAQSFRAFEQTVHETASINSAKAGDHLCEAAADGRSDTLLRSDHVLLPGEVANAMGTVSASGNFLDFEPLEEAVDRPSVRGGIGSLQVNSTLVFKKAAKGDLHGALKRIGRCVEIFERYPGLCRSMIGCHLAHMMLVSLAAIGTPRAQAMHDRLRESYNSCCPSGSRLIPPLEEWRGLDAFCDDLYCR 238
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 153 bits (387), Expect = 1.020e-39 Identity = 91/236 (38.56%), Postives = 119/236 (50.42%), Query Frame = 2 Query: 14 VQRDKPPQAHAHTSLVVQIGKAATEAEIFRFVYGFHRAIEQDAYIAKTGLGATGLERNADVSSQAIHSQPPSSDPTQAEFT-------------KVKRIEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVF 682 VQ + PP Q+ ATEAE++++V RA E+ Y T A G D+ H +P P+ +F I FE LE AVDRPSIRGGIG L+IN LV EK KG+ LER+GRC+E+ E+YPGL R + H+ H++L A G AR ++D++R A+N P G VPP EW GV CD CRA+E SG + F Sbjct: 194 VQENNPPP---------QLSVVATEAELYQYVAQSCRAFERAVYTTATEQSARG----GDMCDSESHGRPDGVRPSPQDFMAGDLSNAMGVLLENGSCIHFEPLEEAVDRPSIRGGIGALLINGILVFEKAAKGDLRATLERIGRCIEVLERYPGLCRCMIGCHMTHMMLICLVAAGDSSARAMYDRVRGAFNSHRPSGYLPVPPFEEWCGVDAFCDHRCCRAIEGLVKSGNMRAF 416
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.140e-37 Identity = 88/221 (39.82%), Postives = 122/221 (55.20%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVY----GFHRAIEQDAYIAKTGLGATGLERNADVSSQAIHSQPPSSDPTQAEFTKV--------KRIEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVFPSP 691 Q+ A E E++++V F +A +Q AY+ T E A+ ++ ++ P+S E ++ + FE LE AVDRPSIRGGIG L+IN LV EK KG+ LER+GRCVE++E YPG+ R +A H AH++L AA+G AR ++D+LR +YN P S VPP EWQG+ CD CRAME S + F +P Sbjct: 320 QVADVAAEGELYKYVAHSFKAFEQAFQQKAYMQSARDVDTPGE--AEGHGESDRNRWPASAFLPGEISEAMGTVFGDRNLLVFEPLEEAVDRPSIRGGIGSLLINGTLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAMEGLVASDLMKAFSAP 538
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.860e-37 Identity = 83/214 (38.79%), Postives = 118/214 (55.14%), Query Frame = 2 Query: 32 PQAHAHTSLVVQIGKAATEAEIFRFVYGFHRAIEQ----DAYIAKTGLGATGLERNADVSSQA---IHSQPPSSDPTQAEFTKVKRIEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEF 652 P + +SL Q+ AA+E E++ F+ +R EQ AY+ + G E A + + + + T A +FE LE A DRP IR GIGGLIIN LV EK KG+ A+ER+ RCVE++E +PG+ R + SH+AH++++ AA+G+ R ++D+LR AYN SS +PP EWQGV+ CD CR ME Sbjct: 267 PSISSFSSLAAQLRTAASETELYAFMMQAYRQFEQAVYRTAYLESSDAGGLPSENEAGIRTACSCRVREASMAVVDTMASRINNHSCDFERLEDAADRPLIRQGIGGLIINGTLVFEKAAKGDFSGAVERIDRCVEVFETFPGVCRFFMGSHVAHIMVTALAAIGNSRTRGMYDRLRRAYNSTRFPDSSPIPPFEEWQGVSSFCDTFYCRTMEL 480
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.460e-35 Identity = 90/239 (37.66%), Postives = 129/239 (53.97%), Query Frame = 2 Query: 74 KAATEAEIFRFVYGFHRAIE------------------QDAYIAKTGLGATGLERNADVSSQAIHSQPPSSDPTQAEFTKVKRIEFECL---EWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVFPSPLPSEAAVSSRAE 727 + ATEA I R++ +HRAIE DA + G A G + V S+ P S + + +++F L E AV+RP IR G+GGLIIN L K + G+ ALERL RCVE++E +PGL R + +H+AH++LS+AA++G ++++LRNA NL P+GS A PPL EWQG++ CD CR++E KV + P+ P E + R E Sbjct: 262 EVATEAHICRYIMQYHRAIEISIQQALRTPEDTPYVGADDAQYTEDGA-AKGSKAGDRVGGICSLSRNPHSRELICDVVEGIQLQFPGLAHLEDAVERPDIRPGVGGLIINGTLFFNKTVSGDNKGALERLERCVEVFEGFPGLTRFAMGNHMAHVMLSVAASVGDSRDGGLYNRLRNACNLTRPQGSLAFPPLEEWQGISAFCDNVPCRSIEALFARRKVDLPPT-APLEDIKTLRPE 498
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 140 bits (353), Expect = 4.480e-35 Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVYGFHRAIEQ----DAYIAKTGLGATGLERNADVS--SQAIHSQPPSSDPTQAEFTKVKRIEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEF 652 Q+ AA+E E++ F+ +R EQ AY+ + G E A + S + + T A +FE LE DRP IR GIGGLIIN LV EK KG+ A+ER+ RCVE++E +PG+ R + SH+AH++++ A +G AR ++D+LR AYN S+ +PP EWQGV+ CD CR ME Sbjct: 199 QLKAAASETELYAFMMQAYREFEQAVYRTAYLESSDAGGLPSENEAGIRTCSSRVREASMAVVDTMASRISNHSCDFERLEDVADRPLIRQGIGGLIINGTLVFEKAAKGDFTGAVERIDRCVEVFEGFPGVCRFFMGSHVAHIMMTALAVIGDSRARGMYDRLRRAYNSTRLPDSTPIPPFEEWQGVSSFCDTFYCRTMEL 400
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D8LCU9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU9_ECTSI) HSP 1 Score: 132 bits (333), Expect = 7.830e-32 Identity = 82/224 (36.61%), Postives = 119/224 (53.12%), Query Frame = 2 Query: 53 SLVVQIGKAATEAEIFRFVYGFHRAIEQDAY---IAKTGLGATGLERNADVSSQAIHSQPPSSDPTQAEFTKVKR--------IEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFNNGSGKVAVFPSP 691 +L Q+ +AATEAE++R+V A E+ Y I ++ G GL +++ + P D T ++F+K + I+F L+ AVDR SIR GIG L I+ + E KG+ H ER+GRC+E+ E+YPGL R + H+ H+LL AA G R ++D+LR N P GS VP EW+GV CD+ CR++E G + F P Sbjct: 257 NLPPQLNEAATEAELYRYVSRSCVAFEEAIYTTMIEQSESGGNGL-CDSEPHGRPGGVLPLPEDFTASDFSKALKSLLDDGDGIDFGPLQEAVDRSSIRRGIGVLFIDGPCIVETAAKGDLHATRERMGRCIEVLERYPGLCRCMIGCHMTHVLLMCLAAAGDSSDRAVYDRLRVISNSFRPPGSQPVPSFVEWRGVGAFCDEIFCRSIEVLVPCGHMRPFLEP 479
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Match: D7FMR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR8_ECTSI) HSP 1 Score: 125 bits (313), Expect = 5.720e-30 Identity = 76/208 (36.54%), Postives = 111/208 (53.37%), Query Frame = 2 Query: 65 QIGKAATEAEIFRFVYGFHRAIEQDAYIAKTGLGATGLERNADVSSQAIHSQ--------PPSSDPTQAEFTKVKR--IEFECLEWAVDRPSIRGGIGGLIINSALVPEKMLKGNPHEALERLGRCVEIWEQYPGLFRMNLA-SHLAHLLLSIAAAMGSPVAREIFDKLRNAYNLMVPRGSSAVPPLGEWQGVAVICDKAACRAMEFN 655 +I +A + E++R+V + +Q AY AK + R +D +A + P D A T ++ IEF+ LE +RP IR G+GGLIIN LV E+ KG+ LER+ CVE++E+YPGL R + H+AH +L+ AA+ AR ++D+LR YN+ P VP L +WQG+ ICD CR + N Sbjct: 185 RICEAVNDGELYRYVTQSFKVFQQVAY-AKACAKSASRRRLSDDQCRAEGGEGVSAKDCGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLIINGTLVFERAAKGDAEGTLERIRHCVEVFERYPGLCRCTMRWCHIAHAMLAALAAVNGSQARRLYDRLRVVYNVSRPPELRPVPALEDWQGIPSICDDFLCRCIWKN 391 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12268.1876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12268.1876.1 >prot_L-elsbetiae_contig12268.1876.1 ID=prot_L-elsbetiae_contig12268.1876.1|Name=mRNA_L-elsbetiae_contig12268.1876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp MLKGNPHEALERLGRCVEIWEQYPGLFRMNLASHLAHLLLSIAAAMGSPVback to top mRNA from alignment at L-elsbetiae_contig12268:372..2217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12268.1876.1 ID=mRNA_L-elsbetiae_contig12268.1876.1|Name=mRNA_L-elsbetiae_contig12268.1876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1846bp|location=Sequence derived from alignment at L-elsbetiae_contig12268:372..2217- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12268:372..2217- >mRNA_L-elsbetiae_contig12268.1876.1 ID=mRNA_L-elsbetiae_contig12268.1876.1|Name=mRNA_L-elsbetiae_contig12268.1876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig12268:372..2217- (Laminarionema elsbetiae ELsaHSoW15)back to top |