mRNA_L-elsbetiae_contig12261.1874.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: D8LL75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL75_ECTSI) HSP 1 Score: 348 bits (894), Expect = 5.210e-118 Identity = 173/213 (81.22%), Postives = 186/213 (87.32%), Query Frame = 1 Query: 1 AFQVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPVRLAGAAPHLSGEYVGDPEE-------IAAIQERDLKNVYDLSVSKNLEEEEAPRFAAKLDELARPCDVDEFGGPAGGAEEEEEFTGSFLETGV 618 A QVK WRRSWD+PPPPIDKSSKLWPGNNP+YKFL +DGES VPLHESLKDVM+RSS YWDEVIAP IRSGKRVC+CGHENNLRSLLKY+DGISNADIMHVELPRAVPLV++LDE+LRP+RLA +A HLSG YVGDPEE IAAIQERD KNVYDLSVS NLEE PRFAAKLDEL RP DVD+FGGPAGG E +FTGSFLETGV Sbjct: 127 AEQVKIWRRSWDIPPPPIDKSSKLWPGNNPRYKFLMQDGESQVPLHESLKDVMSRSSAYWDEVIAPAIRSGKRVCVCGHENNLRSLLKYIDGISNADIMHVELPRAVPLVYHLDEDLRPMRLANSAEHLSGGYVGDPEEDGTPHPKIAAIQERDRKNVYDLSVSTNLEEVGTPRFAAKLDELGRPWDVDDFGGPAGGGGGEGDFTGSFLETGV 339
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A6H5L2H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H5_9PHAE) HSP 1 Score: 343 bits (879), Expect = 4.970e-114 Identity = 170/206 (82.52%), Postives = 183/206 (88.83%), Query Frame = 1 Query: 1 AFQVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPVRLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLEEEEAPRFAAKLDELARPCDVDEFGGPAGGAEEEEEFTGSFLETGV 618 A QVK WRRSWD+PPPPIDKSSKLWPGNNP+YKFL K+GES VP+HESLKDVM+RSS YWDEVIAP IRSGKRVC+CGHENNLRSLLKY+DGISNADIMHVE+PRAVPLV+YLDE+LRPVRLA +A HLSGE +IAAIQERD KNVYDLSVS NLEE PRFAAKLDEL RPCDVD+FGGPAGG EE E FTGSFLETGV Sbjct: 236 AEQVKIWRRSWDIPPPPIDKSSKLWPGNNPRYKFLMKNGESQVPVHESLKDVMSRSSAYWDEVIAPAIRSGKRVCVCGHENNLRSLLKYIDGISNADIMHVEIPRAVPLVYYLDEDLRPVRLANSAEHLSGE-----RDIAAIQERDRKNVYDLSVSTNLEEVGTPRFAAKLDELGRPCDVDDFGGPAGGGEEGE-FTGSFLETGV 435
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A836CGX1_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX1_9STRA) HSP 1 Score: 256 bits (653), Expect = 5.040e-82 Identity = 124/192 (64.58%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPVRLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLEEEEAPRFAAKLDELARPCDV-DEFGGPAGGAEE 579 QVK WRRS+DV PPPI + S LWPGNN KY FL + +L+P ESL+D ARS WD I PTIRSGKRVC+CGHENNLRSLLK++DG+S+ DI HVELPRAVPL+++LDEN +P+RL GAAPHL+G Y+GD EEIAAI RDL NVYDLSV NLEE + P +AAKLD+L +PC++ D+ G GG +E Sbjct: 116 QVKLWRRSFDVRPPPISEDSSLWPGNNRKYDFLER---ALIPRTESLQDTQARSVDCWDNTIVPTIRSGKRVCVCGHENNLRSLLKHLDGVSDDDIRHVELPRAVPLIYHLDENFKPIRLEGAAPHLNGRYIGDAEEIAAIMARDLANVYDLSVESNLEESDVPHYAAKLDDLLQPCELTDDAFGERGGLDE 304
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A7S3H779_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H779_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.890e-48 Identity = 83/154 (53.90%), Postives = 112/154 (72.73%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDE-NLRPVRLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLS 465 QVK WRRSWD PPPP+ KSS +P + +Y+ L ES +PL ESLKDV R+S +WDEVI P +++ KR+ I GHENNLRSL+K +D ++N DI+HVELPRA+PLV++LD L+P+ G+A +L+G Y+ P E+ I ERD K VYD++ Sbjct: 155 QVKRWRRSWDEPPPPMSKSSPYYPYRDRRYEILGIK-ESDIPLCESLKDVTKRTSAFWDEVIVPQLKNHKRLLIVGHENNLRSLIKRLDNVANEDIIHVELPRAIPLVYHLDPVTLKPLPTPGSADYLNGRYLCTPAELKNIAERDFKQVYDVN 307
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A1E7EWU6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWU6_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.160e-44 Identity = 78/164 (47.56%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLE 483 QVK WRRS+D PPPP+ + P +P+Y+ + + L+P ESL+D ARS VYWD++IAP +R+GK + I GHENNLRSL+ ++GIS D++++ LPRAVPL + LDENL+P+ +L A L GE++G + ++ I ERD K VYD +++KN+E Sbjct: 157 QVKRWRRSYDEPPPPMCNRHQYHPAKDPRYRHM----KDLIPKSESLQDTKARSRVYWDDIIAPELRAGKTLLIVGHENNLRSLIMRLEGISKEDVINLCLPRAVPLAYRLDENLKPLDRPDGKLDEATGFLRGEWLGGDQAVSDILERDHKQVYDTTITKNME 316
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A1Z5KTK1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTK1_FISSO) HSP 1 Score: 158 bits (399), Expect = 1.200e-43 Identity = 85/181 (46.96%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLEEEEAPRFAAKLDELARP 534 QVK WRRS+D PPPP+ + +PG +P+Y+ + +P ESL D M RSSVYWDEVIAP++R GK V I GHENNLRSL+ ++ I DI+++ LPRAVPL + LDENL+PV +L A +L GE++G + + I +RD + VYD ++ NLE F KL ++RP Sbjct: 141 QVKRWRRSYDEPPPPMTRDHPYYPGKDPRYREMLNS----IPESESLHDTMKRSSVYWDEVIAPSLRDGKTVLIVGHENNLRSLIMRLEDIGKEDIINLCLPRAVPLAYRLDENLKPVARQDGKLDEATGYLRGEWLGGDKAVRDILQRDRQQVYDTRITTNLEMSGKDAFH-KLYNISRP 316
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A448Z1V2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1V2_9STRA) HSP 1 Score: 157 bits (396), Expect = 7.030e-43 Identity = 82/170 (48.24%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLEEEEAPR 501 QVK WRRS+D PPP + K P +P+Y+ + + L+P ESLK+ ARSSVYWD+VIAP +R+GK + I GHENNLRS++ ++GI DI+++ LPRAVPL + LDENL+P+ +L A L GE++G + + I ERD K VYD ++ KNLE +A R Sbjct: 186 QVKQWRRSYDQPPPEMCDHHKYHPARDPRYRQM----KHLIPKSESLKETKARSSVYWDDVIAPELRAGKTLLIVGHENNLRSMIMRLEGIPKEDIINLCLPRAVPLAYRLDENLKPIDRPDGKLDEATGFLRGEWLGGDQAVLEILERDRKQVYDTTIRKNLETCDADR 351
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A7S2LGJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGJ2_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.910e-42 Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLE 483 +VK+WRR WD PPPP+D S WPG +P+YK + +P ESLK + R+ YWDE IAP+++ GK V + GHENNLRS++K ++GI + I+++ LPRAVPL + LDENL+P+ ++ A L +++G + + AI +RD K VYD + NLE Sbjct: 177 KVKSWRRGWDDPPPPMDSSHPYWPGKDPRYKLMLDQ----IPPGESLKMTVERAGKYWDEAIAPSLKEGKTVLVVGHENNLRSMIKRLEGICDERIINLSLPRAVPLAYRLDENLKPLGRSDGKMDEATGFLRADWLGGDDAVKAILDRDHKQVYDTKIKHNLE 336
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A7S0PK32_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PK32_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.430e-42 Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLE 483 +VK+WRR WD PPP +D+ WPG +P+YK D +P ESLK M RS YWD+VIAP +R GK + I GHENNLRS++K ++ I + I+ + LPRAVPL + LD NL+P+ +L A L GE++G + + I +RD K VYD SV +NLE Sbjct: 110 KVKSWRRGWDDPPPDMDEDHPYWPGKDPRYK----DMLERIPAAESLKMTMERSGKYWDDVIAPRLREGKTLLIVGHENNLRSMIKRLEDIDDDQIIGLSLPRAVPLAYKLDSNLKPIMPSSGQLDRATGFLRGEWLGGDDAVHKILDRDHKQVYDCSVKENLE 269
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Match: A0A6U9YEY5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9YEY5_9STRA) HSP 1 Score: 154 bits (390), Expect = 7.410e-42 Identity = 81/170 (47.65%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 7 QVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKDVMARSSVYWDEVIAPTIRSGKRVCICGHENNLRSLLKYVDGISNADIMHVELPRAVPLVFYLDENLRPV-----RLAGAAPHLSGEYVGDPEEIAAIQERDLKNVYDLSVSKNLEEEEAPR 501 QV+ WRRS+ PPPP+ K P +P+Y+ + + L+P ESLK+ RS VYWD+VIAP +R+GK + + GHENNLRSL+ ++GIS DI+++ LPRAVPL + LDENL+P+ +L A L GE++G + + I ERD K VYD S+ KNLE +A R Sbjct: 193 QVRRWRRSYAEPPPPMCDHHKYHPARDPRYRQM----KDLIPKSESLKETKDRSRVYWDDVIAPELRAGKTLLVVGHENNLRSLIMRLEGISEEDIINLCLPRAVPLAYRLDENLKPIDRPDGKLDEATGFLRGEWLGGDKAVLDILERDRKQVYDTSIRKNLETCDADR 358 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12261.1874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12261.1874.1 >prot_L-elsbetiae_contig12261.1874.1 ID=prot_L-elsbetiae_contig12261.1874.1|Name=mRNA_L-elsbetiae_contig12261.1874.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp AFQVKTWRRSWDVPPPPIDKSSKLWPGNNPKYKFLSKDGESLVPLHESLKback to top mRNA from alignment at L-elsbetiae_contig12261:171..4413+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12261.1874.1 ID=mRNA_L-elsbetiae_contig12261.1874.1|Name=mRNA_L-elsbetiae_contig12261.1874.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4243bp|location=Sequence derived from alignment at L-elsbetiae_contig12261:171..4413+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12261:171..4413+ >mRNA_L-elsbetiae_contig12261.1874.1 ID=mRNA_L-elsbetiae_contig12261.1874.1|Name=mRNA_L-elsbetiae_contig12261.1874.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig12261:171..4413+ (Laminarionema elsbetiae ELsaHSoW15)back to top |