mRNA_L-elsbetiae_contig1225.1865.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2UWF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF2_9STRA) HSP 1 Score: 197 bits (501), Expect = 3.260e-60 Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYG-DRTGSLDYANYIKAVADHPVVVQFATGEGTERYGS 498 Q KF+ELAQ +GNP ITR EFRE+LE+VGI+ESD EILDRLF+M DKTG+DQI +REF+ GLAPL G DK+ FSFEL D DGTG+++Q +M VL S N+TASYFGDPV+ + Q+++L D+F E +TG+++Y +YI AV +HPV+ QF G GT R+G+ Sbjct: 32 QRKFMELAQREGNPTLITRGEFRESLEVVGIVESDAEILDRLFTMVDKTGDDQIPFREFVVGLAPLITGDAADKIQFSFELYDLDGTGQLQQQEMIDVLTSQNNTASYFGDPVMSKEQIEQLGEDVFREADVSQTGTVNYRDYITAVTNHPVLQQFVAGGGTVRFGT 198
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2FTB5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FTB5_9STRA) HSP 1 Score: 174 bits (440), Expect = 6.460e-51 Identity = 91/172 (52.91%), Postives = 120/172 (69.77%), Query Frame = 1 Query: 1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRT---GS----LDYANYIKAVADHPVVVQFATGEGTERYG 495 Q +F E+A QGN TIT+ EF EAL I+ESD+EILDRLF+M DKTG+ QIN+REFI G++PL G+VE KL F+FE+ D DGTG +K+ +M +L+++NDT+SYFGDPVL R V LV +I+ +Y + GS L Y ++ AVA+HP V F GEGT +YG Sbjct: 33 QREFHEIAMRQGNSHTITKDEFEEALSRCEIVESDSEILDRLFTMLDKTGDQQINFREFICGISPLITGTVEQKLHFAFEMYDVDGTGVVKEPEMNFILMAMNDTSSYFGDPVLTRDDVSTLVDEIYEKYSEEREHGGSGIRVLTYKGFMDAVAEHPKTVAFIRGEGTVKYG 204
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A6U0XRU6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XRU6_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.620e-44 Identity = 78/166 (46.99%), Postives = 116/166 (69.88%), Query Frame = 1 Query: 7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSL-DYANYIKAVADHPVVVQFATGEGTERYGSG 501 +FV+LA GNP TI+RAE +EAL + GI+++D E+LDRLF+MFD+TG+DQ+ +REFI G A L V++KL F+F++ D +G G + ++D+ +VL SIN TASYFGD L QV +LV D+F + G ++ +L Y +++ V +H + F +G+G RYG G Sbjct: 34 QFVDLAHRDGNPATISRAEMQEALSVAGIVDTDKEVLDRLFTMFDRTGDDQVYFREFISGFAALITSDVKEKLHFAFQMYDLEGLGNLAKEDILKVLSSINRTASYFGDACLTEEQVVQLVEDVFQQPGGKSSNLLYYQDFLAPVMEHAHLNTFISGKGPARYGQG 199
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S3H521_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H521_9STRA) HSP 1 Score: 155 bits (392), Expect = 9.700e-44 Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLD----YANYIKAVADHPVVVQFATGEGTERYGSG 501 KF E++ +GN I R EF EAL +VGI ++D +ILDRLF+M+DK+G+DQINYR+FI G+APL G+ ++K+ F+ L D +G+ +K D+ VL +N ASYFGDPV+ Q+ +V+D+ G L+ Y YIK ++DHP+V F TG G+ +YG G Sbjct: 34 KFKEISGREGNSNMINRTEFGEALSIVGINQNDADILDRLFTMYDKSGDDQINYRDFIVGIAPLISGTHQEKIDFALRLFDSEGSSYMKARDIVNVLSQMNRVASYFGDPVMTEEQITSVVVDVQDMAGGAVDGLNDTVHYVEYIKIISDHPIVNTFITGGGSVQYGMG 202
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A482SV94_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV94_9ARCH) HSP 1 Score: 154 bits (389), Expect = 2.740e-43 Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLD----YANYIKAVADHPVVVQFATGEGTERYGSG 501 Q+KF E++ +G P I R +F EAL +VG+ ++D +ILDRLF+M+DK+G+DQI Y++FI G+APL G+ +K+ F F L D DGT +K +M VL +N ASYFGDPV+ QV +V D+ G L+ Y YIK +ADHP+V F +G G+ +YG G Sbjct: 32 QNKFREMSMREGTPNMINRTDFTEALAIVGVNQNDADILDRLFTMYDKSGDDQIIYKDFIVGIAPLISGTHVEKIDFGFRLFDTDGTSYLKAKEMINVLSQMNRVASYFGDPVMTEEQVASVVTDVQEMAGGSVDGLNDAIHYVEYIKIIADHPLVNTFISGGGSVQYGMG 202
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: D7FQ54_ECTSI (Calcium-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ54_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.120e-42 Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 1 Query: 1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRI 270 Q KFVELAQ +GNP+TITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINY+EF+GGLAPLCHG+VE+KLA + C DG I Sbjct: 32 QRKFVELAQREGNPYTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVGGLAPLCHGTVEEKLACVVDWCGGDGVSTI 121
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S1C8Q8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8Q8_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.740e-38 Identity = 69/159 (43.40%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 1 QHKFVELAQAQ-GNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEY-GDRTGSLDYANYIKAVADHPVVVQFAT 471 Q +F+ LA+ N TI R +F +AL +V + ESD E+LDRLF+MFD TG+ QIN++EF+ G++ + G++E+KL FSF + D D +G++ ++M+ VL S+N+T SYFGD +++ LV ++F E+ + G L +A Y+ AVA HP +V F T Sbjct: 32 QKEFLRLAKTNTDNENTINRKQFHDALHIVKVEESDKELLDRLFTMFDDTGDGQINFKEFVCGISTILRGTLEEKLTFSFHMFDVDNSGKVSPEEMKSVLHSMNNTVSYFGDEKADESKIDTLVKEVFAEFDANHDGELSFAEYMHAVAAHPTLVSFVT 190
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2WL49_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL49_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.080e-33 Identity = 67/157 (42.68%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLDYANYIKAVADHPVVVQFATGE 477 +F ++A +G T+ R+E ++AL GIME+D E+LD LFS D N +++++EF+ +P+ G + +KL FSFEL D +G ++++DM VL ++N TAS+FGDP L +++LV IF E G +LDY Y+ AV HP++VQF TGE Sbjct: 82 EFDDIAGLRGKRHTVNRSELQQALAACGIMETDKELLDILFSHMDHDCNGEVDFQEFVASCSPMISGDIAEKLHFSFELYDVSNSGTVRKEDMLTVLNAMNRTASWFGDPCLTAENIRDLVDHIFAEGGGE--ALDYTQYLDAVVSHPILVQFVTGE 236
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A835YSC2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC2_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.220e-33 Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 67 REALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGS----------------LDYANYIKAVADHPVVVQFATGEGTERY 492 REALE GI ++DTE+L RL ++ DKTG++++ F+ GLAPLC GSVE+KL F+ EL D GTGR+ D+ VL +IND A+YFGDP + ++ E+ L YA ++ +ADHPVVV+FA G+GTER+ Sbjct: 12 REALEAAGIGDADTEMLLRLHTLADKTGDERVATAAFLSGLAPLCGGSVEEKLTFALELYDAAGTGRVSAQDLMAVLTAINDAAAYFGDPCVAADEIAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLPYAQHVGDIADHPVVVKFAAGQGTERF 169
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S3ZVE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVE1_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.150e-33 Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGD--RTGSLDYANYIKAVADHPVVVQFATGEGTERYGS 498 K ++A+ +G+ +T+ EF EAL + I +SD +ILDR+F M D+TG D+IN++EFI G+ P G E+ + +FEL ++ + R+ D+ +L+++N ASYFGDPV+ AQV ++V D + ++G L A VADH V +F G+GT RYG+ Sbjct: 35 KLADIAKREGSKDLVTKEEFGEALNGLEITQSDRDILDRIFVMLDRTGEDRINHKEFIVGIVPFALGKTEELIQMAFELFTNNASDRVTPMDLRFILMTLNTVASYFGDPVMTVAQVDKVVDDAADKLDPPPKSGELLMAELSPYVADHEFVHEFVEGKGTSRYGN 200 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1225.1865.1 >prot_L-elsbetiae_contig1225.1865.1 ID=prot_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp MESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELback to top mRNA from alignment at L-elsbetiae_contig1225:7989..10522+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1225.1865.1 ID=mRNA_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2534bp|location=Sequence derived from alignment at L-elsbetiae_contig1225:7989..10522+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1225:7989..10522+ >mRNA_L-elsbetiae_contig1225.1865.1 ID=mRNA_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig1225:7989..10522+ (Laminarionema elsbetiae ELsaHSoW15)back to top |