mRNA_L-elsbetiae_contig1225.1865.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1225.1865.1
Unique NamemRNA_L-elsbetiae_contig1225.1865.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2UWF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF2_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.260e-60
Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 1
Query:    1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYG-DRTGSLDYANYIKAVADHPVVVQFATGEGTERYGS 498
            Q KF+ELAQ +GNP  ITR EFRE+LE+VGI+ESD EILDRLF+M DKTG+DQI +REF+ GLAPL  G   DK+ FSFEL D DGTG+++Q +M  VL S N+TASYFGDPV+ + Q+++L  D+F E    +TG+++Y +YI AV +HPV+ QF  G GT R+G+
Sbjct:   32 QRKFMELAQREGNPTLITRGEFRESLEVVGIVESDAEILDRLFTMVDKTGDDQIPFREFVVGLAPLITGDAADKIQFSFELYDLDGTGQLQQQEMIDVLTSQNNTASYFGDPVMSKEQIEQLGEDVFREADVSQTGTVNYRDYITAVTNHPVLQQFVAGGGTVRFGT 198          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2FTB5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FTB5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.460e-51
Identity = 91/172 (52.91%), Postives = 120/172 (69.77%), Query Frame = 1
Query:    1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRT---GS----LDYANYIKAVADHPVVVQFATGEGTERYG 495
            Q +F E+A  QGN  TIT+ EF EAL    I+ESD+EILDRLF+M DKTG+ QIN+REFI G++PL  G+VE KL F+FE+ D DGTG +K+ +M  +L+++NDT+SYFGDPVL R  V  LV +I+ +Y +     GS    L Y  ++ AVA+HP  V F  GEGT +YG
Sbjct:   33 QREFHEIAMRQGNSHTITKDEFEEALSRCEIVESDSEILDRLFTMLDKTGDQQINFREFICGISPLITGTVEQKLHFAFEMYDVDGTGVVKEPEMNFILMAMNDTSSYFGDPVLTRDDVSTLVDEIYEKYSEEREHGGSGIRVLTYKGFMDAVAEHPKTVAFIRGEGTVKYG 204          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A6U0XRU6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XRU6_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.620e-44
Identity = 78/166 (46.99%), Postives = 116/166 (69.88%), Query Frame = 1
Query:    7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSL-DYANYIKAVADHPVVVQFATGEGTERYGSG 501
            +FV+LA   GNP TI+RAE +EAL + GI+++D E+LDRLF+MFD+TG+DQ+ +REFI G A L    V++KL F+F++ D +G G + ++D+ +VL SIN TASYFGD  L   QV +LV D+F + G ++ +L  Y +++  V +H  +  F +G+G  RYG G
Sbjct:   34 QFVDLAHRDGNPATISRAEMQEALSVAGIVDTDKEVLDRLFTMFDRTGDDQVYFREFISGFAALITSDVKEKLHFAFQMYDLEGLGNLAKEDILKVLSSINRTASYFGDACLTEEQVVQLVEDVFQQPGGKSSNLLYYQDFLAPVMEHAHLNTFISGKGPARYGQG 199          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S3H521_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H521_9STRA)

HSP 1 Score: 155 bits (392), Expect = 9.700e-44
Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 1
Query:    7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLD----YANYIKAVADHPVVVQFATGEGTERYGSG 501
            KF E++  +GN   I R EF EAL +VGI ++D +ILDRLF+M+DK+G+DQINYR+FI G+APL  G+ ++K+ F+  L D +G+  +K  D+  VL  +N  ASYFGDPV+   Q+  +V+D+    G     L+    Y  YIK ++DHP+V  F TG G+ +YG G
Sbjct:   34 KFKEISGREGNSNMINRTEFGEALSIVGINQNDADILDRLFTMYDKSGDDQINYRDFIVGIAPLISGTHQEKIDFALRLFDSEGSSYMKARDIVNVLSQMNRVASYFGDPVMTEEQITSVVVDVQDMAGGAVDGLNDTVHYVEYIKIISDHPIVNTFITGGGSVQYGMG 202          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A482SV94_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV94_9ARCH)

HSP 1 Score: 154 bits (389), Expect = 2.740e-43
Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 1
Query:    1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLD----YANYIKAVADHPVVVQFATGEGTERYGSG 501
            Q+KF E++  +G P  I R +F EAL +VG+ ++D +ILDRLF+M+DK+G+DQI Y++FI G+APL  G+  +K+ F F L D DGT  +K  +M  VL  +N  ASYFGDPV+   QV  +V D+    G     L+    Y  YIK +ADHP+V  F +G G+ +YG G
Sbjct:   32 QNKFREMSMREGTPNMINRTDFTEALAIVGVNQNDADILDRLFTMYDKSGDDQIIYKDFIVGIAPLISGTHVEKIDFGFRLFDTDGTSYLKAKEMINVLSQMNRVASYFGDPVMTEEQVASVVTDVQEMAGGSVDGLNDAIHYVEYIKIIADHPLVNTFISGGGSVQYGMG 202          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: D7FQ54_ECTSI (Calcium-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ54_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.120e-42
Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 QHKFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRI 270
            Q KFVELAQ +GNP+TITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINY+EF+GGLAPLCHG+VE+KLA   + C  DG   I
Sbjct:   32 QRKFVELAQREGNPYTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVGGLAPLCHGTVEEKLACVVDWCGGDGVSTI 121          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S1C8Q8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8Q8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.740e-38
Identity = 69/159 (43.40%), Postives = 107/159 (67.30%), Query Frame = 1
Query:    1 QHKFVELAQAQ-GNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEY-GDRTGSLDYANYIKAVADHPVVVQFAT 471
            Q +F+ LA+    N  TI R +F +AL +V + ESD E+LDRLF+MFD TG+ QIN++EF+ G++ +  G++E+KL FSF + D D +G++  ++M+ VL S+N+T SYFGD     +++  LV ++F E+  +  G L +A Y+ AVA HP +V F T
Sbjct:   32 QKEFLRLAKTNTDNENTINRKQFHDALHIVKVEESDKELLDRLFTMFDDTGDGQINFKEFVCGISTILRGTLEEKLTFSFHMFDVDNSGKVSPEEMKSVLHSMNNTVSYFGDEKADESKIDTLVKEVFAEFDANHDGELSFAEYMHAVAAHPTLVSFVT 190          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S2WL49_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL49_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.080e-33
Identity = 67/157 (42.68%), Postives = 102/157 (64.97%), Query Frame = 1
Query:    7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGSLDYANYIKAVADHPVVVQFATGE 477
            +F ++A  +G   T+ R+E ++AL   GIME+D E+LD LFS  D   N +++++EF+   +P+  G + +KL FSFEL D   +G ++++DM  VL ++N TAS+FGDP L    +++LV  IF E G    +LDY  Y+ AV  HP++VQF TGE
Sbjct:   82 EFDDIAGLRGKRHTVNRSELQQALAACGIMETDKELLDILFSHMDHDCNGEVDFQEFVASCSPMISGDIAEKLHFSFELYDVSNSGTVRKEDMLTVLNAMNRTASWFGDPCLTAENIRDLVDHIFAEGGGE--ALDYTQYLDAVVSHPILVQFVTGE 236          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A835YSC2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC2_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.220e-33
Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 1
Query:   67 REALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGDRTGS----------------LDYANYIKAVADHPVVVQFATGEGTERY 492
            REALE  GI ++DTE+L RL ++ DKTG++++    F+ GLAPLC GSVE+KL F+ EL D  GTGR+   D+  VL +IND A+YFGDP +   ++ E+                              L YA ++  +ADHPVVV+FA G+GTER+
Sbjct:   12 REALEAAGIGDADTEMLLRLHTLADKTGDERVATAAFLSGLAPLCGGSVEEKLTFALELYDAAGTGRVSAQDLMAVLTAINDAAAYFGDPCVAADEIAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLPYAQHVGDIADHPVVVKFAAGQGTERF 169          
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Match: A0A7S3ZVE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVE1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 8.150e-33
Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 1
Query:    7 KFVELAQAQGNPFTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFELCDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYGD--RTGSLDYANYIKAVADHPVVVQFATGEGTERYGS 498
            K  ++A+ +G+   +T+ EF EAL  + I +SD +ILDR+F M D+TG D+IN++EFI G+ P   G  E+ +  +FEL  ++ + R+   D+  +L+++N  ASYFGDPV+  AQV ++V D   +     ++G L  A     VADH  V +F  G+GT RYG+
Sbjct:   35 KLADIAKREGSKDLVTKEEFGEALNGLEITQSDRDILDRIFVMLDRTGEDRINHKEFIVGIVPFALGKTEELIQMAFELFTNNASDRVTPMDLRFILMTLNTVASYFGDPVMTVAQVDKVVDDAADKLDPPPKSGELLMAELSPYVADHEFVHEFVEGKGTSRYGN 200          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1225.1865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UWF2_9STRA3.260e-6058.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FTB5_9STRA6.460e-5152.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U0XRU6_9STRA1.620e-4446.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3H521_9STRA9.700e-4445.56Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SV94_9ARCH2.740e-4345.61Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D7FQ54_ECTSI1.120e-4280.00Calcium-binding protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1C8Q8_9STRA1.740e-3843.40Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2WL49_9STRA1.080e-3342.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YSC2_9STRA1.220e-3343.04EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S3ZVE1_9STRA8.150e-3339.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1225contigL-elsbetiae_contig1225:7989..10522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue1.9e-23
Seed eggNOG ortholog112098.XP_008609716.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2EAJT@1,2SGTA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_007440.1
Exons3
Model size728
Cds size414
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1225.1865.1prot_L-elsbetiae_contig1225.1865.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1225 8082..10301 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815423.9473543-UTR-L-elsbetiae_contig1225:7988..80811622815423.9473543-UTR-L-elsbetiae_contig1225:7988..8081Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1225 7989..8081 +
1691682891.0334888-UTR-L-elsbetiae_contig1225:7988..80811691682891.0334888-UTR-L-elsbetiae_contig1225:7988..8081Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1225 7989..8081 +
1622815424.0008733-UTR-L-elsbetiae_contig1225:10301..105221622815424.0008733-UTR-L-elsbetiae_contig1225:10301..10522Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1225 10302..10522 +
1691682891.0843885-UTR-L-elsbetiae_contig1225:10301..105221691682891.0843885-UTR-L-elsbetiae_contig1225:10301..10522Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1225 10302..10522 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815423.9617934-CDS-L-elsbetiae_contig1225:8081..82171622815423.9617934-CDS-L-elsbetiae_contig1225:8081..8217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 8082..8217 +
1691682891.0570068-CDS-L-elsbetiae_contig1225:8081..82171691682891.0570068-CDS-L-elsbetiae_contig1225:8081..8217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 8082..8217 +
1622815423.9727297-CDS-L-elsbetiae_contig1225:8636..87671622815423.9727297-CDS-L-elsbetiae_contig1225:8636..8767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 8637..8767 +
1691682891.0675375-CDS-L-elsbetiae_contig1225:8636..87671691682891.0675375-CDS-L-elsbetiae_contig1225:8636..8767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 8637..8767 +
1622815423.9881263-CDS-L-elsbetiae_contig1225:10154..103011622815423.9881263-CDS-L-elsbetiae_contig1225:10154..10301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 10155..10301 +
1691682891.0758095-CDS-L-elsbetiae_contig1225:10154..103011691682891.0758095-CDS-L-elsbetiae_contig1225:10154..10301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1225 10155..10301 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1225.1865.1

>prot_L-elsbetiae_contig1225.1865.1 ID=prot_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MESDTEILDRLFSMFDKTGNDQINYREFIGGLAPLCHGSVEDKLAFSFEL
CDHDGTGRIKQDDMEQVLISINDTASYFGDPVLKRAQVKELVLDIFGEYG
DRTGSLDYANYIKAVADHPVVVQFATGEGTERYGSGN*
back to top

mRNA from alignment at L-elsbetiae_contig1225:7989..10522+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1225.1865.1 ID=mRNA_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2534bp|location=Sequence derived from alignment at L-elsbetiae_contig1225:7989..10522+ (Laminarionema elsbetiae ELsaHSoW15)
CAGCATAAATTCGTCGAGCTCGCTCAAGCGCAGGGAAACCCGTTCACGAT CACTCGTGCCGAGTTCAGGGAGGCGCTGGAGCTGGTGGGCATCATGGAAT CAGACACCGAGATCTTGGACCGCCTGTTCAGCATGTTCGACAAGACCGGC AACGACCAGATCAACTACAGGGAGTTCATCGGCGGCCTGGCGCCTCTCTG CCACGGGTCTGTCGAGGACAAGCTCGCCTGTGAGTAGCCCATGTAACACA TACAGTCTACGTATGTAGCTTGTGTTGGTCTGGAGCTAGTTGCGATGCGA TCGAGTAGGGATATTCGGGTGCAGTGTTCTGTCTGTACGCTTGGGGGCGT TCCGCTGCCACTGCCGCTGTTGCTCTGTGTTGTTCTGTTTCACGCCTCTG GTGCTCTGCAACTGCTGCTACATAGATACGTGCGGTGCTAAATATTGATT GTCCTATGCCGGTTCCGACCGGTCGTTATGCCTCGCTTCTCCCTCTTCTC ATTTTGTTGCTCTCGTCGTTCTCGTTTTTGTGGCTTTCTCTTCTCATTTG CCTCGTTCCCCTTCCTCTTCCGCGCGACGAACGACGAATGCGTGATGCAT GCATGCATGCATACATGCATACATAACATGCACACGTGTGTGTACCAGTC TCGTTCGAGCTCTGCGATCACGATGGCACAGGCAGGATCAAGCAAGACGA CATGGAGCAGGTGCTCATCTCCATCAACGATACCGCGAGCTACTTCGGAG ACCCGGTCCTGAAGCGCGCGCAGGTCAAGGTGAGAGAAAAAAGAGACCAA GAAGAAAGTGGCCCCAATATAAGGGAGGAGGGGGCACTGTAAAAGGCGGT GGGGTATGTAGGTAGGAAAAACAGGGCAAACTTACAAATTTTCGGGAGAC CTTTTTTTTTGGGGGGGGGGGGGGGGGCCCGGGGGGGGATGACTATTCGG GGTTTTGCTGCTTCAGCAGTCTTGTGGAGAGGGGGGGGTGGGGGGCGGGG GGGGTTGNNNNNNNNNNCGGAGAAAGGAGGGGGTGGGGGGGGGAGATGGG TGGGGGGGGGGGGGGGGGGGGCGCCCGGAGGGGGATGACTATTCAGGGTT TTGCTGCTTCAGCAGTCTTGTGGACAGGGTGAGATGGGGGCAGAGAGAGG TTGTACGCCATCTGCTGCTATGCCGGAACGGTATTGTGCGAGGGAAATGT AGGGAAGCGTGCACCCGTGCGCGTCGTTTTGCCCGAAGTCTTGGGGGGGG AGGGGGCGCGGGGTCGATAATCAGTGTTGCGGATGGATTGCCGTGGTTTG AACCTTGTTTCGGCGTTTGCGTTTTTTAGGTCGCCGTCTGTCTTAATCGG CGTTAGCGGAAGGATTGCCGTGGTCTGAAACCTTGTTTCCGCGTTTGCGT TTTCAGGTCGCCGTCTGTCTGGCCTTTGGCTTGTCGTTAGTTCCGGCCAA ACGATGCAAGTGTATGACAGCAGCATAGGCATTTGTGCATGTATTTGGTC CCGCAGTCCTCTTCTCTTCGTGTGTGCGTGTGTCTGGTTCGCAAGCCGGC GGCAGCAATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCACGTG GAACAACCACACATCTCGACTCGACTTTTCTGCAACGGTTCTCTTCCATG TACCATACAACTTACGGTAGATTTGCCGGTCTTACCGTGTGCTAGATGCC GTGCAAGCAAGAGTAGAACTCTTGGCTGTGCATACAGTTAGTAGTGCGCA ATTTGTGTGTGTTTTTATAAGTTTTCCTCGGCACCACACACATGCATGTA TTGACTATATGCAGATTAAGTTTTCCCTGGGTGCAGGGGCTGTGGGCTGA TGGTCAAGCCACGCACTAATGGAACCAGGCTTTTCAGGAGACGTTTCAGG CTGGCGACGCACGTGACGACGTACGCCAGTTCTGGCCCCTTAGTGCGACA CGGCAACTCACAGTACTGCGCGCAACTCGAACAGCAGTCAACACTTCTGT TCTCTTGCCTCACCCCGTGAATTATTCCGGTCATGAGCAACGTCTGAAAA AGGGGAACTTGTATGTATGTATAAACACGTAAACGCCTACTTGTATGTAT GTATGTGTAAACACGTAAACGCCTACTTGTATGTATGTATGTATAAACGC GTAAACGCCTACTCAGGAGCTGGTGCTGGACATCTTCGGCGAGTACGGCG ACCGCACCGGCTCCCTGGACTACGCCAACTACATCAAGGCCGTGGCGGAC CACCCCGTCGTCGTGCAGTTCGCTACCGGAGAAGGCACAGAGAGATACGG CTCCGGGAACTAACTACTATAGCCTGGTGTCTTGATGTACTCGGCTTGCT CTCCTCTCCGAGGCCTGAGGGCTGCCGCTGCCGCTGCTGCTGCTGCTGCT GGCTGGCTGCGTTGGGCCGAATCAGTCCGCCGTGTGCCTGCAACCCCAGT CTTTCCTCCGCTTCCCCCGCTCTCCTCCAAAGCGCCTCTCTCTCTCTTTG TTGGTGCTCTTCTCGACCGTAGCCTCGTTCGTTC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1225:7989..10522+

>mRNA_L-elsbetiae_contig1225.1865.1 ID=mRNA_L-elsbetiae_contig1225.1865.1|Name=mRNA_L-elsbetiae_contig1225.1865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig1225:7989..10522+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAATCAGACACCGAGATCTTGGACCGCCTGTTCAGCATGTTCGACAA
GACCGGCAACGACCAGATCAACTACAGGGAGTTCATCGGCGGCCTGGCGC
CTCTCTGCCACGGGTCTGTCGAGGACAAGCTCGCCTATGGAATCAGACAC
CGAGATCTTGGACCGCCTGTTCAGCATGTTCGACAAGACCGGCAACGACC
AGATCAACTACAGGGAGTTCATCGGCGGCCTGGCGCCTCTCTGCCACGGG
TCTGTCGAGGACAAGCTCGCCTTCTCGTTCGAGCTCTGCGATCACGATGG
CACAGGCAGGATCAAGCAAGACGACATGGAGCAGGTGCTCATCTCCATCA
ACGATACCGCGAGCTACTTCGGAGACCCGGTCCTGAAGCGCGCGCAGGTC
AAGTCTCGTTCGAGCTCTGCGATCACGATGGCACAGGCAGGATCAAGCAA
GACGACATGGAGCAGGTGCTCATCTCCATCAACGATACCGCGAGCTACTT
CGGAGACCCGGTCCTGAAGCGCGCGCAGGTCAAGGAGCTGGTGCTGGACA
TCTTCGGCGAGTACGGCGACCGCACCGGCTCCCTGGACTACGCCAACTAC
ATCAAGGCCGTGGCGGACCACCCCGTCGTCGTGCAGTTCGCTACCGGAGA
AGGCACAGAGAGATACGGCTCCGGGAACTAAGAGCTGGTGCTGGACATCT
TCGGCGAGTACGGCGACCGCACCGGCTCCCTGGACTACGCCAACTACATC
AAGGCCGTGGCGGACCACCCCGTCGTCGTGCAGTTCGCTACCGGAGAAGG
CACAGAGAGATACGGCTCCGGGAACTAA
back to top