mRNA_L-elsbetiae_contig12249.1864.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: D8LDG1_ECTSI (Dihydrodipicolinate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 6.870e-21 Identity = 57/95 (60.00%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGI-----TCAGDE*RMHAEGTAD 340 I ES Q AK DTSG AKA+AADFA T EDY V+ KVRD EGQLAFGVPEE+L GHAFHT + SND T C M+AEGTAD Sbjct: 213 ITESHQSAKVDTSGTAKALAADFAKLTAEDYDVKSINKVRDTEGQLAFGVPEEHLAGHAFHTYSLKSNDGTVEFQFRHNVCGR---LMYAEGTAD 304
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A7S2RNZ9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNZ9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.210e-13 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 68 HIKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGDE*--RMHAEGTAD 340 H+KES Q KADTSG AKAI + +D+ VE + +RD E +AFGVPEE++ GHAFHT T S D + + ++AEGTAD Sbjct: 190 HVKESHQKTKADTSGTAKAIVESLTELSDDDFSVEDIEMIRDEEESMAFGVPEESMNGHAFHTYTFTSPDSSVQFQLQHNVVGRTVYAEGTAD 282
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A7S3XN34_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN34_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 7.970e-13 Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGDE*--RMHAEGTAD 340 I ES Q KADTSG AKAIA A + +E +RD EGQ AFGVPEE L GHA+HT +S D T + R++AEGTAD Sbjct: 164 IDESHQSTKADTSGTAKAIAGSLATLNGAPFDLEDINMIRDAEGQRAFGVPEEYLKGHAYHTYALVSPDGTTEFQFRHNVNGRRVYAEGTAD 255
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A7R9W9Z2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9Z2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.040e-12 Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 68 HIKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGDE*--RMHAEGTADG 343 +++ES Q KADTSG AKA+ A + +D+ V+ +K+RD E +AFGVPEE L GHAFHT T S D + + ++AEGTADG Sbjct: 212 NVRESHQKTKADTSGTAKAVVASLKNLSDDDFEVKDIEKIRDNEESMAFGVPEEGLNGHAFHTYTFTSPDGSVEFQLKHNVVGRTVYAEGTADG 305
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A7S4HHP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HHP4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.650e-10 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 68 HIKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGDE*--RMHAEGTADG 343 +++ES Q KADTSG AKA+ A +D+ ++ +K+RD + + FGVPEE L GHAFHT T S D + + ++AEGTADG Sbjct: 228 NVRESHQKTKADTSGTAKAVVASLNELGDDDFELKDIEKIRDDDESMKFGVPEEGLNGHAFHTYTFTSPDGSVEFQLQHNVVGRTVYAEGTADG 321
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A0D2JWJ0_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JWJ0_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 3.170e-10 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGD--E*RMHAEGTAD 340 + ES Q KAD SG AKA+ A VE + +K+RD EGQL GVPE++L GHAFHT T S D + + E ++AEGT D Sbjct: 188 VTESHQRNKADVSGTAKAVVASLRQMGVEGFKDSDIRKIRDREGQLQMGVPEDHLGGHAFHTYTLTSPDGSVQFKFKHNVVERSIYAEGTVD 279
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A6U3NYN1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NYN1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.270e-9 Identity = 42/94 (44.68%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGI----TCAGDE*RMHAEGTAD 340 +KES Q KADTSG AKA+ + + V+ + VRD E +AFGVPE+ L GHAFHT T S D + AG ++AEGTAD Sbjct: 213 VKESHQKTKADTSGTAKAVVESLEQLSTCGFTVDDIELVRDDEESIAFGVPEDALNGHAFHTYTLTSADGSVEFQLKHNVAGRS--VYAEGTAD 304
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A813FPG7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FPG7_POLGL) HSP 1 Score: 63.2 bits (152), Expect = 4.850e-9 Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVEGQLAFGVPEENLFGHAFHTCTPISND 277 + ES Q KADTSG AKA+ + F V+ + ++ K +RD E Q AFGV EE+L GHA+HT T S D Sbjct: 164 VTESHQKTKADTSGTAKALVSSFQKMGVDKFEMDDIKMLRDDESQKAFGVSEEHLNGHAWHTYTLKSGD 232
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: A0A7S2KRY9_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRY9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.600e-8 Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFT-KKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGDE*--RMHAEGTAD 340 + ES Q KADTSG AKA+ + +D+ +E K +RD E LAFGVPE+ + GHAFHT T S D + + ++AEGTAD Sbjct: 218 VTESHQKTKADTSGTAKAVIGSLKTLSDDDFDLEEDIKMLRDDESSLAFGVPEDAMNGHAFHTYTLTSPDGSVQFQLQHNVSGRTVYAEGTAD 310
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Match: K0RG42_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG42_THAOC) HSP 1 Score: 60.8 bits (146), Expect = 4.160e-8 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 71 IKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFT-KKVRDVEGQLAFGVPEENLFGHAFHTCTPISNDRTPGITCAGD-E*R-MHAEGTAD 340 + ES Q KADTSG AKA+ + +D+ +E + +RD E LAFGV E+ L GHAFHT T S D++ + E R ++AEGTAD Sbjct: 226 VTESHQKTKADTSGTAKAVIDSLKTLSDDDFNIEKDIEMLRDDESSLAFGVSEDALNGHAFHTYTLTSPDKSVQFELKHNVEGRTVYAEGTAD 318 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12249.1864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12249.1864.1 >prot_L-elsbetiae_contig12249.1864.1 ID=prot_L-elsbetiae_contig12249.1864.1|Name=mRNA_L-elsbetiae_contig12249.1864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp MDASSIEHIKESRQFAKADTSGIAKAIAADFAAPTVEDYGVEFTKKVRDVback to top mRNA from alignment at L-elsbetiae_contig12249:759..2793+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12249.1864.1 ID=mRNA_L-elsbetiae_contig12249.1864.1|Name=mRNA_L-elsbetiae_contig12249.1864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2035bp|location=Sequence derived from alignment at L-elsbetiae_contig12249:759..2793+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12249:759..2793+ >mRNA_L-elsbetiae_contig12249.1864.1 ID=mRNA_L-elsbetiae_contig12249.1864.1|Name=mRNA_L-elsbetiae_contig12249.1864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig12249:759..2793+ (Laminarionema elsbetiae ELsaHSoW15)back to top |