mRNA_L-elsbetiae_contig12236.1856.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: D8LJJ8_ECTSI (Protein phosphatase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ8_ECTSI) HSP 1 Score: 198 bits (504), Expect = 9.940e-61 Identity = 96/117 (82.05%), Postives = 104/117 (88.89%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDEDMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILDM 357 V AT DHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD+ + EECKVSPAPET+S RS DEFL+VACDGIWDV+S+EDC QAVREIF EGE+ +GLACEEILDM Sbjct: 159 VAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDALPPEECKVSPAPETRSFPRSPQDEFLVVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDM 275
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A6H5KCZ0_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ0_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.610e-45 Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDEDMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNE 276 V AT DHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD+D+ EECKVSPAPET+S RS DEFLIVACDGIWDV+S+E Sbjct: 123 VAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDE 212
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A835ZAX4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX4_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.760e-43 Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDEDMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILD 354 V AATEDHKPY+ E+ARIE AGG VSM+RVDGDLAVSRALGDFQYK D+ CKV+ P+T R+ GDE L++ CDG+WDV++N+DC + EIFA+GE +GLACEE++D Sbjct: 196 VAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELID 311
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.240e-42 Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 4 QVVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDE-DMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILDMVRPK 369 QV A +EDHKP ER RIE AGG VSM+RVDGDLAV+RALGDFQYKD D+ V+ KV+ P+ ++ RS GDE L++ACDGIWDV+SN+DC VR+I+ EGE D GL CEE+LD K Sbjct: 156 QVRALSEDHKPDGAIERERIESAGGCVSMRRVDGDLAVARALGDFQYKDRPDLPVDRQKVTCVPDVRTTPRSSGDEVLVLACDGIWDVMSNQDCCDCVRQIYQEGETDSGLVCEELLDTCLTK 278
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A7S2PS74_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS74_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.620e-36 Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDE-DMKVEECKVSPAPETQSIERS-DGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILD 354 V + DHKP + E +RI++AGG VSM+RVDGDLAVSRALGDFQYKD D+ EE KV+ P+ R + DEF++VACDGIWDV+SN++C V++I EGE D+GL CEE+LD Sbjct: 165 AVPLSFDHKPNDAEEHSRIDRAGGYVSMRRVDGDLAVSRALGDFQYKDRADLPAEEQKVTAKPDLIVYPRDPEKDEFMVVACDGIWDVVSNDECVNMVQKILDEGETDMGLVCEEVLD 282
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A485LRV3_9STRA (Aste57867_24961 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRV3_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.340e-36 Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDE-DMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILD 354 VV + DHKP N GER RIE AGG V RV+GDLAVSRALGDF YK D++ EE +VS P+ + RS +EFL++ACDGIWDV+SNED VR + A+GEN++GL CEE+LD Sbjct: 151 VVPMSYDHKPNNPGERQRIENAGGAVRNNRVNGDLAVSRALGDFVYKQRGDLRPEEQQVSAEPDVKIEARSKDNEFLLLACDGIWDVMSNEDACAYVRGLMAQGENNMGLICEEVLD 267
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: W4H0A2_9STRA (PPM-type phosphatase domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0A2_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.770e-36 Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDE-DMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILD 354 VV + DHKP N GER RIE AGG V RV+GDLAVSRALGDF YK D++ E+ +VS P+ +++ER+ EFL++ACDG+WDV+SNED VR + A GE+++GL CEE+LD Sbjct: 151 VVPMSYDHKPNNPGERQRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRPDLRAEDQQVSAEPDVKAVERTKDFEFLLLACDGVWDVMSNEDACAFVRSLLAHGESNMGLICEEVLD 267
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A7R9ZR42_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZR42_9STRA) HSP 1 Score: 131 bits (329), Expect = 7.350e-36 Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYK-DEDMKVEECKVSPAPETQSIERS-DGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILDM 357 V + DHKP N E RIEKAGG V KRVDGDLAVSR LGDF YK +E M VEE KV P PE R+ DEF+++ACDG+WDV++NE+C+ ++++ EGE DLG+ CEE++D+ Sbjct: 17 TVPLSFDHKPVNVTELLRIEKAGGFVKSKRVDGDLAVSRGLGDFTYKSNESMTVEEQKVIPQPEIICYPRNRKTDEFVVLACDGVWDVMTNEECSAMIQDLLDEGETDLGMTCEEMMDL 135
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A024UCH5_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCH5_9STRA) HSP 1 Score: 131 bits (330), Expect = 7.160e-35 Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 7 VVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDE-DMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEILD 354 V+ + DHKP N GER RIE AGG V RV+GDLAVSRALGDF YK D+ +VS P+ + ER+ DEFL++ACDGIWDV+SNED VR + A+GE+++GL CEE+LD Sbjct: 151 VIPMSYDHKPNNTGERQRIENAGGSVRNNRVNGDLAVSRALGDFIYKQRPDLPAAAQQVSAEPDVKVAERTKEDEFLLLACDGIWDVMSNEDAVALVRSLMAQGESNMGLICEEVLD 267
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Match: A0A7S2B8Y2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8Y2_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.050e-34 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 1 Query: 4 QVVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDEDMKVEECKVSPAPETQSIERSDGDEFLIVACDGIWDVISNEDCAQAVREIFAEGENDLGLACEEIL 351 + VA +EDHKPYN E+ RIE AGG VSMKRVDG+LAVSRALGDFQ+KD ++ ++ KV+ P+ ++RS+ DEF+I+ACDGIWDV++NE + + +GE L CEE++ Sbjct: 157 ETVALSEDHKPYNAEEKNRIEAAGGCVSMKRVDGELAVSRALGDFQFKDANLDAKDTKVTAFPDITIVQRSEADEFVILACDGIWDVMTNEQATKQMTSYCEQGEASPRLMCEEMM 272 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12236.1856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12236.1856.1 >prot_L-elsbetiae_contig12236.1856.1 ID=prot_L-elsbetiae_contig12236.1856.1|Name=mRNA_L-elsbetiae_contig12236.1856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp RQVVAATEDHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDback to top mRNA from alignment at L-elsbetiae_contig12236:291..4955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12236.1856.1 ID=mRNA_L-elsbetiae_contig12236.1856.1|Name=mRNA_L-elsbetiae_contig12236.1856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4665bp|location=Sequence derived from alignment at L-elsbetiae_contig12236:291..4955- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12236:291..4955- >mRNA_L-elsbetiae_contig12236.1856.1 ID=mRNA_L-elsbetiae_contig12236.1856.1|Name=mRNA_L-elsbetiae_contig12236.1856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig12236:291..4955- (Laminarionema elsbetiae ELsaHSoW15)back to top |