mRNA_L-elsbetiae_contig12214.1844.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A6H5KMN8_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN8_9PHAE) HSP 1 Score: 234 bits (596), Expect = 8.070e-73 Identity = 114/156 (73.08%), Postives = 122/156 (78.21%), Query Frame = 2 Query: 2 FVHGDPVPLHYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEACVLEALGLRGGAAE 469 FVHG+ VPLHYYMRPGAA+LVAA+ HPR RLAFYTSMRGVNALPAARFL+P PEVYDRPFNARDPHGAN WDTTRDLPL+WSTPGR GAGFGP +T++VDDTPRKMRFMDAGLV VPEFTEAC LEALG G E Sbjct: 190 FVHGENVPLHYYMRPGAAELVAALEAHPRARLAFYTSMRGVNALPAARFLMPDDSSA--------------APEVYDRPFNARDPHGANAWDTTRDLPLIWSTPGRTGAGFGPGNTIMVDDTPRKMRFMDAGLVVVPEFTEACALEALGGETGGVE 331
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A7S2CI38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI38_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.230e-25 Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 26 LHYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDP-HGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEF 418 L+YY R G LV+ + HPRV LAFYTSMR NALPA + G E+YDR FN +D GA WDT RD+ +W+T GRAG GF +TV+VDD+ RKMR LV +PEF Sbjct: 194 LNYYFRAGVCDLVSMLLDHPRVVLAFYTSMRESNALPAVLQISGGRKRV----------------EIYDRDFNKKDEWDGAKDWDTVRDMHKIWTTKGRAGYGFNARNTVMVDDSSRKMRQFPGNLVLIPEF 309
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A835ZD02_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD02_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.010e-24 Identity = 73/147 (49.66%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 17 PVPLHYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAA----------RFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEA 427 P+ LHYY+RP A +LV + H RV LAFYTSMR NALPA R L XXXXXXXXXX +Y R +NA DP GA+PW T RDL VW+ G+ G GFG A+T+V+DD+ KMR M ++ V E+TEA Sbjct: 53 PMRLHYYLRPHAMELVRFLRGHARVTLAFYTSMRLENALPAVEGDDSGNGNGRQLSDTDHASSNSXXXXXXXXXXLEALIYAREYNAPDPLGAHPWSTKRDLARVWTARGKPGHGFGAANTLVIDDSAAKMRHMPHNVLAVEEYTEA 199
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A7S3K1S4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1S4_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.260e-24 Identity = 57/137 (41.61%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 29 HYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEACVLE 439 +YY+R A Q + HP + AFYTSMR +A PA R L P +Y+R FN DP N WDT RDL +WSTP R GF P +T+V+DDTPRKMR ++ VP FTE V + Sbjct: 175 YYYIRENAIQFCQQLESHPAIIYAFYTSMRERSAKPATRILAPHA-------------------HLYERVFNKPDPFAENSWDTMRDLEKLWSTPNRPAYGFNPTNTLVIDDTPRKMREHPHNVIVVPTFTEKAVAQ 292
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A7S2RHV1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHV1_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.210e-23 Identity = 60/133 (45.11%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 26 LHYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDP--HGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEF 418 L+Y++R G QLV + HPR R+AFYTSMR NALPA + + G ++YDR FN D GA WDT RDL VWST + G GF +TV+VDDTPRKMR V VPE Sbjct: 252 LNYFIRRGTKQLVRTLLAHPRARVAFYTSMRESNALPAVKRITDGVRV-----------------DIYDREFNVADRGHDGAKHWDTMRDLERVWSTVDKVGNGFSWHNTVMVDDTPRKMRHSPQNAVFVPEL 367
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A7S1XU20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU20_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.310e-22 Identity = 58/150 (38.67%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 29 HYYMRPGAAQLVAAMHRH------------------PRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTE 424 +YYMRP A +L+ + R PRV++ FYTSM+ NA PA L +Y R FN DP G N WDT RDL VW+ G+ G GF A+T++VDDTPRKMR M VPEF E Sbjct: 57 YYYMRPFAEELIGLLLRAEKGILSAAGEAPAPHPNAPRVQMGFYTSMQQSNAAPAVATLTGESAAQAKR-------------RIYPRAFNVADPQGKNSWDTHRDLAGVWAAQGKVGFGFSEANTIMVDDTPRKMRHMPRNAFFVPEFNE 193
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: F0XVF5_AURAN (FCP1 homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF5_AURAN) HSP 1 Score: 99.0 bits (245), Expect = 8.070e-22 Identity = 61/143 (42.66%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 29 HYYMRPGAAQLV-----AAMHRHP---RVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEACV 433 HYY R A LV AA P RV AFYTSMR NA P AR+L G ++Y+R FN D G N WDT RDLP VW TP +A GF +T+V+DDT RKMR + ++ VP + EA V Sbjct: 175 HYYARDHAEDLVQFLCDAATPSDPARRRVVFAFYTSMREANAQPIARYLTRGKRA-----------------DMYERKFNKDDASGENAWDTMRDLPKVWGTPAKAAHGFDETNTLVIDDTHRKMREYPSNVLVVPTYDEATV 300
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: D7G8V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 2.170e-21 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 2 FVHGDPVPLHYYMRPGAAQLVAAMHRHPRVRLAFYTSMRGVNALPAARFLLPG 160 FVHG+ VPLHYYMRPGAA+LVAA+ HPR RLAFYTSMRGVNALPAARFL+PG Sbjct: 185 FVHGENVPLHYYMRPGAAELVAALEAHPRTRLAFYTSMRGVNALPAARFLMPG 237
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A8J2WY59_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY59_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.520e-18 Identity = 60/144 (41.67%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 32 YYMRPGAAQLVAAM--------HRHPRVRLAFYTSMRGVNALPAARFLLPGXXXXXXXXXXXXXXXXXXVPEVYDRPFNARDPHGANPWDTTRDLPLVWST--PGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEACV 433 YY RPGA L+ + RV AFYTSMR NA P A +L G ++Y+R FN DP GAN +DT RDLP VWS+ PG A GF +TVV+DDT RKMR + ++ VP F E V Sbjct: 308 YYARPGAKDLIQFLLHAARTTEEGRRRVVFAFYTSMREANARPIADYLTGGRRV-----------------DIYERKFNKADPTGANDYDTMRDLPSVWSSVKPGSA-RGFTAENTVVIDDTLRKMRELPHNVLVVPPFEEDAV 433
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Match: A0A7S2D3W3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3W3_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.880e-16 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 224 VYDRPFNARDPHGANPWDTTRDLPLVWSTPGRAGAGFGPADTVVVDDTPRKMRFMDAGLVTVPEFTEA 427 +YDR +NA D G WDT RD+ +WSTPG+ G GF +T+++DDT RKMR ++ VPEF EA Sbjct: 27 IYDRDYNAEDKSGTKSWDTMRDMHRIWSTPGKIGYGFDAGNTIMIDDTMRKMRNFPDNVIVVPEFKEA 94 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12214.1844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12214.1844.1 >prot_L-elsbetiae_contig12214.1844.1 ID=prot_L-elsbetiae_contig12214.1844.1|Name=mRNA_L-elsbetiae_contig12214.1844.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp IRARRPRPPPLLHAARSRPARGGDAPPPAGPAGVLHVHARRQRPAGGAFSback to top mRNA from alignment at L-elsbetiae_contig12214:2011..4046+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12214.1844.1 ID=mRNA_L-elsbetiae_contig12214.1844.1|Name=mRNA_L-elsbetiae_contig12214.1844.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2036bp|location=Sequence derived from alignment at L-elsbetiae_contig12214:2011..4046+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12214:2011..4046+ >mRNA_L-elsbetiae_contig12214.1844.1 ID=mRNA_L-elsbetiae_contig12214.1844.1|Name=mRNA_L-elsbetiae_contig12214.1844.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig12214:2011..4046+ (Laminarionema elsbetiae ELsaHSoW15)back to top |