mRNA_L-elsbetiae_contig12199.1828.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE) HSP 1 Score: 198 bits (504), Expect = 2.780e-59 Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDDPD GV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE E DQT RP+ GE L++G +N RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ + C+ G++WGN+F+ C+DI + Sbjct: 209 IEYFLCDTADMDDPD-GVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 202 bits (513), Expect = 5.000e-59 Identity = 87/160 (54.37%), Postives = 119/160 (74.38%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDDPD+ V Q C N YPL+R + D +NSP+DPDYPGR++++P CRG+N E DQ+ RPV GG+S L++G +N RY LP+I C+HC+L M+Y++ GC PGY EF P WP ECAP+KEDW+ + C+ G++WGN+F+ C+DI + Sbjct: 188 IEYFLCDTADMDDPDD-VVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 345
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.860e-58 Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDDPD GV Q C N +PL+R + D +NSP+D +YPGR++++P CRG N E DQ+ RPV GG L+ G +N+ RY LP+I CEHC+L M+Y++ GC PGY EF+P WP +CAP+KEDW+ + C GR+WGN+F+ C+DI + Sbjct: 111 IEYFLCDTADMDDPD-GVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITL 268
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI) HSP 1 Score: 196 bits (498), Expect = 4.730e-58 Identity = 86/160 (53.75%), Postives = 117/160 (73.12%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RP-VFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDD D GV Q C NKYPL+R + D +NSP+DP+YPGR++++P CRGEN E DQ+ RP + GG L+ G +N+ RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ + C+ G++WGN+F+ C+DI + Sbjct: 70 IEYFLCDTADMDDAD-GVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 227
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 201 bits (510), Expect = 4.750e-57 Identity = 88/160 (55.00%), Postives = 117/160 (73.12%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDDPD GV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGEN E DQT RP+ GE L++G +N RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ + C+ G++WGN+F+ C+DI + Sbjct: 167 IEYFLCDTADMDDPD-GVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 324
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 187 bits (474), Expect = 1.170e-54 Identity = 85/160 (53.12%), Postives = 109/160 (68.12%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +E+F+C+ + DPD G+P Q CFN+YPL RA+ D NSP+DP++PGRYY DP CRG+ EVDQT+P+ GE++ MRY LPDI C HCIL M YH+G C GY+EFNPPSWPS CAPNKEDW++ + C Q G + FW C+D +I Sbjct: 154 LEFFICNADN--DPD-GIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGY-YPEEFWACSDFSI 302
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.860e-53 Identity = 83/162 (51.23%), Postives = 106/162 (65.43%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAIKS 481 +E+F+C+ D+ NG+P Q CFN+YPL RA+ D +NSP+DPD+PGRYY DP CRGE EVDQT+PV GE++ MRY LPDI C HCIL M YH+G C GYD+F+PPSWP +CA KE W+ + C Q G + FW C+D +I S Sbjct: 155 LEFFICNA---DNDPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQEGY-YPEEFWACSDFSITS 305
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.650e-53 Identity = 87/184 (47.28%), Postives = 115/184 (62.50%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTV--------------------------NHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 +EYFLCDT DMDDPD GV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE E DQ+ G S+LNDG V N RY LP+I CEHC+L M+Y++ GC PGY EF+P WP +CAPNKE+W+ + C+ G++WGN+F+ C+DI + Sbjct: 174 IEYFLCDTADMDDPD-GVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQS-----GRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITL 350
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.130e-52 Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 5 EYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAIKS 481 E+F+C+T DMDDPD GVP Q CFN +PL RADDD SP+DP+YPGRYY+DP CR E E +Q+ G ++ MRY LPDI CEHCIL M Y++G CK GY+EFNP SWPS CAPNK DWIE+ + C G ++ FW C+D ++ S Sbjct: 157 EFFVCNTDDMDDPD-GVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREE--ETEQSSNSIEGYNIK-------MRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRG-QYPEEFWACSDFSMTS 304
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 179 bits (453), Expect = 5.210e-52 Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 2 VEYFLCDTQDMDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPD-ITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWIEVSSHKCNQPGREWGNMFWNCADIAI 475 VE+F+C+ +M+DPD G+ Q CFN YPL RA+ D NSP+DP+YPGRYY+DP CR E DQT+P DG V H Y+LP+ +TC+ CIL M Y++G CK GY+EF P SWPS CAP K DWIE+ + C + G + FW CAD AI Sbjct: 127 VEFFICNADEMEDPD-GIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKP-----EGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENG-SYPEEFWACADFAI 276 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12199.1828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12199.1828.1 >prot_L-elsbetiae_contig12199.1828.1 ID=prot_L-elsbetiae_contig12199.1828.1|Name=mRNA_L-elsbetiae_contig12199.1828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp MDDPDNGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNback to top mRNA from alignment at L-elsbetiae_contig12199:4367..5476+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12199.1828.1 ID=mRNA_L-elsbetiae_contig12199.1828.1|Name=mRNA_L-elsbetiae_contig12199.1828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig12199:4367..5476+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12199:4367..5476+ >mRNA_L-elsbetiae_contig12199.1828.1 ID=mRNA_L-elsbetiae_contig12199.1828.1|Name=mRNA_L-elsbetiae_contig12199.1828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig12199:4367..5476+ (Laminarionema elsbetiae ELsaHSoW15)back to top |