mRNA_L-elsbetiae_contig1219.1821.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1219.1821.1
Unique NamemRNA_L-elsbetiae_contig1219.1821.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: D7FM34_ECTSI (SHNi-TPR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM34_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 5.840e-165
Identity = 366/517 (70.79%), Postives = 386/517 (74.66%), Query Frame = 1
Query:    1 NTVAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAP--------PAAGDAACPGKENGSSDAA-ASNGSAESVSKGTXXXXXXXKGEEEGGATKKPPPAMSAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGSTTVGFGDPSPPSAFSGXXXXXXXXX------------------AGEVTTVGFGAPSGAAAAAATVATGFGGASAXXXXXXXXXXXAPPGVRGGTAANVMVVKRKGRPAPKAGGASGPP---PAKEEGATA--SPKKAKASNE 1455
            + VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSG+E+SP+LAPLYYEYGNSLLYNAEESG +FG AITDAE+KKRAMAIVEA+INGQAA  XXXXXXXXXXXXXX     XXXXXXXXXXX        +PDQEAEEDLE+AWENLEMARRIY  LELTE+IRTAI+KVHLRLGDLNMVNGMYNEAADEF+KCL HR ALPCRQSRGVADAHVRRAQALFYASTLEGA+K    DALV QSLEQYRLA+G+FDAMLASLKEAP        P+A DAA PGKEN  SDA   SNGS        XXX          GA   PP A SAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSG G+TTVGFG+PSP SAFSGXXXXXXXXX                  AGEVTTVGFGA               G    XXXXXXXXXXX          ANVMVVKRKGRPAPK   A+  P   P    GA A  SPKKAK + E
Sbjct:    8 SAVAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGDEMSPSLAPLYYEYGNSLLYNAEESGAVFGDAITDAEQKKRAMAIVEAQINGQAAXXXXXXXXXXXXXXXXGEGATXXXXXXXXXXXAP------SPDQEAEEDLELAWENLEMARRIYGGLELTEDIRTAIAKVHLRLGDLNMVNGMYNEAADEFEKCLDHRLALPCRQSRGVADAHVRRAQALFYASTLEGAEK----DALVGQSLEQYRLAMGVFDAMLASLKEAPEVTAAAADPSA-DAASPGKEN--SDAPNTSNGSXXXXXXXXXXXGAQ-------GAASPPPSAASAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGTGTTTVGFGNPSPASAFSGXXXXXXXXXXXXXXXXXXXGGVAATPAAGEVTTVGFGAQQS------------GXXXXXXXXXXXXXXXXXXXXXXXXXANVMVVKRKGRPAPKPAPAATAPMTAPVAGVGAEAIVSPKKAKPNKE 492          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A7S2DN85_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN85_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.570e-27
Identity = 117/406 (28.82%), Postives = 181/406 (44.58%), Query Frame = 1
Query:    7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTE-EIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAPPAAGDAACPGKENGSSDAAASNGSAESVSKGTXXXXXXXKGEEEGGATKKPPPAMSAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGS---TTVGFGDPSPPSAFSGXXXXXXXXXAGEVTTVGFGAPS 1212
            +A    D  +  GR+ ++DG  ++A+  F  LL++ ++  S  ELS A  P+Y +YGN+LL  AEES ++FG ++     +    A   A  +G++                                             +A ED EIAWE LE+AR I+ +   +  E+   + KVHLRLGDL  +NG + +AA ++++CL  R+ +     R +AD H   AQ   Y +     D A + D L +QS+  Y+  + IF A+LA  + +P            NG       NG      KGT         ++E  A++     ++ I E  D+   ++ETID +  G  ++ L   +S AG    TT GFG P+ P A               V T+GFG PS
Sbjct:    4 LAEITEDSTFIRGRQFLNDGDCDDAIELFEKLLQSVIE--SSGELSLAAGPIYMQYGNALLMKAEESSQVFGESVETKPAESGEQATGLAVDSGESEETEDLPAAGKDPSAKYPEQQQQQA-------------------SDAVEDTEIAWEVLEVARGIFEKHRTSNPEVIEWLGKVHLRLGDLQKLNGNFVDAARDYERCLELRNRIIPANDRRIADVHYSLAQVHEYCAAEP--DHADRADDLTQQSMTHYKSCLNIFAAILAERESSP------------NG-------NG------KGTAGVC-----DQEQTASQ-----LADIAEYRDILVELQETIDALEQGSRLKVLEMKQSVAGPQGVTTNGFGAPATPGA--------------GVETIGFGRPS 337          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A4D9D061_9STRA (SHNi-TPR domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D061_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.640e-21
Identity = 123/411 (29.93%), Postives = 190/411 (46.23%), Query Frame = 1
Query:    7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEK------KRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP---------------DQEAEEDLEIAWENLEMARRIYSELE-LTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAPPAAGDAACPGKENGSSDAAASNGSAESVSKGTXXXXXXXKGEEEG-GATKKPPPAMSA-----IEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGS-TTVGFGDP-----SPPSA 1137
            +AA L DP+YK G  L   G+ +EA+ F    +       S +++S A AP+Y+ YG++LL  AEES ++FG A+T A+EK               +  G  + A XXXXXXXXXXXXX                        T                 ++ ++DLE+AWENLE +R IY + E + + ++  + +V+LRLGDL   NG + +A D++ + L     +    SR +AD H + A    YAS  E      +   L  ++LE Y     +F+ ++   ++A   AG     G+E+GSS                       +G +EG  A K PPP   +     ++E E++   +RETI+   + +++ A        G  TT+GFG P      PP+A
Sbjct:   26 LAAVLEDPRYKQGVALCKRGQFDEALEFLGSCVALAA---SEDDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEXXXXXXXXCEGQGSTSDAAXXXXXXXXXXXXXGVAMAGGASCKKAAATVSSKAIGETAYEDGDSGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPLK--LGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYGKVCDEDSRVIADLHYQLAMMYIYASVEE-----EQAVTLKSKALEHYIQCARVFEILVEKARKAAATAGKLG-DGEEDGSS--------------------FPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEA--TRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAA 403          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: G4YES5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YES5_PHYSP)

HSP 1 Score: 100 bits (249), Expect = 1.840e-18
Identity = 76/257 (29.57%), Postives = 113/257 (43.97%), Query Frame = 1
Query:   16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            TL DP+Y  G  L+ D RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+             E   NG                                              +EA +DLE AWE +E+AR IYS     + + T +++V+ RLGDL + +  + +A  +F+K L  R     A     +  +AD + + A A  Y  +    +K  +K+A+  + L  Y +A
Sbjct:  269 TLTDPRYLRGVALLKDKRLEEAVVAFEDLLRTMCEA-EGKADSLAVAPVYYEYGHALLSLTEATASLFGGAV-------------EGAANGGGDDGEQDA-------------------------------------REAADDLEAAWEVMELARVIYSRFPGDKAVETQLARVYTRLGDLGLESDQFEQAKSDFEKALLLRRKLLKATKAEDTTQLADLYCQLAIACIYRDSSADKEKEGEKEAVPNEELSHYVMA 474          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: D0MS55_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MS55_PHYIT)

HSP 1 Score: 95.1 bits (235), Expect = 7.820e-17
Identity = 75/257 (29.18%), Postives = 113/257 (43.97%), Query Frame = 1
Query:   16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            TL DP+Y  G  L+ + RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+  A          +AK                                                  EA +DLE AWE +E+AR IYS     + + T +++V+ RLGDL + +  + +A  +F+K L  R     A     +  +AD + + A A  Y  +   ADK ++ + +  + L  Y +A
Sbjct:  296 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKVDFEKALLLRRKLLKATKADDTTQLADLYCQLAIACIYRDST--ADKDKEVEVVPNEELTHYVMA 499          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: W2LI98_PHYPR (SHNi-TPR domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2LI98_PHYPR)

HSP 1 Score: 93.2 bits (230), Expect = 9.180e-17
Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 1
Query:   16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            TL DP+Y  G  L+ + RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+  A          +AK                                                  EA +DLE AWE +E+AR IYS     + + T +++V+ RLGDL + +  + +A  +F+K L  R     A     +  +AD + + A A  Y  +    DK    + +  + L  Y +A
Sbjct:   12 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEVTASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRKLLKATQAEDTTQLADLYCQLAIACIYRDSTADKDK----EVVPNEELTHYVMA 213          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: W2H613_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2H613_PHYPR)

HSP 1 Score: 93.6 bits (231), Expect = 2.850e-16
Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 1
Query:   16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            TL DP+Y  G  L+ + RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+  A          +AK                                                  EA +DLE AWE +E+AR IYS     + + T +++V+ RLGDL + +  + +A  +F+K L  R     A     +  +AD + + A A  Y  +    DK    + +  + L  Y +A
Sbjct:  269 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRKLLKATQAEDTTQLADLYCQLAIACIYRDSTADKDK----EVVPNEELTHYVMA 470          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A6A3UV77_9STRA (SHNi-TPR domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UV77_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.090e-16
Identity = 74/260 (28.46%), Postives = 110/260 (42.31%), Query Frame = 1
Query:    7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            +  TL DP+Y  G  L+ D RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+             E   NG                                              ++A +DLE AWE +E+AR IYS       +   +++V+ RLGDL + +  + +A  +F+K L  R  L        +  +AD + + A A  Y  +   ADK   K+ +  +    Y +A
Sbjct:    8 LQTTLTDPRYLRGVALLKDKRLEEAVQAFEDLLRTLCEA-EGKADSLAVAPVYYEYGHALLSLTEATASLFGGAV-------------EGAANGNE------------------------------------DGDGEQDARDAADDLEAAWEVMELARVIYSRFPGDAAVEMQLARVYTRLGDLGLESDQFEQAKSDFEKALLLRRKLLRASKAEDTTQLADLYCQLAIACIYRDST--ADKEGDKEVVPNEEHTHYVMA 215          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A0P1ACD0_PLAHL (Nuclear autoantigenic sperm partial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACD0_PLAHL)

HSP 1 Score: 90.9 bits (224), Expect = 5.140e-16
Identity = 75/257 (29.18%), Postives = 112/257 (43.58%), Query Frame = 1
Query:   16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            TL DP+Y  G  L+ + RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+  A +        +A+                                              T D+     LE AWE +E+AR IYS     E + T + +V+ RLGDL + +  + +A  +F+K L  R  L        +  +AD + + A A  Y  +   ADK  +K+ +  + L  Y +A
Sbjct:   13 TLTDPRYVRGVLLLKEKRLEEAVMAFEDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAADSDEGDGEQDAR---------------------------------------------NTADE-----LEAAWEVMELARVIYSRYPGDEAVETQLVRVYTRLGDLGLESDQFEQARADFEKALVLRKKLLKATNAEDTTQLADLYCQLAIACIYRDST--ADK--EKETIPNEELTHYMMA 214          
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A225WZK3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZK3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.030e-15
Identity = 73/260 (28.08%), Postives = 113/260 (43.46%), Query Frame = 1
Query:    7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774
            +  TL DP+Y  G  L+ + RLEEAV  F  LL T  +   G   S A+AP+YYEYG++LL   E +  +FGGA+  A              +G+                                             +EA +DLE AWE +E+AR IYS     + + T +++V+ RLGDL + +  + +A  +F+K L  R  L        +  +AD + + A A  Y  +    DK    +++  + L  Y +A
Sbjct:  264 LETTLNDPRYLRGVSLLKEKRLEEAVVAFEDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAASSG----------DGEQDA------------------------------------------REAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRTLLKATKAEDTTQLADLYCQLAIACIYRDSTADKDK----ESVPNEELTHYVMA 466          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM34_ECTSI5.840e-16570.79SHNi-TPR domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2DN85_9STRA2.570e-2728.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D061_9STRA6.640e-2129.93SHNi-TPR domain-containing protein n=2 Tax=Monodop... [more]
G4YES5_PHYSP1.840e-1829.57Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
D0MS55_PHYIT7.820e-1729.18Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
W2LI98_PHYPR9.180e-1728.79SHNi-TPR domain-containing protein n=6 Tax=Phytoph... [more]
W2H613_PHYPR2.850e-1628.79Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A6A3UV77_9STRA4.090e-1628.46SHNi-TPR domain-containing protein n=2 Tax=Phytoph... [more]
A0A0P1ACD0_PLAHL5.140e-1629.18Nuclear autoantigenic sperm partial n=1 Tax=Plasmo... [more]
A0A225WZK3_9STRA2.030e-1528.08Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1219contigL-elsbetiae_contig1219:6676..10084 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.9
Seed ortholog evalue5e-08
Seed eggNOG ortholog67593.Physo127075
Preferred nameNASP
KEGG koko:K09398,ko:K11291,ko:K11372
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000123,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0001701,GO:0001824,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007275,GO:0007548,GO:0008150,GO:0008152,GO:0008283,GO:0008406,GO:0008584,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014070,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022414,GO:0022607,GO:0031055,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031497,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033574,GO:0033993,GO:0034080,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034723,GO:0034724,GO:0034728,GO:0036211,GO:0040029,GO:0042221,GO:0042393,GO:0043009,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043954,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045137,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046546,GO:0046661,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0061458,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070827,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:1901360,GO:1901564,GO:1901576,GO:1901654,GO:1901700,GO:1902493,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.SHNi-TPR
EggNOG OGs3QA9K@4776,KOG4563@1,KOG4563@2759
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03036
Ec32 ortholog descriptionTetratricopeptide, SHNi-TPR domain
Ec32 orthologEc-01_010510.1
Exons3
Model size1829
Cds size1200
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1219.1821.1prot_L-elsbetiae_contig1219.1821.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1219 7047..9826 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815418.6912327-UTR-L-elsbetiae_contig1219:6675..70461622815418.6912327-UTR-L-elsbetiae_contig1219:6675..7046Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1219 6676..7046 -
1691682888.304055-UTR-L-elsbetiae_contig1219:6675..70461691682888.304055-UTR-L-elsbetiae_contig1219:6675..7046Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1219 6676..7046 -
1622815418.7350123-UTR-L-elsbetiae_contig1219:9826..100841622815418.7350123-UTR-L-elsbetiae_contig1219:9826..10084Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1219 9827..10084 -
1691682888.344908-UTR-L-elsbetiae_contig1219:9826..100841691682888.344908-UTR-L-elsbetiae_contig1219:9826..10084Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1219 9827..10084 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815418.7025223-CDS-L-elsbetiae_contig1219:7046..77721622815418.7025223-CDS-L-elsbetiae_contig1219:7046..7772Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 7047..7772 -
1691682888.3167648-CDS-L-elsbetiae_contig1219:7046..77721691682888.3167648-CDS-L-elsbetiae_contig1219:7046..7772Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 7047..7772 -
1622815418.715285-CDS-L-elsbetiae_contig1219:8381..85791622815418.715285-CDS-L-elsbetiae_contig1219:8381..8579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 8382..8579 -
1691682888.3257518-CDS-L-elsbetiae_contig1219:8381..85791691682888.3257518-CDS-L-elsbetiae_contig1219:8381..8579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 8382..8579 -
1622815418.7255716-CDS-L-elsbetiae_contig1219:9550..98261622815418.7255716-CDS-L-elsbetiae_contig1219:9550..9826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 9551..9826 -
1691682888.3373172-CDS-L-elsbetiae_contig1219:9550..98261691682888.3373172-CDS-L-elsbetiae_contig1219:9550..9826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1219 9551..9826 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1219.1821.1

>prot_L-elsbetiae_contig1219.1821.1 ID=prot_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=400bp
MAIVEAKINGQAAPAAAAAAAAAAAAAEGDKPGGSAGGGEGEGEGEAGQQ
QAPTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDL
NMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLE
GADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAPPAAGDAACPGKEN
GSSDAAASNGSAESVSKGTGSSNGKGKGEEEGGATKKPPPAMSAIEELED
VRDAIRETIDTMVSGKDMEALAEYKSGAGSTTVGFGDPSPPSAFSGGGGG
SGGGAAGEVTTVGFGAPSGAAAAAATVATGFGGASATGFGGASATAFAPP
GVRGGTAANVMVVKRKGRPAPKAGGASGPPPAKEEGATASPKKAKASNE*
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mRNA from alignment at L-elsbetiae_contig1219:6676..10084-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1219.1821.1 ID=mRNA_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3409bp|location=Sequence derived from alignment at L-elsbetiae_contig1219:6676..10084- (Laminarionema elsbetiae ELsaHSoW15)
AACACCGTGGCGGCGACGCTCGCAGACCCCCAGTACAAGGCTGGGCGCAA GCTCATCGACGACGGCCGCCTGGAAGAGGCCGTCAACTTCTTCAGCGGCC TCCTCGAGACCAGAGTCCAGGTGCTGAGCGGCAACGAGTTGAGCCCGGCG CTGGCTCCCCTCTACTACGAGTACGGCAACTCCCTCCTCTACAACGCCGA GGAGTCCGGCGAGATCTTCGGGGGCGCCATCACCGACGCCGAGGAAAAGA AGAGAGCCATGGCTATCGTCGAGGCTAAAATCAACGGCCAGGCAGCACCT GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGGTGATAA GCCCGGCGGGTCGGCCGGAGGGGGCGAGGGCGAGGGCGAGGGCGAGGCAG GCCAACAACAGGCTCCGACGCCGGATCAGGAGGCGGAGGAGGACCTGGAG ATCGCGTGGGAGAACCTAGAGATGGCGCGCCGGATCTACAGCGAGCTTGA ACTCACGGAAGAGATTCGAACGGCTATCTCAAAGGTGCGACGTGCGTGAT AACGGCCGAGACTTTTTTTTTTTGAAAATTTGAAAATGAAGCACACGCCC CCCCCCCCAGTGCCGGACCGACACACGGCTGTGTGCGGTTTACGTCTGCG TAATGTGCCCCATGATGGATTGTGTATTAGTTGCTTACCTCTGTTTCGCT GTCGACGGTTGAACCAACCAGTCGACTACGAACTTCGCTACATACATAGT GACTACATTACGGTACATGACTACACACACATAAGACTACACACGTGCAT GCAGGGGCAGAAAGAAGTGGCACATCTAACGGAGTAGGCTCATGACCGTG TGCTGTCTTCGCAGAGCTGCAAATTTGTGCGTTGCTACTTTCAGACTACG CTGCCTTACTAACCCAGCATGCAGCATTCATATCGCACAAGACCTCCTTG AAAACAAATGAAACAACTCCGCTCTCTGGAAAAAGTGGGGCAGGTACACA CCTGGAATCAGAACGAATTCTGCCGACCAGGAGAAACAGCCCCAACAACC CCGGCATGTTTCATTGTGAAGTCATCAGTGCTTGGCTAGTGCTCGTGGCA GCCTTCCTGCACAAACCCACATGTTACAGCACTGCCGCCTTTTTGTTGTT GTTGAAAACAACTACGCTGTTGCTGGACTTGGCGCGTAGACCAGGGGCCG CATTCTGCCTCGCGGTGAGGGCAAGACCGCCAGCAAGCCATGGCAAGCGC GCGCGCACGCGTACACAAATCGCCTGTGTTAAATCCAAGTCAGTGTCGGT GCGACTCGGCCCGTCGGTGTTTTATGGCTTGTGGGGTGCGTGAAGCATCG CCTTACGCCGTACACTCTGTCTGCCTCCCACCAAATCCCGGGCGTCTCCT CTTCTAACGTTGTCTGTTGTACATCGTTGTATTTTTTTTATGCATTCCGC GCATCACCCATCTCACTCACAATTATGCCGCCGTTTTTTCGTCTTTTCAC AAAAGGTCCACCTTCGGCTCGGCGACCTGAACATGGTGAACGGCATGTAC AACGAGGCCGCCGACGAGTTCGACAAGTGCCTCACCCACCGGTCGGCCCT CCCCTGCCGCCAGTCGCGCGGCGTGGCGGATGCGCACGTGCGACGAGCGC AGGCCCTCTTCTACGCGTCGACTCTCGAGGGGGCTGACAAGGCAAGAAAA AAAGTATCATAGGGTTACAGTATTAGGCCAGGGCACCTTTGTTGGCCACA ACAATGCTCCAGTGAGGGGCGCGCTTAAACTTTTTGTGGGGGTGCTGGTC GCAGCACGACTGTCTTGTCTGCCCCCCCCCCCCCCCATCCTGTTGGAAGC TCTGCCGGCAGCCCGCGGGCTTCTGCGTCACGATGCTGTACAGCGGCAGA GTTGAGAGCAAAGAGAGGCGACGCAATTTTCTCTGTGGCTTGGCCCCCGG CTGACGTGGATGGGCGTGTTGTCGAGCGTCGGCTACTCCTGTGTACCGGT ATACACGAGAGGCCCCCTCGTTTCCGAGCTCGTGCTTGCTGTTTTGGCTG ATGGTCACGGGATAATTGTTACCACTCGTTAGTCTAGCGTTGACTTTGTT GGTCTCCGGGCTGGAGTACTCAACCATCGCAGAGCCTGCCAGTGCTTGTC CAGCCGTGCGCGAGGCCACTTGCTGTAAGGCAGGTGTCGGGCGGCATGCA TGCATGGTGCGGCTCAAAGCCATAACAGCAGTCAGCTATCACACACTGAC CCGTCTTCGTCTACGCCTGCTTCTTTTTGCTCGAACTGCTATATCATACG ATGTTAAAACAGGACGCGCTTGTGCGACAGTCGCTCGAACAGTACCGCCT AGCGGTGGGAATCTTCGACGCCATGCTGGCTTCCTTGAAAGAAGCACCGC CGGCTGCCGGCGACGCCGCTTGCCCTGGCAAGGAGAACGGCAGCAGCGAT GCCGCCGCGTCCAACGGCAGCGCAGAATCTGTTTCGAAAGGGACCGGGAG CTCAAACGGCAAGGGAAAAGGCGAGGAAGAAGGCGGAGCGACCAAAAAGC CGCCTCCGGCCATGTCCGCGATAGAAGAGCTCGAGGACGTCCGGGACGCC ATCCGGGAGACGATCGACACCATGGTCAGCGGCAAGGACATGGAAGCCCT CGCGGAGTACAAGAGCGGCGCAGGGTCCACCACGGTGGGTTTCGGGGACC CGTCGCCACCGTCGGCATTTTCGGGCGGCGGCGGCGGCAGCGGTGGTGGT GCGGCCGGAGAGGTGACTACCGTCGGCTTCGGAGCACCGTCGGGAGCGGC GGCGGCGGCGGCGACCGTGGCGACCGGGTTCGGCGGCGCGTCTGCAACAG GGTTCGGTGGCGCATCTGCCACGGCATTTGCTCCGCCCGGGGTCAGGGGA GGCACGGCGGCGAACGTGATGGTTGTCAAGAGAAAGGGGAGACCAGCGCC GAAGGCGGGCGGTGCGAGCGGGCCTCCGCCGGCCAAGGAGGAGGGGGCCA CCGCGTCCCCCAAAAAGGCCAAAGCCAGCAACGAGTGAAGAAACGGCCTG AAATGGCTGTGGTATTTTGATTAAAAGTGGGGGTCGAGATCGGGTGTAAA AGTATTTAGTTGCGTGTGTGCGCGCGCGCAGGCGGCCCTCAACAAGCCGG GCCATATATAACCAAAATGCAGGCAGGAATTTCAGCAGAGAGCACCGGCC GCTTTTTGCACTACTACTGTTGGGGGGTCAGACCAGGTTGGTGAAAAAGG GGCGTGCGGTGAATCTTTGCCCGTATATAGATCGATCCCAAAGGTTTTGT CTCTATCTCGGGTTGATAAAGAGTAATCATACAATACGAGCGTGTTTGTT TTGGATTTATGTAGTACGCCGCTTTCATGTTTTTTATCTCCCCGAATGCC CCCAGGGAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1219:6676..10084-

>mRNA_L-elsbetiae_contig1219.1821.1 ID=mRNA_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2400bp|location=Sequence derived from alignment at L-elsbetiae_contig1219:6676..10084- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTATCGTCGAGGCTAAAATCAACGGCCAGGCAGCACCTGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGGTGATAAGCCCGGCG
GGTCGGCCGGAGGGGGCGAGGGCGAGGGCGAGGGCGAGGCAGGCCAACAA
CAGGCTCCGACGCCGGATCAGGAGGCGGAGGAGGACCTGGAGATCGCGTG
GGAGAACCTAGAGATGGCGCGCCGGATCTACAGCGAGCTTGAACTCACGG
AAGAGATTCGAACGGCTATCTCAAAGATGGCTATCGTCGAGGCTAAAATC
AACGGCCAGGCAGCACCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGAGGGTGATAAGCCCGGCGGGTCGGCCGGAGGGGGCGAGGGCG
AGGGCGAGGGCGAGGCAGGCCAACAACAGGCTCCGACGCCGGATCAGGAG
GCGGAGGAGGACCTGGAGATCGCGTGGGAGAACCTAGAGATGGCGCGCCG
GATCTACAGCGAGCTTGAACTCACGGAAGAGATTCGAACGGCTATCTCAA
AGGTCCACCTTCGGCTCGGCGACCTGAACATGGTGAACGGCATGTACAAC
GAGGCCGCCGACGAGTTCGACAAGTGCCTCACCCACCGGTCGGCCCTCCC
CTGCCGCCAGTCGCGCGGCGTGGCGGATGCGCACGTGCGACGAGCGCAGG
CCCTCTTCTACGCGTCGACTCTCGAGGGGGCTGACAAGGCAAGAAAAAAA
GTCCACCTTCGGCTCGGCGACCTGAACATGGTGAACGGCATGTACAACGA
GGCCGCCGACGAGTTCGACAAGTGCCTCACCCACCGGTCGGCCCTCCCCT
GCCGCCAGTCGCGCGGCGTGGCGGATGCGCACGTGCGACGAGCGCAGGCC
CTCTTCTACGCGTCGACTCTCGAGGGGGCTGACAAGGCAAGAAAAAAAGA
CGCGCTTGTGCGACAGTCGCTCGAACAGTACCGCCTAGCGGTGGGAATCT
TCGACGCCATGCTGGCTTCCTTGAAAGAAGCACCGCCGGCTGCCGGCGAC
GCCGCTTGCCCTGGCAAGGAGAACGGCAGCAGCGATGCCGCCGCGTCCAA
CGGCAGCGCAGAATCTGTTTCGAAAGGGACCGGGAGCTCAAACGGCAAGG
GAAAAGGCGAGGAAGAAGGCGGAGCGACCAAAAAGCCGCCTCCGGCCATG
TCCGCGATAGAAGAGCTCGAGGACGTCCGGGACGCCATCCGGGAGACGAT
CGACACCATGGTCAGCGGCAAGGACATGGAAGCCCTCGCGGAGTACAAGA
GCGGCGCAGGGTCCACCACGGTGGGTTTCGGGGACCCGTCGCCACCGTCG
GCATTTTCGGGCGGCGGCGGCGGCAGCGGTGGTGGTGCGGCCGGAGAGGT
GACTACCGTCGGCTTCGGAGCACCGTCGGGAGCGGCGGCGGCGGCGGCGA
CCGTGGCGACCGGGTTCGGCGGCGCGTCTGCAACAGGGTTCGGTGGCGCA
TCTGCCACGGCATTTGCTCCGCCCGGGGTCAGGGGAGGCACGGCGGCGAA
CGTGATGGTTGTCAAGAGAAAGGGGAGACCAGCGCCGAAGGCGGGCGGTG
CGAGCGGGCCTCCGCCGGCCAAGGAGGAGGGGGCCACCGCGTCCCCCAAA
AAGGCCAAAGCCAGCAACGAGTGAGACGCGCTTGTGCGACAGTCGCTCGA
ACAGTACCGCCTAGCGGTGGGAATCTTCGACGCCATGCTGGCTTCCTTGA
AAGAAGCACCGCCGGCTGCCGGCGACGCCGCTTGCCCTGGCAAGGAGAAC
GGCAGCAGCGATGCCGCCGCGTCCAACGGCAGCGCAGAATCTGTTTCGAA
AGGGACCGGGAGCTCAAACGGCAAGGGAAAAGGCGAGGAAGAAGGCGGAG
CGACCAAAAAGCCGCCTCCGGCCATGTCCGCGATAGAAGAGCTCGAGGAC
GTCCGGGACGCCATCCGGGAGACGATCGACACCATGGTCAGCGGCAAGGA
CATGGAAGCCCTCGCGGAGTACAAGAGCGGCGCAGGGTCCACCACGGTGG
GTTTCGGGGACCCGTCGCCACCGTCGGCATTTTCGGGCGGCGGCGGCGGC
AGCGGTGGTGGTGCGGCCGGAGAGGTGACTACCGTCGGCTTCGGAGCACC
GTCGGGAGCGGCGGCGGCGGCGGCGACCGTGGCGACCGGGTTCGGCGGCG
CGTCTGCAACAGGGTTCGGTGGCGCATCTGCCACGGCATTTGCTCCGCCC
GGGGTCAGGGGAGGCACGGCGGCGAACGTGATGGTTGTCAAGAGAAAGGG
GAGACCAGCGCCGAAGGCGGGCGGTGCGAGCGGGCCTCCGCCGGCCAAGG
AGGAGGGGGCCACCGCGTCCCCCAAAAAGGCCAAAGCCAGCAACGAGTGA
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