mRNA_L-elsbetiae_contig1219.1821.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: D7FM34_ECTSI (SHNi-TPR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM34_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 5.840e-165 Identity = 366/517 (70.79%), Postives = 386/517 (74.66%), Query Frame = 1 Query: 1 NTVAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAP--------PAAGDAACPGKENGSSDAA-ASNGSAESVSKGTXXXXXXXKGEEEGGATKKPPPAMSAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGSTTVGFGDPSPPSAFSGXXXXXXXXX------------------AGEVTTVGFGAPSGAAAAAATVATGFGGASAXXXXXXXXXXXAPPGVRGGTAANVMVVKRKGRPAPKAGGASGPP---PAKEEGATA--SPKKAKASNE 1455 + VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSG+E+SP+LAPLYYEYGNSLLYNAEESG +FG AITDAE+KKRAMAIVEA+INGQAA XXXXXXXXXXXXXX XXXXXXXXXXX +PDQEAEEDLE+AWENLEMARRIY LELTE+IRTAI+KVHLRLGDLNMVNGMYNEAADEF+KCL HR ALPCRQSRGVADAHVRRAQALFYASTLEGA+K DALV QSLEQYRLA+G+FDAMLASLKEAP P+A DAA PGKEN SDA SNGS XXX GA PP A SAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSG G+TTVGFG+PSP SAFSGXXXXXXXXX AGEVTTVGFGA G XXXXXXXXXXX ANVMVVKRKGRPAPK A+ P P GA A SPKKAK + E Sbjct: 8 SAVAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGDEMSPSLAPLYYEYGNSLLYNAEESGAVFGDAITDAEQKKRAMAIVEAQINGQAAXXXXXXXXXXXXXXXXGEGATXXXXXXXXXXXAP------SPDQEAEEDLELAWENLEMARRIYGGLELTEDIRTAIAKVHLRLGDLNMVNGMYNEAADEFEKCLDHRLALPCRQSRGVADAHVRRAQALFYASTLEGAEK----DALVGQSLEQYRLAMGVFDAMLASLKEAPEVTAAAADPSA-DAASPGKEN--SDAPNTSNGSXXXXXXXXXXXGAQ-------GAASPPPSAASAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGTGTTTVGFGNPSPASAFSGXXXXXXXXXXXXXXXXXXXGGVAATPAAGEVTTVGFGAQQS------------GXXXXXXXXXXXXXXXXXXXXXXXXXANVMVVKRKGRPAPKPAPAATAPMTAPVAGVGAEAIVSPKKAKPNKE 492
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A7S2DN85_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN85_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.570e-27 Identity = 117/406 (28.82%), Postives = 181/406 (44.58%), Query Frame = 1 Query: 7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTE-EIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAPPAAGDAACPGKENGSSDAAASNGSAESVSKGTXXXXXXXKGEEEGGATKKPPPAMSAIEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGS---TTVGFGDPSPPSAFSGXXXXXXXXXAGEVTTVGFGAPS 1212 +A D + GR+ ++DG ++A+ F LL++ ++ S ELS A P+Y +YGN+LL AEES ++FG ++ + A A +G++ +A ED EIAWE LE+AR I+ + + E+ + KVHLRLGDL +NG + +AA ++++CL R+ + R +AD H AQ Y + D A + D L +QS+ Y+ + IF A+LA + +P NG NG KGT ++E A++ ++ I E D+ ++ETID + G ++ L +S AG TT GFG P+ P A V T+GFG PS Sbjct: 4 LAEITEDSTFIRGRQFLNDGDCDDAIELFEKLLQSVIE--SSGELSLAAGPIYMQYGNALLMKAEESSQVFGESVETKPAESGEQATGLAVDSGESEETEDLPAAGKDPSAKYPEQQQQQA-------------------SDAVEDTEIAWEVLEVARGIFEKHRTSNPEVIEWLGKVHLRLGDLQKLNGNFVDAARDYERCLELRNRIIPANDRRIADVHYSLAQVHEYCAAEP--DHADRADDLTQQSMTHYKSCLNIFAAILAERESSP------------NG-------NG------KGTAGVC-----DQEQTASQ-----LADIAEYRDILVELQETIDALEQGSRLKVLEMKQSVAGPQGVTTNGFGAPATPGA--------------GVETIGFGRPS 337
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A4D9D061_9STRA (SHNi-TPR domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D061_9STRA) HSP 1 Score: 107 bits (267), Expect = 6.640e-21 Identity = 123/411 (29.93%), Postives = 190/411 (46.23%), Query Frame = 1 Query: 7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEK------KRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP---------------DQEAEEDLEIAWENLEMARRIYSELE-LTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLAVGIFDAMLASLKEAPPAAGDAACPGKENGSSDAAASNGSAESVSKGTXXXXXXXKGEEEG-GATKKPPPAMSA-----IEELEDVRDAIRETIDTMVSGKDMEALAEYKSGAGS-TTVGFGDP-----SPPSA 1137 +AA L DP+YK G L G+ +EA+ F + S +++S A AP+Y+ YG++LL AEES ++FG A+T A+EK + G + A XXXXXXXXXXXXX T ++ ++DLE+AWENLE +R IY + E + + ++ + +V+LRLGDL NG + +A D++ + L + SR +AD H + A YAS E + L ++LE Y +F+ ++ ++A AG G+E+GSS +G +EG A K PPP + ++E E++ +RETI+ + +++ A G TT+GFG P PP+A Sbjct: 26 LAAVLEDPRYKQGVALCKRGQFDEALEFLGSCVALAA---SEDDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEXXXXXXXXCEGQGSTSDAAXXXXXXXXXXXXXGVAMAGGASCKKAAATVSSKAIGETAYEDGDSGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPLK--LGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYGKVCDEDSRVIADLHYQLAMMYIYASVEE-----EQAVTLKSKALEHYIQCARVFEILVEKARKAAATAGKLG-DGEEDGSS--------------------FPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEA--TRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAA 403
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: G4YES5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YES5_PHYSP) HSP 1 Score: 100 bits (249), Expect = 1.840e-18 Identity = 76/257 (29.57%), Postives = 113/257 (43.97%), Query Frame = 1 Query: 16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 TL DP+Y G L+ D RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ E NG +EA +DLE AWE +E+AR IYS + + T +++V+ RLGDL + + + +A +F+K L R A + +AD + + A A Y + +K +K+A+ + L Y +A Sbjct: 269 TLTDPRYLRGVALLKDKRLEEAVVAFEDLLRTMCEA-EGKADSLAVAPVYYEYGHALLSLTEATASLFGGAV-------------EGAANGGGDDGEQDA-------------------------------------REAADDLEAAWEVMELARVIYSRFPGDKAVETQLARVYTRLGDLGLESDQFEQAKSDFEKALLLRRKLLKATKAEDTTQLADLYCQLAIACIYRDSSADKEKEGEKEAVPNEELSHYVMA 474
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: D0MS55_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MS55_PHYIT) HSP 1 Score: 95.1 bits (235), Expect = 7.820e-17 Identity = 75/257 (29.18%), Postives = 113/257 (43.97%), Query Frame = 1 Query: 16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 TL DP+Y G L+ + RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ A +AK EA +DLE AWE +E+AR IYS + + T +++V+ RLGDL + + + +A +F+K L R A + +AD + + A A Y + ADK ++ + + + L Y +A Sbjct: 296 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKVDFEKALLLRRKLLKATKADDTTQLADLYCQLAIACIYRDST--ADKDKEVEVVPNEELTHYVMA 499
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: W2LI98_PHYPR (SHNi-TPR domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2LI98_PHYPR) HSP 1 Score: 93.2 bits (230), Expect = 9.180e-17 Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 1 Query: 16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 TL DP+Y G L+ + RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ A +AK EA +DLE AWE +E+AR IYS + + T +++V+ RLGDL + + + +A +F+K L R A + +AD + + A A Y + DK + + + L Y +A Sbjct: 12 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEVTASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRKLLKATQAEDTTQLADLYCQLAIACIYRDSTADKDK----EVVPNEELTHYVMA 213
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: W2H613_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2H613_PHYPR) HSP 1 Score: 93.6 bits (231), Expect = 2.850e-16 Identity = 74/257 (28.79%), Postives = 110/257 (42.80%), Query Frame = 1 Query: 16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHR----SALPCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 TL DP+Y G L+ + RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ A +AK EA +DLE AWE +E+AR IYS + + T +++V+ RLGDL + + + +A +F+K L R A + +AD + + A A Y + DK + + + L Y +A Sbjct: 269 TLTDPRYVRGVSLLKEKRLEEAVVAFGDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAAASGSGDGEQDAK--------------------------------------------------EAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRKLLKATQAEDTTQLADLYCQLAIACIYRDSTADKDK----EVVPNEELTHYVMA 470
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A6A3UV77_9STRA (SHNi-TPR domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UV77_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.090e-16 Identity = 74/260 (28.46%), Postives = 110/260 (42.31%), Query Frame = 1 Query: 7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 + TL DP+Y G L+ D RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ E NG ++A +DLE AWE +E+AR IYS + +++V+ RLGDL + + + +A +F+K L R L + +AD + + A A Y + ADK K+ + + Y +A Sbjct: 8 LQTTLTDPRYLRGVALLKDKRLEEAVQAFEDLLRTLCEA-EGKADSLAVAPVYYEYGHALLSLTEATASLFGGAV-------------EGAANGNE------------------------------------DGDGEQDARDAADDLEAAWEVMELARVIYSRFPGDAAVEMQLARVYTRLGDLGLESDQFEQAKSDFEKALLLRRKLLRASKAEDTTQLADLYCQLAIACIYRDST--ADKEGDKEVVPNEEHTHYVMA 215
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A0P1ACD0_PLAHL (Nuclear autoantigenic sperm partial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACD0_PLAHL) HSP 1 Score: 90.9 bits (224), Expect = 5.140e-16 Identity = 75/257 (29.18%), Postives = 112/257 (43.58%), Query Frame = 1 Query: 16 TLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 TL DP+Y G L+ + RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ A + +A+ T D+ LE AWE +E+AR IYS E + T + +V+ RLGDL + + + +A +F+K L R L + +AD + + A A Y + ADK +K+ + + L Y +A Sbjct: 13 TLTDPRYVRGVLLLKEKRLEEAVMAFEDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAADSDEGDGEQDAR---------------------------------------------NTADE-----LEAAWEVMELARVIYSRYPGDEAVETQLVRVYTRLGDLGLESDQFEQARADFEKALVLRKKLLKATNAEDTTQLADLYCQLAIACIYRDST--ADK--EKETIPNEELTHYMMA 214
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Match: A0A225WZK3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZK3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.030e-15 Identity = 73/260 (28.08%), Postives = 113/260 (43.46%), Query Frame = 1 Query: 7 VAATLADPQYKAGRKLIDDGRLEEAVNFFSGLLETRVQVLSGNELSPALAPLYYEYGNSLLYNAEESGEIFGGAITDAEEKKRAMAIVEAKINGQAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDQEAEEDLEIAWENLEMARRIYSELELTEEIRTAISKVHLRLGDLNMVNGMYNEAADEFDKCLTHRSAL----PCRQSRGVADAHVRRAQALFYASTLEGADKARKKDALVRQSLEQYRLA 774 + TL DP+Y G L+ + RLEEAV F LL T + G S A+AP+YYEYG++LL E + +FGGA+ A +G+ +EA +DLE AWE +E+AR IYS + + T +++V+ RLGDL + + + +A +F+K L R L + +AD + + A A Y + DK +++ + L Y +A Sbjct: 264 LETTLNDPRYLRGVSLLKEKRLEEAVVAFEDLLRTMCEA-EGKSDSLAVAPVYYEYGHALLSLTEATASLFGGAVEGAASSG----------DGEQDA------------------------------------------REAADDLEAAWEVMELARVIYSRYPGDQAVETQLARVYTRLGDLGLESDQFEQAKADFEKALLLRRTLLKATKAEDTTQLADLYCQLAIACIYRDSTADKDK----ESVPNEELTHYVMA 466 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1219.1821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1219.1821.1 >prot_L-elsbetiae_contig1219.1821.1 ID=prot_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=400bp MAIVEAKINGQAAPAAAAAAAAAAAAAEGDKPGGSAGGGEGEGEGEAGQQback to top mRNA from alignment at L-elsbetiae_contig1219:6676..10084- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1219.1821.1 ID=mRNA_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3409bp|location=Sequence derived from alignment at L-elsbetiae_contig1219:6676..10084- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1219:6676..10084- >mRNA_L-elsbetiae_contig1219.1821.1 ID=mRNA_L-elsbetiae_contig1219.1821.1|Name=mRNA_L-elsbetiae_contig1219.1821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2400bp|location=Sequence derived from alignment at L-elsbetiae_contig1219:6676..10084- (Laminarionema elsbetiae ELsaHSoW15)back to top |