mRNA_L-elsbetiae_contig12185.1817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: D8LIE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE2_ECTSI) HSP 1 Score: 333 bits (855), Expect = 3.380e-108 Identity = 180/259 (69.50%), Postives = 202/259 (77.99%), Query Frame = 1 Query: 22 EVLDVVDAKENRAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAE--VAPANGSN----GAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +VL +VDA +N+AGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVAD STRSWRR+SK F +Q ++++ T + + + VE ER E APANGS+ P PLRAWCHQDAYVRTSSVRYSN PSKVKD+F+HLTNNAVQRRSPSYG DEPGNKLTLADLQ+WLDGDES HKG A GWVE+TLRPRM S+VATSVAAA+ AGIN+RGRPYAFELLGYDFMVDDDLRV+LIEV Sbjct: 280 DVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRSWRRRSKPFQQQQTPRGHASKGTARVSSDSESQLSEKAGSVE--------ERGEPKAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYSNHPSKVKDRFIHLTNNAVQRRSPSYGHDEPGNKLTLADLQDWLDGDESIHKGNACGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIEV 530
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A6H5LNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNH0_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.130e-107 Identity = 182/259 (70.27%), Postives = 205/259 (79.15%), Query Frame = 1 Query: 13 ALQEVLDVVDAKENRAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSN----GAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIE 777 A Q+VL +VDA +N+AGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVAD STR+WRR+SK F +Q ++++ T +G G VE K GE + APANGS+ P PLRAWCHQDAYVRTSSVRY+N PSKVKD+FVHLTNNAVQR+SPSYGQDEPGNKLTLADLQ+WLDGD S HKGKA GWVE+TLRPRM S+VATSVAAA+ AGIN+RGRPYAFELLGYDFMVDDDLRV+LIE Sbjct: 470 ASQDVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRAWRRRSKPFRQQQTPRGHASKGTARTSSGTKSPLSGKVGSVE-----KQGEP-KAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYTNHPSKVKDRFVHLTNNAVQRQSPSYGQDEPGNKLTLADLQDWLDGDGSTHKGKAFGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIE 722
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A7S3US62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US62_HETAK) HSP 1 Score: 120 bits (300), Expect = 4.790e-28 Identity = 89/256 (34.77%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 19 QEVLDVVDA--KENRAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +EVL +VD K R GW+VQRY+ PLLVRGRKFD+R +VL+VA R R+P L A ++ YVRTSS R+ ++ DKF+HLTN+AVQ + YG+ E GNK++ + Q ++D + GKA +VEE + P ++ L SV A A INK R FELLGYDFM+DD+ ++ LIEV Sbjct: 126 EEVLALVDRPLKSGDRRRFGWIVQRYMMNPLLVRGRKFDVRCWVLLVA--------------------------------------------------------RPXXXXXXXXXXXXXXRRPG--LAAHLFREGYVRTSSARFDARRDRLGDKFIHLTNDAVQNKGKDYGKYEAGNKMSFEEFQAYID---ETYDGKAN-YVEEHMLPGIKELARLSVEAVALE-INKSRRKCCFELLGYDFMIDDNFQISLIEV 318
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0BCS9_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BCS9_PARTE) HSP 1 Score: 108 bits (269), Expect = 4.520e-23 Identity = 72/236 (30.51%), Postives = 110/236 (46.61%), Query Frame = 1 Query: 73 WVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +V+Q+YIERPLL+ GRKFDIR +VLV + ++ + ++AY+RTS +S D KD+++HLTNNAVQ+ + +YGQ E GN+L+L Q+ LD E+ + + +GW P ++ +V ++ S +NKR R Y +LLGYDFM+D++L++WLIEV Sbjct: 380 FVIQKYIERPLLLSGRKFDIRCWVLVSQE-----------------------------------------------------------------------------MQYFLFKEAYIRTSGTAFSLDN---KDRYIHLTNNAVQKNAQNYGQFEDGNQLSLNRFQQLLDQQETTYNFRKQGW------PMIKDVVKITM---NSTRMNKRNRKYGMQLLGYDFMIDENLKLWLIEV 526
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A7S3ZJX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJX7_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.030e-22 Identity = 59/131 (45.04%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 391 LRAWCHQD-AYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 ++A+ H+ +YVRTSS +YS P + K VHL N+ VQ + SYG+ E GNKL LAD + +D W+EETL PRM++++ ++ AA A +N + R FELLG+DFM+D DLRV LIE+ Sbjct: 253 IQAYAHRSCSYVRTSSTKYSLKPQDLAKKGVHLVNDGVQNKEESYGKFEAGNKLALADFAQRVDA--------PANWLEETLIPRMEAIMRYTI-DAAHARLNPKKRQACFELLGFDFMLDADLRVDLIEI 374
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A0G4G063_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G063_VITBC) HSP 1 Score: 107 bits (267), Expect = 1.120e-22 Identity = 78/249 (31.33%), Postives = 118/249 (47.39%), Query Frame = 1 Query: 40 DAKENRAGRSG--WVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 D + GR G ++Q+YIERP LV GRKFDIR++ L+V + + EV +RA+ ++D Y+RTSS Y D D+ +HLTN+AVQ++S SYG+ E NKL+ A+ Q++LD + K + ++E L +MQ ++A + AAA A +N R ++FE+ GYDFMVD+ +VWL+E+ Sbjct: 404 DVEMMVGGRDGKSTIIQKYIERPFLVHGRKFDIRVYGLMVEEHRSAQ----------------------------------------------------EVI-----------------VRAYMYRDGYLRTSSETYRPD---CFDRMIHLTNDAVQKKSESYGRFEAANKLSYAEFQKYLD----TCRPKDQVVIQEHLVTQMQQIMADTFRAAA-ANMNTNRRQHSFEIFGYDFMVDESNKVWLLEI 575
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0DGD7_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DGD7_PARTE) HSP 1 Score: 107 bits (266), Expect = 1.160e-22 Identity = 69/236 (29.24%), Postives = 110/236 (46.61%), Query Frame = 1 Query: 73 WVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +V+Q+YIERPLL+ GRKFDIR +VL+ + + + ++AY+RTS +S + KD+++HLTNNAVQ+ + +YGQ E GN+L+L Q+ LD E+ + + GW P+++ +V ++ +S +NKR R Y ++LGYDFM+D++L++WLIEV Sbjct: 389 FVIQKYIERPLLLGGRKFDIRCWVLITHE-----------------------------------------------------------------------------MHYYLFREAYIRTSGTTFSLEN---KDRYIHLTNNAVQKNAQNYGQFEDGNQLSLKRFQKQLDQQETKYDFRKEGW------PKIKEVVKLTL---SSTRMNKRNRKYGMQILGYDFMIDENLKLWLIEV 535
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0DPJ1_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DPJ1_PARTE) HSP 1 Score: 104 bits (260), Expect = 7.260e-22 Identity = 72/237 (30.38%), Postives = 109/237 (45.99%), Query Frame = 1 Query: 73 WVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGD-ESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +V+Q+YIERPLL+ GRKFDIR +VL+ D ++ + ++AY+RTS +S D KD+++HLTNNAVQ+ + +YGQ E GN+L+L Q+ LD E+ + + GW P ++ +V ++ S +NKR R Y +LLGYDFM+D++L++WLIEV Sbjct: 381 FVIQKYIERPLLLSGRKFDIRCWVLISQD-----------------------------------------------------------------------------MQYFLFKEAYIRTSGTTFSLDN---KDRYIHLTNNAVQKNAQNYGQFEDGNQLSLKRFQQLLDSQQETVYNFRKEGW------PVIKDVVKITM---NSTRLNKRNRKYGMQLLGYDFMIDENLKLWLIEV 528
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A1Q9EVN9_SYMMI (Protein monoglycylase TTLL8 n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EVN9_SYMMI) HSP 1 Score: 101 bits (252), Expect = 9.960e-21 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 370 ARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 A+ P L + ++ AY+RT+S SN KD+FVHL N+AVQ+ SYG+ E NK++L++ Q +LD H G+ + L P+M++L+A ++ AA + IN R + FE+ G+DFMVD++ RVWLIEV Sbjct: 396 AQDPAGVLHGYFYRQAYLRTTS---SNFTLATKDRFVHLNNDAVQKHGNSYGKYEAANKMSLSEFQLYLD----AHHGRDCLSIHSGLLPQMKALMADTLRAAGNK-INPRSIQHCFEVFGFDFMVDENFRVWLIEV 524
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Match: A0A7J6UJJ5_PEROL (Non-specific serine/threonine protein kinase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6UJJ5_PEROL) HSP 1 Score: 101 bits (252), Expect = 1.120e-20 Identity = 72/249 (28.92%), Postives = 111/249 (44.58%), Query Frame = 1 Query: 43 AKENRAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADSSTRSWRRKSKLFPKQNLDPSNSNQKTREDGNGNPMKEGGAGDGVELSAGRKSGERAEVAPANGSNGAAAARQPPSPLRAWCHQDAYVRTSSVRYSNDPSKVK---DKFVHLTNNAVQRRSPSYGQDEPGNKLTLADLQEWLDGDESGHKGKARGWVEETLRPRMQSLVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEV 780 +KE++ + WV+Q+YI+RP+L+ RKFDIR++++ L P+ L A+C+++ YVRT+SV+Y DPS+ DK +HL NNA+Q+R +YGQ E GN+++ DLQ + D + G R V +R M +A S+ A + +F++ GYDFM+D+D VWLIEV Sbjct: 1110 SKESKGAVANWVLQKYIDRPMLINRRKFDIRMWLV---------------------LTPT--------------------------------------------------------LHAYCYREGYVRTASVQY--DPSRKNGEGDKMMHLCNNAIQKRGDNYGQYEDGNQMSFDDLQAYADENAGGPSCPPRLDVHGEMRSAMYRAMAISLHATLRQFRSPNSN--SFQIFGYDFMIDEDGGVWLIEV 1277 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12185.1817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12185.1817.1 >prot_L-elsbetiae_contig12185.1817.1 ID=prot_L-elsbetiae_contig12185.1817.1|Name=mRNA_L-elsbetiae_contig12185.1817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=261bp MLLAALQEVLDVVDAKENRAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVback to top mRNA from alignment at L-elsbetiae_contig12185:1651..5255- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12185.1817.1 ID=mRNA_L-elsbetiae_contig12185.1817.1|Name=mRNA_L-elsbetiae_contig12185.1817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3605bp|location=Sequence derived from alignment at L-elsbetiae_contig12185:1651..5255- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12185:1651..5255- >mRNA_L-elsbetiae_contig12185.1817.1 ID=mRNA_L-elsbetiae_contig12185.1817.1|Name=mRNA_L-elsbetiae_contig12185.1817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1566bp|location=Sequence derived from alignment at L-elsbetiae_contig12185:1651..5255- (Laminarionema elsbetiae ELsaHSoW15)back to top |