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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1393 |
| Cds size | 1371 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815418.1033807-UTR-L-elsbetiae_contig12181:3248..3269 | 1622815418.1033807-UTR-L-elsbetiae_contig12181:3248..3269 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 3249..3269 + |
| 1691682888.0067408-UTR-L-elsbetiae_contig12181:3248..3269 | 1691682888.0067408-UTR-L-elsbetiae_contig12181:3248..3269 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 3249..3269 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815418.118944-CDS-L-elsbetiae_contig12181:3269..4640 | 1622815418.118944-CDS-L-elsbetiae_contig12181:3269..4640 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 3270..4640 + |
| 1691682888.0164182-CDS-L-elsbetiae_contig12181:3269..4640 | 1691682888.0164182-CDS-L-elsbetiae_contig12181:3269..4640 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 3270..4640 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12181.1814.1 >prot_L-elsbetiae_contig12181.1814.1 ID=prot_L-elsbetiae_contig12181.1814.1|Name=mRNA_L-elsbetiae_contig12181.1814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=457bp
MSESGQQDDALHEEEAVGEVVVIEDDSYERRRSVTAATPGSSSRPPARGR
SHSSAGIHPYATDVSALSVEVAVAKVQQQQQEWHRQQQQQQQQLTEQGET
KKGSHRRARSMMSRVLTPMRGSSGAGSVARGSRMLSMEERPRRNSSNAIR
TERASSLEAQQEEKQVDGELSDEGNETTEEEQEHQCVVRRHEPQRAVPSI
LDLFKLQPAISTGGTSSPVPARAGASSLSTSGNLAGSLDVRDHPGIIDDV
EHEGVAEASSDSHAGRWCFDTEGLPQQTMSPSLSESYTYYPALNSPPTAY
RDESAGTAAPTPPLPAATSRRGCGNTINTCSRIKDNDGDASTAFSFREQQ
QQQQQQQQQQQQWQGDSPLESPPAALPAVTVYTRGPLHNGPGFDASGGGR
RATAALQQQELARHVREASTNTVDAGRESRLPFMGGVTSVIAGRSDGRAA
DQIISSE back to topmRNA from alignment at L-elsbetiae_contig12181:3249..4640+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig12181.1814.1 ID=mRNA_L-elsbetiae_contig12181.1814.1|Name=mRNA_L-elsbetiae_contig12181.1814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig12181:3249..4640+ (Laminarionema elsbetiae ELsaHSoW15)
CGTGGATGTGCGTAAAGAGCCATGTCGGAATCCGGACAGCAGGATGATGC
ACTTCACGAGGAGGAGGCTGTTGGCGAGGTGGTGGTCATTGAAGACGATT
CCTACGAACGCCGCCGATCGGTCACTGCAGCAACCCCCGGTAGCAGCTCA
CGTCCGCCCGCAAGGGGTAGGTCCCACTCAAGCGCAGGGATCCACCCGTA
CGCGACGGACGTGAGTGCTTTATCGGTTGAAGTCGCCGTAGCAAAGGTGC
AGCAGCAGCAGCAGGAGTGGCATCGGCAGCAGCAGCAGCAACAGCAGCAG
CTAACTGAGCAGGGGGAGACTAAGAAGGGCTCCCATCGGAGGGCCAGGTC
GATGATGTCGCGCGTCCTCACGCCCATGCGGGGCAGCTCAGGCGCGGGTA
GCGTAGCGAGAGGGTCCCGTATGCTTTCCATGGAGGAGCGACCTAGAAGG
AACTCCTCCAACGCGATTAGGACTGAAAGAGCGAGCTCGCTGGAGGCACA
GCAGGAGGAAAAGCAAGTGGACGGAGAACTTTCAGACGAGGGTAATGAAA
CAACAGAGGAGGAGCAGGAGCACCAGTGCGTTGTTCGACGGCACGAGCCG
CAGCGAGCGGTGCCTAGCATCCTTGATCTCTTCAAGCTCCAGCCCGCGAT
CTCGACAGGCGGCACCTCGTCTCCCGTTCCTGCAAGGGCGGGGGCTTCTT
CCCTCTCCACCTCCGGAAATCTGGCTGGCTCTCTGGACGTACGGGATCAC
CCGGGGATAATTGATGACGTCGAGCATGAGGGGGTCGCCGAAGCCAGTAG
TGACAGCCACGCCGGCAGGTGGTGCTTCGATACGGAGGGGCTCCCGCAGC
AAACGATGTCGCCATCGCTGTCCGAAAGCTACACCTACTACCCCGCCCTC
AACTCCCCCCCAACGGCCTACCGAGATGAAAGCGCGGGAACGGCAGCACC
AACGCCGCCGCTGCCAGCGGCAACGAGCCGCCGCGGCTGTGGCAACACTA
TCAACACCTGCAGCAGAATAAAGGACAACGACGGTGACGCCTCTACCGCT
TTTTCTTTCCGAGAACAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCA
GCAGCAGTGGCAGGGGGATAGCCCGTTAGAGAGCCCTCCGGCGGCACTGC
CGGCAGTAACGGTGTACACCAGAGGACCTCTGCACAACGGGCCGGGTTTT
GATGCCAGTGGTGGCGGCAGGAGAGCCACCGCTGCTCTTCAGCAGCAAGA
ACTAGCCCGGCATGTGCGAGAGGCGTCGACCAACACTGTGGATGCGGGCA
GGGAGAGTCGGTTGCCGTTCATGGGGGGAGTGACATCGGTGATTGCGGGG
AGATCGGATGGACGCGCGGCTGACCAGATCATCAGTAGTGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig12181:3249..4640+ >mRNA_L-elsbetiae_contig12181.1814.1 ID=mRNA_L-elsbetiae_contig12181.1814.1|Name=mRNA_L-elsbetiae_contig12181.1814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2742bp|location=Sequence derived from alignment at L-elsbetiae_contig12181:3249..4640+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGAATCCGGACAGCAGGATGATGCACTTCACGAGGAGGAGGCTGT
TGGCGAGGTGGTGGTCATTGAAGACGATTCCTACGAACGCCGCCGATCGG
TCACTGCAGCAACCCCCGGTAGCAGCTCACGTCCGCCCGCAAGGGGTAGG
TCCCACTCAAGCGCAGGGATCCACCCGTACGCGACGGACGTGAGTGCTTT
ATCGGTTGAAGTCGCCGTAGCAAAGGTGCAGCAGCAGCAGCAGGAGTGGC
ATCGGCAGCAGCAGCAGCAACAGCAGCAGCTAACTGAGCAGGGGGAGACT
AAGAAGGGCTCCCATCGGAGGGCCAGGTCGATGATGTCGCGCGTCCTCAC
GCCCATGCGGGGCAGCTCAGGCGCGGGTAGCGTAGCGAGAGGGTCCCGTA
TGCTTTCCATGGAGGAGCGACCTAGAAGGAACTCCTCCAACGCGATTAGG
ACTGAAAGAGCGAGCTCGCTGGAGGCACAGCAGGAGGAAAAGCAAGTGGA
CGGAGAACTTTCAGACGAGGGTAATGAAACAACAGAGGAGGAGCAGGAGC
ACCAGTGCGTTGTTCGACGGCACGAGCCGCAGCGAGCGGTGCCTAGCATC
CTTGATCTCTTCAAGCTCCAGCCCGCGATCTCGACAGGCGGCACCTCGTC
TCCCGTTCCTGCAAGGGCGGGGGCTTCTTCCCTCTCCACCTCCGGAAATC
TGGCTGGCTCTCTGGACGTACGGGATCACCCGGGGATAATTGATGACGTC
GAGCATGAGGGGGTCGCCGAAGCCAGTAGTGACAGCCACGCCGGCAGGTG
GTGCTTCGATACGGAGGGGCTCCCGCAGCAAACGATGTCGCCATCGCTGT
CCGAAAGCTACACCTACTACCCCGCCCTCAACTCCCCCCCAACGGCCTAC
CGAGATGAAAGCGCGGGAACGGCAGCACCAACGCCGCCGCTGCCAGCGGC
AACGAGCCGCCGCGGCTGTGGCAACACTATCAACACCTGCAGCAGAATAA
AGGACAACGACGGTGACGCCTCTACCGCTTTTTCTTTCCGAGAACAGCAG
CAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGTGGCAGGGGGATAG
CCCGTTAGAGAGCCCTCCGGCGGCACTGCCGGCAGTAACGGTGTACACCA
GAGGACCTCTGCACAACGGGCCGGGTTTTGATGCCAGTGGTGGCGGCAGG
AGAGCCACCGCTGCTCTTCAGCAGCAAGAACTAGCCCGGCATGTGCGAGA
GGCGTCGACCAACACTGTGGATGCGGGCAGGGAGAGTCGGTTGCCGTTCA
TGGGGGGAGTGACATCGGTGATTGCGGGGAGATCGGATGGACGCGCGGCT
GACCAGATCATCAGTAGTGAGATGTCGGAATCCGGACAGCAGGATGATGC
ACTTCACGAGGAGGAGGCTGTTGGCGAGGTGGTGGTCATTGAAGACGATT
CCTACGAACGCCGCCGATCGGTCACTGCAGCAACCCCCGGTAGCAGCTCA
CGTCCGCCCGCAAGGGGTAGGTCCCACTCAAGCGCAGGGATCCACCCGTA
CGCGACGGACGTGAGTGCTTTATCGGTTGAAGTCGCCGTAGCAAAGGTGC
AGCAGCAGCAGCAGGAGTGGCATCGGCAGCAGCAGCAGCAACAGCAGCAG
CTAACTGAGCAGGGGGAGACTAAGAAGGGCTCCCATCGGAGGGCCAGGTC
GATGATGTCGCGCGTCCTCACGCCCATGCGGGGCAGCTCAGGCGCGGGTA
GCGTAGCGAGAGGGTCCCGTATGCTTTCCATGGAGGAGCGACCTAGAAGG
AACTCCTCCAACGCGATTAGGACTGAAAGAGCGAGCTCGCTGGAGGCACA
GCAGGAGGAAAAGCAAGTGGACGGAGAACTTTCAGACGAGGGTAATGAAA
CAACAGAGGAGGAGCAGGAGCACCAGTGCGTTGTTCGACGGCACGAGCCG
CAGCGAGCGGTGCCTAGCATCCTTGATCTCTTCAAGCTCCAGCCCGCGAT
CTCGACAGGCGGCACCTCGTCTCCCGTTCCTGCAAGGGCGGGGGCTTCTT
CCCTCTCCACCTCCGGAAATCTGGCTGGCTCTCTGGACGTACGGGATCAC
CCGGGGATAATTGATGACGTCGAGCATGAGGGGGTCGCCGAAGCCAGTAG
TGACAGCCACGCCGGCAGGTGGTGCTTCGATACGGAGGGGCTCCCGCAGC
AAACGATGTCGCCATCGCTGTCCGAAAGCTACACCTACTACCCCGCCCTC
AACTCCCCCCCAACGGCCTACCGAGATGAAAGCGCGGGAACGGCAGCACC
AACGCCGCCGCTGCCAGCGGCAACGAGCCGCCGCGGCTGTGGCAACACTA
TCAACACCTGCAGCAGAATAAAGGACAACGACGGTGACGCCTCTACCGCT
TTTTCTTTCCGAGAACAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCA
GCAGCAGTGGCAGGGGGATAGCCCGTTAGAGAGCCCTCCGGCGGCACTGC
CGGCAGTAACGGTGTACACCAGAGGACCTCTGCACAACGGGCCGGGTTTT
GATGCCAGTGGTGGCGGCAGGAGAGCCACCGCTGCTCTTCAGCAGCAAGA
ACTAGCCCGGCATGTGCGAGAGGCGTCGACCAACACTGTGGATGCGGGCA
GGGAGAGTCGGTTGCCGTTCATGGGGGGAGTGACATCGGTGATTGCGGGG
AGATCGGATGGACGCGCGGCTGACCAGATCATCAGTAGTGAG back to top
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