|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 4 |
| Model size | 1378 |
| Cds size | 1098 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815417.9703457-UTR-L-elsbetiae_contig12181:765..976 | 1622815417.9703457-UTR-L-elsbetiae_contig12181:765..976 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 766..976 - |
| 1691682887.9536014-UTR-L-elsbetiae_contig12181:765..976 | 1691682887.9536014-UTR-L-elsbetiae_contig12181:765..976 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 766..976 - |
| 1622815418.0505714-UTR-L-elsbetiae_contig12181:2911..2980 | 1622815418.0505714-UTR-L-elsbetiae_contig12181:2911..2980 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 2912..2980 - |
| 1691682887.9977472-UTR-L-elsbetiae_contig12181:2911..2980 | 1691682887.9977472-UTR-L-elsbetiae_contig12181:2911..2980 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12181 2912..2980 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815417.9889975-CDS-L-elsbetiae_contig12181:976..1238 | 1622815417.9889975-CDS-L-elsbetiae_contig12181:976..1238 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 977..1238 - |
| 1691682887.9621274-CDS-L-elsbetiae_contig12181:976..1238 | 1691682887.9621274-CDS-L-elsbetiae_contig12181:976..1238 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 977..1238 - |
| 1622815418.0049353-CDS-L-elsbetiae_contig12181:1481..1571 | 1622815418.0049353-CDS-L-elsbetiae_contig12181:1481..1571 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 1482..1571 - |
| 1691682887.9703178-CDS-L-elsbetiae_contig12181:1481..1571 | 1691682887.9703178-CDS-L-elsbetiae_contig12181:1481..1571 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 1482..1571 - |
| 1622815418.0184388-CDS-L-elsbetiae_contig12181:1705..2439 | 1622815418.0184388-CDS-L-elsbetiae_contig12181:1705..2439 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 1706..2439 - |
| 1691682887.9784098-CDS-L-elsbetiae_contig12181:1705..2439 | 1691682887.9784098-CDS-L-elsbetiae_contig12181:1705..2439 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 1706..2439 - |
| 1622815418.0349925-CDS-L-elsbetiae_contig12181:2899..2911 | 1622815418.0349925-CDS-L-elsbetiae_contig12181:2899..2911 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 2900..2911 - |
| 1691682887.9878793-CDS-L-elsbetiae_contig12181:2899..2911 | 1691682887.9878793-CDS-L-elsbetiae_contig12181:2899..2911 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12181 2900..2911 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12181.1813.1 >prot_L-elsbetiae_contig12181.1813.1 ID=prot_L-elsbetiae_contig12181.1813.1|Name=mRNA_L-elsbetiae_contig12181.1813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=366bp
MRRKVRPAAATSRSRSDVRMRPASAPLERGKKRLSPSAKSSNHPPPVLVP
SLANVSNTTVNGIGRAELEAWATLSQNTRRSHESRPTVTFGRARPNSAGE
HHCRYSREGGTPGRGQTTRTVVPRGTDMHISDLKQVGPGQNYNTAGTVVT
PAEANGVAWSKQQHQRAAQVSSMPVPSAGKCSSGFRGTADGAHNRRSSYH
DRPGCDDGCGRTLVRDQHLDGRSMGRAERDEAGHQRENHEGRRSDISVRL
LREHAKKARKEEKAFLRSMRAEAKAKEDSEIEMIHRATQWARDLDKNVLY
LPHRVGGKLHVLKIENGFAAARLDEGERRGGMRYFEENGKVMSVDFFLKA
DHARYANTSRIPRKV* back to topmRNA from alignment at L-elsbetiae_contig12181:766..2980- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig12181.1813.1 ID=mRNA_L-elsbetiae_contig12181.1813.1|Name=mRNA_L-elsbetiae_contig12181.1813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2215bp|location=Sequence derived from alignment at L-elsbetiae_contig12181:766..2980- (Laminarionema elsbetiae ELsaHSoW15)
CAAGCCGCGTTGGATATACACCGGAGAGCAATTTCAGCCGTCCGCGAACG
TGTGAGGACAGGGAAAGGAATGCGAAGAAAGGTAACGCTGGAAAAAGTAC
TGATGTCTCTACTAAACTGTATCGACACGCGGATTTGAGCGATGTACATA
TGTATGTATTTTACCTACATCCGTACGGAGTTCGCTGATTGGTAGCGTGT
GTCGACCTATGTAGTCTAGATATCTAGATAGTTAGATATCCTCCTATCTA
TTATAGCGGTTATCTACGTAGAAGACTAGACTAGCTCTATGTAGTCTAGA
TACTCTCGAGTCTAGTTTCTAGACTGGATATGTATCTACTTAGCAGTAGT
AGATATGTATCTACTTAGCAGTAGTGGTTGTAGGAGTAGTATATCTAGAT
AATCTACAGTCTAGATATTCTGTGGCGCGCAATGTGTTCCTTCCTGAGCA
CCGAGAGCTTCCACCCTGATGAAAGTAACATTAGACTAGTCTAGATTATT
GTGTCTCATATGCTTCGCATCACGTTCTCTTGTGGCAAAAGGTCCGGCCA
GCAGCTGCAACCTCGCGATCGCGTTCGGACGTAAGAATGCGGCCGGCTTC
CGCTCCGTTGGAGAGGGGGAAGAAGCGCCTGTCGCCCTCTGCCAAGAGCA
GCAATCATCCTCCTCCTGTTCTCGTGCCGAGCCTCGCAAACGTTTCGAAT
ACCACTGTGAATGGAATAGGTCGAGCCGAGTTGGAAGCATGGGCAACGCT
GAGCCAAAATACGCGACGATCTCATGAATCGAGACCAACGGTAACATTCG
GCAGAGCTCGTCCAAACAGCGCCGGGGAACACCACTGTCGTTATTCTCGA
GAGGGAGGCACACCTGGCCGCGGGCAAACGACCAGGACGGTTGTCCCCAG
AGGAACCGATATGCATATTTCCGATCTTAAACAGGTCGGCCCCGGCCAGA
ACTATAATACTGCAGGCACTGTGGTGACTCCAGCCGAAGCAAACGGAGTG
GCGTGGTCGAAGCAGCAACATCAGCGCGCAGCGCAAGTCTCGTCGATGCC
GGTGCCATCGGCTGGAAAATGTAGCTCTGGCTTTCGCGGGACGGCCGACG
GTGCTCACAACCGCCGCAGCAGTTATCATGATCGACCGGGATGTGATGAT
GGTTGCGGCCGAACGCTTGTTCGAGATCAACATCTTGATGGCCGCAGCAT
GGGTCGAGCGGAGCGCGACGAGGCTGGCCATCAGAGGGAGAACCATGAGG
GTCGCCGATCTGATATTTCTGTCCGGTGTGTGGCCCTGCACTCACAAATG
CACCAGCAATTCAGCCGAGTAGTACAACACACTTGAAAGTCTCATATCTA
CGCATGCATAAGTCAACAATAGCCGCCGGTTGTATTGTAACTGGCTTATG
TTTGTACAGGCTTCTCCGCGAGCATGCGAAAAAAGCCAGGAAGGAGGAGA
AGGCTTTTCTCAGGTCGATGAGGGCTGAAGCAAAGGCTAAGGAAGACAGG
TAGGCTATAGCGGTCAGGGAGATTCGTGGTTTGTATGAACAGCCGAGCGG
TGAGTGATGCCAGACGTTGAGAGTACACAAACAAACGAATATATATGTAT
CTAGGCCCATAGATACGTATTAAAAGTGCGTATGTTACAAAGATAGTAGG
CATTTGTGTGAGGTGGGCACCGTACCTAAACCACCCATTTGTGGTGGGGA
TTGTCCCAATCTTGCACGCCGTATCGTACTTGGCGTGTACAGCGAGATCG
AGATGATACACAGAGCGACTCAGTGGGCCCGGGATCTGGATAAAAACGTA
TTGTACTTGCCGCACCGCGTGGGTGGAAAGTTGCACGTTCTCAAGATCGA
GAACGGCTTTGCAGCGGCGAGACTCGATGAGGGTGAAAGGCGCGGCGGCA
TGAGATATTTTGAGGAGAACGGGAAAGTAATGTCGGTTGACTTCTTCTTG
AAGGCAGATCACGCCAGGTATGCAAACACATCCCGCATCCCGCGCAAGGT
CTGAGTAAAGGTTCTACTTCGTACGATATTTAGTTGCTAAAACTCCCTTC
GTGCAGGCATGAGCCTATGGACAATGACAGTAAAGCGTAGCTTGGAAGCC
AACTGAAATTCCGCCGCGTTTCGATGTAAGGGACACGTTTCGATGTAAGG
GACAGGTTTCAAAAACTGGAAGGCTTTTTTTCTCCCCGGGCACGCACTTT
TTGCAACCTGCCGCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig12181:766..2980- >mRNA_L-elsbetiae_contig12181.1813.1 ID=mRNA_L-elsbetiae_contig12181.1813.1|Name=mRNA_L-elsbetiae_contig12181.1813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2196bp|location=Sequence derived from alignment at L-elsbetiae_contig12181:766..2980- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGAAGAAAGATGCGAAGAAAGGTCCGGCCAGCAGCTGCAACCTCGCG
ATCGCGTTCGGACGTAAGAATGCGGCCGGCTTCCGCTCCGTTGGAGAGGG
GGAAGAAGCGCCTGTCGCCCTCTGCCAAGAGCAGCAATCATCCTCCTCCT
GTTCTCGTGCCGAGCCTCGCAAACGTTTCGAATACCACTGTGAATGGAAT
AGGTCGAGCCGAGTTGGAAGCATGGGCAACGCTGAGCCAAAATACGCGAC
GATCTCATGAATCGAGACCAACGGTAACATTCGGCAGAGCTCGTCCAAAC
AGCGCCGGGGAACACCACTGTCGTTATTCTCGAGAGGGAGGCACACCTGG
CCGCGGGCAAACGACCAGGACGGTTGTCCCCAGAGGAACCGATATGCATA
TTTCCGATCTTAAACAGGTCGGCCCCGGCCAGAACTATAATACTGCAGGC
ACTGTGGTGACTCCAGCCGAAGCAAACGGAGTGGCGTGGTCGAAGCAGCA
ACATCAGCGCGCAGCGCAAGTCTCGTCGATGCCGGTGCCATCGGCTGGAA
AATGTAGCTCTGGCTTTCGCGGGACGGCCGACGGTGCTCACAACCGCCGC
AGCAGTTATCATGATCGACCGGGATGTGATGATGGTTGCGGCCGAACGCT
TGTTCGAGATCAACATCTTGATGGCCGCAGCATGGGTCGAGCGGAGCGCG
ACGAGGCTGGCCATCAGAGGGAGAACCATGAGGGTCGCCGATCTGATATT
TCTGTCCGGTCCGGCCAGCAGCTGCAACCTCGCGATCGCGTTCGGACGTA
AGAATGCGGCCGGCTTCCGCTCCGTTGGAGAGGGGGAAGAAGCGCCTGTC
GCCCTCTGCCAAGAGCAGCAATCATCCTCCTCCTGTTCTCGTGCCGAGCC
TCGCAAACGTTTCGAATACCACTGTGAATGGAATAGGTCGAGCCGAGTTG
GAAGCATGGGCAACGCTGAGCCAAAATACGCGACGATCTCATGAATCGAG
ACCAACGGTAACATTCGGCAGAGCTCGTCCAAACAGCGCCGGGGAACACC
ACTGTCGTTATTCTCGAGAGGGAGGCACACCTGGCCGCGGGCAAACGACC
AGGACGGTTGTCCCCAGAGGAACCGATATGCATATTTCCGATCTTAAACA
GGTCGGCCCCGGCCAGAACTATAATACTGCAGGCACTGTGGTGACTCCAG
CCGAAGCAAACGGAGTGGCGTGGTCGAAGCAGCAACATCAGCGCGCAGCG
CAAGTCTCGTCGATGCCGGTGCCATCGGCTGGAAAATGTAGCTCTGGCTT
TCGCGGGACGGCCGACGGTGCTCACAACCGCCGCAGCAGTTATCATGATC
GACCGGGATGTGATGATGGTTGCGGCCGAACGCTTGTTCGAGATCAACAT
CTTGATGGCCGCAGCATGGGTCGAGCGGAGCGCGACGAGGCTGGCCATCA
GAGGGAGAACCATGAGGGTCGCCGATCTGATATTTCTGTCCGGCTTCTCC
GCGAGCATGCGAAAAAAGCCAGGAAGGAGGAGAAGGCTTTTCTCAGGTCG
ATGAGGGCTGAAGCAAAGGCTAAGGAAGACAGGCTTCTCCGCGAGCATGC
GAAAAAAGCCAGGAAGGAGGAGAAGGCTTTTCTCAGGTCGATGAGGGCTG
AAGCAAAGGCTAAGGAAGACAGCGAGATCGAGATGATACACAGAGCGACT
CAGTGGGCCCGGGATCTGGATAAAAACGTATTGTACTTGCCGCACCGCGT
GGGTGGAAAGTTGCACGTTCTCAAGATCGAGAACGGCTTTGCAGCGGCGA
GACTCGATGAGGGTGAAAGGCGCGGCGGCATGAGATATTTTGAGGAGAAC
GGGAAAGTAATGTCGGTTGACTTCTTCTTGAAGGCAGATCACGCCAGGTA
TGCAAACACATCCCGCATCCCGCGCAAGGTCTGACGAGATCGAGATGATA
CACAGAGCGACTCAGTGGGCCCGGGATCTGGATAAAAACGTATTGTACTT
GCCGCACCGCGTGGGTGGAAAGTTGCACGTTCTCAAGATCGAGAACGGCT
TTGCAGCGGCGAGACTCGATGAGGGTGAAAGGCGCGGCGGCATGAGATAT
TTTGAGGAGAACGGGAAAGTAATGTCGGTTGACTTCTTCTTGAAGGCAGA
TCACGCCAGGTATGCAAACACATCCCGCATCCCGCGCAAGGTCTGA back to top
|