mRNA_L-elsbetiae_contig12159.1798.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12159.1798.1
Unique NamemRNA_L-elsbetiae_contig12159.1798.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 1.900e-160
Identity = 264/295 (89.49%), Postives = 271/295 (91.86%), Query Frame = 1
Query:    1 LPTELLAESFAEKPKEKKKPDKDADEKESAAIAAAKK-KAAERVELLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKAK 882
            LPTELLAESFAEKPKEKK  DKDA EK           K AERVELLD KTLRNTGIAFKRFRMKP DLRDSLVAMDL KFDTDKFIALRNISPSPDDLPTLKGYEGDL KLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFL+EKLGLV +AVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNG+AKAIKLASLLKLDTVKT DKKKTLLHVLM WAKDKEPDLL +D+DLEHASEAS WSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGD+FADVVEPFL+KAK
Sbjct:  741 LPTELLAESFAEKPKEKKPADKDAKEKXXXXXXXXXXXKKAERVELLDGKTLRNTGIAFKRFRMKPHDLRDSLVAMDLDKFDTDKFIALRNISPSPDDLPTLKGYEGDLDKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLSEKLGLVSIAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGEAKAIKLASLLKLDTVKTMDKKKTLLHVLMSWAKDKEPDLLLMDQDLEHASEASHWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDKFADVVEPFLEKAK 1035          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A835Z2Y1_9STRA (FH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.420e-59
Identity = 124/294 (42.18%), Postives = 187/294 (63.61%), Query Frame = 1
Query:    1 LPTELLAESFAEKPKEKKKPDKDADEKESAAIAAAKKKAAERV----ELLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFL 870
            LP E L ++F EKP           E E+AA+ A   KAA +      LLD+KT +N GIA KR RMKP  + + +  M  +   TD  +ALR ++P P  L TL+ Y+G+ ++LDEVT  ++  +K+PRYTAR+D  +F++ +  DA+ +  ++ +V +AV+E ++S  L +++E+VLA+GN+LNEGT  GDAK IKLASLL+L+TVKT D+KKTLLH         +P++L+L+EDLE+  EA+   L +L+QQ+ QL  GF +++ QL+  +   +    DRF +    FL
Sbjct:  554 LPVEKLRDAFEEKPPA---------EGETAAVPAKISKAAAQAAKARSLLDAKTKQNVGIALKRLRMKPAKVIEEIYTMSDRTLTTDNLLALREMAPDPSLLRTLQNYKGEPSELDEVTQLLLAISKVPRYTARMDSTIFIRAYVEDAERIEARVKMVHMAVMEALESKHLPKVLEIVLALGNFLNEGTSKGDAKGIKLASLLQLETVKTLDRKKTLLH--------SQPEVLELEEDLENCKEAATIGLDELQQQINQLRLGFKVVKEQLEFTEEDASAPPNDRFCEAARGFL 830          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.200e-47
Identity = 120/306 (39.22%), Postives = 172/306 (56.21%), Query Frame = 1
Query:    1 LPTELLAESFAEKPKEKKKPDK---DADEKESAAIAAAKKKAAERVELLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDL-AKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKK-------TLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVT-KLEGDRFADVVEPFLDKAK 882
            +P E + E F EKPK  KK      DA     A           R  LLD+K     GI F    + P+ +R+++++MDL   D D    L  + PSP +   L  ++GD+ ++L EV  F+VL   IP Y  RL CA +++ F  +     EK+ +V  A+ +V +S +LKRL+ VVLA+GN+LNEG+ NGDAKAI L SLLK+ TV+   K+         L H +M WA   EP LL L EDL  A++AS+ SL DLK  V  + K   +++A L+ AK     + +GD+F ++VEPFL ++K
Sbjct:  753 IPKEFILEGFQEKPKGPKKVGNVGGDAQGTAPAGXXXXXXXXXXREPLLDAKAALQYGIVFSTVSVSPETVRNAVMSMDLSFLDPDTLEKLEKLLPSPAEQKILTSFKGDIVSELAEVEQFLVLATGIPDYEIRLRCAGYIQAFEPERASALEKITIVSDAISQVTNSAKLKRLLAVVLAVGNFLNEGSSNGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLSLDDLKTNVLAVAKKLGVLEATLEEAKKNTQGRKDGDKFVEIVEPFLARSK 1058          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A835ZCJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.350e-40
Identity = 97/266 (36.47%), Postives = 152/266 (57.14%), Query Frame = 1
Query:  118 AERVELLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLE------------VVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKA 879
            A ++ LLD KTL+N GI   +FRM  +++  ++V MD +K D DK       +P  D++ TLK ++GD  KL +V  F +LT  IPRYT+RL+  +F   F  D   L E L +++ A+ +            V DS  L++L++++LA+GN+LN GT  G A   K+  L K   +K    K+ L+H L  +   ++  L ++ ED  +  EA++  L+      + +TKG +L+Q+QL++AK G     GDRF +V+EPFL KA
Sbjct:  605 AAQINLLDPKTLQNVGITLAKFRMSNNEIVGAVVRMDEEKLDLDK-------APKDDEITTLKDFDGDKEKLGKVEKFFLLTMGIPRYTSRLEAWIFKMSFQHDVALLEETLEILNTAISQASRRTLARPLCIVEDSESLRKLLQLMLAIGNFLNAGTPRGGAFGYKVDVLKKFAELKDITNKRHLMHYLAEFCIKEKAKLCRVSEDFPNFEEATKVPLSQWTSDFSVVTKGCSLLQSQLELAKKGNKAAGGDRFVEVMEPFLQKA 863          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A067D165_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D165_SAPPC)

HSP 1 Score: 145 bits (366), Expect = 2.080e-35
Identity = 83/249 (33.33%), Postives = 139/249 (55.82%), Query Frame = 1
Query:  133 LLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKA 879
            LLDSKT +N GIA  R+++ P +++ +L+A+D     +D   +L  ++P+ ++   LK Y+G +  L  V  F +    IPRYT R+ C  F   F      +  ++  +  A  +V DS RL +++E VLA+GNY+N GT  G A   KL +L KL T+++ D K TL++ L    +  +PDL+    ++ H  EA + SL  +K  +T  T    ++Q Q++ +K   T    D+F +++ PF+ +A
Sbjct:  640 LLDSKTQQNVGIAIARYKLSPAEVKAALLALDTSVLTSDHVTSLITLAPTLEEQDILKNYDGPVEVLGAVEKFFLEMLTIPRYTQRIKCFKFYMQFEHRVLDIQAQIDTLSAATDQVADSTRLTKILETVLAIGNYMNGGTARGGAYGFKLEALGKLHTIRSVDPKVTLMNFLARHLEATQPDLIAFAGEVPHIVEAKRMSLDQVKADITGCTSELAMLQGQVQASKANTTD-PADKFYEIMAPFVKEA 887          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 2.910e-35
Identity = 86/198 (43.43%), Postives = 123/198 (62.12%), Query Frame = 1
Query:  187 MKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGD-LAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKK-------TLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQ 756
            + P+ +R+++++MDL   D D    L  + P P +L  LK +E D +++L EV  F+VL ++IP Y  RL CA  M+ F  D      K+ +V  A+ +V DS +LKRL+ VVLA+GN+LNEGT +GDAKAI L SLLK+ TV+   K+         L H +M WA   EP LL L EDL  A++AS+ +L DLK++
Sbjct:  803 VSPETVRNAVMSMDLSFLDPDTLEKLEKLLPPPAELSILKSFESDDVSELAEVEQFLVLASRIPNYQIRLRCAGDMQAFEPDTASALAKITIVSDAISQVTDSAKLKRLLAVVLAVGNFLNEGTGSGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLALDDLKKE 1000          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A1V9Y825_9STRA (Formin-homology 2 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y825_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.640e-35
Identity = 82/249 (32.93%), Postives = 135/249 (54.22%), Query Frame = 1
Query:  133 LLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKA 879
            LLDSKT +N GIA  R+++   +++ +L+ +D     +D   +L  ++P+ ++   LK Y+G    L  V  F +    IPRYT R+ C  F   F      +  ++  +  A  +V +S RLK+++E VLA+GNY+N GT  G A   KL +L KL T+++ D K TL++ L    +  +PDL+    ++ H  EA + SL  +K  +T  T    ++Q Q+  +K   +    DRF +V+ PF  +A
Sbjct:  331 LLDSKTQQNVGIAIARYKLSAAEVKHALLTLDTNVITSDHITSLITLAPTLEEQDVLKNYDGPADVLGSVEKFFLEMLTIPRYTQRIKCFKFFMQFEHRVLDIQAQIDTLSAATDQVAESTRLKKILETVLAIGNYMNGGTARGGAYGFKLETLAKLHTIRSVDPKVTLMNFLARHLEKTQPDLIAFVGEVPHIVEAKRMSLDQVKADITGCTSELAMLQGQVLASKNDPSPFPEDRFYEVMAPFAKEA 579          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A225WNQ3_9STRA (Formin like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNQ3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.160e-35
Identity = 88/266 (33.08%), Postives = 147/266 (55.26%), Query Frame = 1
Query:  106 KKKAAERVE-------LLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKAK 882
            KKK AE+V        L D K  +N  IA  RF+M  +D+++++ A+D QK  ++    L +ISP+ +++  LK Y+GD   L  V  F +    IPRYT R+ C  +   F +       +L  +  A  +V +S + +R++E +LA+GNYLN  T  G A   KL +L+KL T+K+ D + TL+H L+   ++K PD++    ++ H  EA + SL  L+  ++       +++ Q++ +K     +EGDRF +V+ PF   A+
Sbjct:  590 KKKEAEKVPAQPKEVLLFDPKRQQNVSIAIARFKMSSEDIKNAIYALDGQKLGSEVLNVLISISPTLEEIDLLKNYDGDAKLLGNVEKFFLDLLTIPRYTQRIKCFRYKLQFENRILETQAQLDTLVAATDQVTESDKFRRVLETILAIGNYLNGSTPRGGAYGFKLDTLMKLHTLKSVDPRVTLMHYLLRQLEEKSPDVITFAGEVPHIVEAKRLSLDQLRADLSSYNTELAMLKGQVRASKND--HIEGDRFYEVMTPFAKDAE 853          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: W2PZ34_PHYPN (FH2 domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PZ34_PHYPN)

HSP 1 Score: 143 bits (360), Expect = 7.330e-35
Identity = 88/266 (33.08%), Postives = 148/266 (55.64%), Query Frame = 1
Query:  106 KKKAAERVE-------LLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKAK 882
            KKK AE+V        L D K  +N  IA  RF+M  +D+++++ A+D QK  ++    L +ISP+ +++  LK Y+GD+  L  V  F +    IPRYT R+ C  F   F +       +L  +  A  +V +S + +R++E +LA+GNYLN  T  G A   KL +L+KL T+K+ D + TL+H L+   ++K PD++    ++ H  EA + SL  L+  ++       +++ Q++ +K     +EGD+F +V+ PF   A+
Sbjct:  165 KKKEAEKVPAQPKEVLLFDPKRQQNVSIAIARFKMSSEDIKNAIYALDGQKLGSEVLNVLISISPTLEEIDMLKNYDGDVKLLGNVEKFFLDLLTIPRYTQRIKCFRFKLQFENRILETQAQLDTLVAATDQVTESDKFRRVLEHILAIGNYLNGSTPRGGAYGFKLDTLMKLHTLKSIDPRVTLMHFLLRQLEEKAPDVITFAGEVPHIVEAKRLSLDQLRADLSSYNTELAMLKGQVRASKND--HIEGDKFYEVMTPFAKDAE 428          
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Match: A0A2P4Y8Z5_9STRA (FH2 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8Z5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.060e-34
Identity = 87/266 (32.71%), Postives = 148/266 (55.64%), Query Frame = 1
Query:  106 KKKAAERVE-------LLDSKTLRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPTLKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEKLGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLKLDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLKQQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKAK 882
            KKK AE+V        L D K  +N  IA  RF+M  +D+++++ A+D QK  ++    L +ISP+ +++  LK Y+GD+  L  V  F +    IPRYT R+ C  +   F +       +L  +  A  +V +S + +R++E +LA+GNYLN  T  G A   KL +L+KL T+K+ D + TL+H L+   ++K PD++    ++ H  EA + SL  L+  ++       +++ Q++ +K     +EGD+F +V+ PF   A+
Sbjct:   33 KKKEAEKVPAQPKEVLLFDPKRQQNVSIAIARFKMSSEDIKNAIYALDGQKLGSEVLNVLISISPTLEEIDLLKNYDGDVKLLGNVEKFFLDLLTIPRYTQRIKCFRYKLQFENRILETQAQLDTLVAATDQVAESDKFRRVLEHILAIGNYLNGSTPRGGAYGFKLDTLMKLHTLKSVDPRVTLMHFLLRQLEEKAPDVITFAGEVPHIVEAKRLSLDQLRADLSSYNTELAMLKGQVRASKND--HIEGDKFYEVMTPFAKDAE 296          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12159.1798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPH1_ECTSI1.900e-16089.49Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A835Z2Y1_9STRA1.420e-5942.18FH2 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JDW8_9PHAE1.200e-4739.22FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZCJ0_9STRA3.350e-4036.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067D165_SAPPC2.080e-3533.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
D8LCH4_ECTSI2.910e-3543.43FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1V9Y825_9STRA3.640e-3532.93Formin-homology 2 domain-containing protein (Fragm... [more]
A0A225WNQ3_9STRA5.160e-3533.08Formin like protein n=1 Tax=Phytophthora megakarya... [more]
W2PZ34_PHYPN7.330e-3533.08FH2 domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2P4Y8Z5_9STRA1.060e-3432.71FH2 domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12159contigL-elsbetiae_contig12159:1446..5185 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score494.2
Seed ortholog evalue4.2e-137
Seed eggNOG ortholog2880.D7FPH1
KEGG koko:K04512,ko:K05745,ko:K10293,ko:K11238
KEGG Pathwayko04011,ko04310,ko04810,map04011,map04310,map04810
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005522,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008289,GO:0009987,GO:0010638,GO:0015629,GO:0016020,GO:0016043,GO:0016477,GO:0022607,GO:0030029,GO:0030036,GO:0030041,GO:0030832,GO:0030833,GO:0030838,GO:0030865,GO:0030866,GO:0031254,GO:0031334,GO:0031344,GO:0031345,GO:0032153,GO:0032154,GO:0032155,GO:0032271,GO:0032273,GO:0032535,GO:0032956,GO:0032970,GO:0033043,GO:0034622,GO:0035091,GO:0040011,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0045010,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048870,GO:0050789,GO:0050794,GO:0051015,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051258,GO:0051493,GO:0051495,GO:0051674,GO:0060491,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0097435,GO:0098590,GO:0099568,GO:0110053,GO:0120032,GO:0120033,GO:0120035,GO:1902903,GO:1902905,GO:1904170,GO:1904171
EggNOG free text desc.actin binding
EggNOG OGsKOG1922@1,KOG1922@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04121,ko04147
Ec32 ortholog descriptionFormin-like 1
Ec32 orthologEc-14_004910.1
Exons5
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12159.1798.1prot_L-elsbetiae_contig12159.1798.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12159 1446..5185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815416.554773-CDS-L-elsbetiae_contig12159:1445..15711622815416.554773-CDS-L-elsbetiae_contig12159:1445..1571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 1446..1571 -
1691682887.1965911-CDS-L-elsbetiae_contig12159:1445..15711691682887.1965911-CDS-L-elsbetiae_contig12159:1445..1571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 1446..1571 -
1622815416.5686781-CDS-L-elsbetiae_contig12159:2177..23191622815416.5686781-CDS-L-elsbetiae_contig12159:2177..2319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 2178..2319 -
1691682887.2112918-CDS-L-elsbetiae_contig12159:2177..23191691682887.2112918-CDS-L-elsbetiae_contig12159:2177..2319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 2178..2319 -
1622815416.5811834-CDS-L-elsbetiae_contig12159:3258..35331622815416.5811834-CDS-L-elsbetiae_contig12159:3258..3533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 3259..3533 -
1691682887.2196658-CDS-L-elsbetiae_contig12159:3258..35331691682887.2196658-CDS-L-elsbetiae_contig12159:3258..3533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 3259..3533 -
1622815416.5908525-CDS-L-elsbetiae_contig12159:4087..42411622815416.5908525-CDS-L-elsbetiae_contig12159:4087..4241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 4088..4241 -
1691682887.2286003-CDS-L-elsbetiae_contig12159:4087..42411691682887.2286003-CDS-L-elsbetiae_contig12159:4087..4241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 4088..4241 -
1622815416.5999804-CDS-L-elsbetiae_contig12159:5000..51851622815416.5999804-CDS-L-elsbetiae_contig12159:5000..5185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 5001..5185 -
1691682887.2381628-CDS-L-elsbetiae_contig12159:5000..51851691682887.2381628-CDS-L-elsbetiae_contig12159:5000..5185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12159 5001..5185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12159.1798.1

>prot_L-elsbetiae_contig12159.1798.1 ID=prot_L-elsbetiae_contig12159.1798.1|Name=mRNA_L-elsbetiae_contig12159.1798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
LPTELLAESFAEKPKEKKKPDKDADEKESAAIAAAKKKAAERVELLDSKT
LRNTGIAFKRFRMKPDDLRDSLVAMDLQKFDTDKFIALRNISPSPDDLPT
LKGYEGDLAKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLTEK
LGLVDVAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGDAKAIKLASLLK
LDTVKTQDKKKTLLHVLMGWAKDKEPDLLKLDEDLEHASEASQWSLTDLK
QQVTQLTKGFTLMQAQLKMAKGGVTKLEGDRFADVVEPFLDKAK
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mRNA from alignment at L-elsbetiae_contig12159:1446..5185-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12159.1798.1 ID=mRNA_L-elsbetiae_contig12159.1798.1|Name=mRNA_L-elsbetiae_contig12159.1798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3740bp|location=Sequence derived from alignment at L-elsbetiae_contig12159:1446..5185- (Laminarionema elsbetiae ELsaHSoW15)
CTGCCGACGGAGCTCCTAGCGGAATCGTTCGCGGAAAAGCCGAAGGAGAA GAAGAAGCCGGACAAGGACGCCGACGAGAAGGAGTCGGCGGCCATAGCGG CGGCAAAGAAGAAGGCGGCCGAGCGGGTAGAGCTGCTGGACTCGAAGACG CTGAGGAACACTGGCATCGCCTTCAAGCGGTTCAGGTGTGTGTGTGTGTG TGTGTGTGTGCGTGTGTGCGTGTGTGCGTGCGTGTCTTGTATTTTATTGT ATTGTATTTTTCAGTGTCAACCGCGCCAAGAAAGTACCGTCATCTACATA GCGGGTAAAACACGCGAATTGGTGGGTGTGGGTGTGTAAGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTCTAGGTATGGTGTGGGCTGAGGTAGCTGACA GACAGACGTTGTGTGCATGTTCCGCGCGTGTGGTGTGATGGGTGATGGGT GATGGTGTATGTGATGCATTCGGGTTTGTGGTCTCAGGCCCGTGGCTGGC CTTTCTGCGCCATCACGGCCGTGGGTGCGTGGGTGTACTGCTGTTTAGTA GAGGATGTACGTGGGAGAATTGGTCGTACACATGCGTATGAAAGGAGAAA CGTATTGGCGACCAGAGCAAATGTAGAACACGCCCCCGGCGACACTGGGG GAAAGAAAGTAACTGGCAACGGGCCATCTCATCTCGCCCGAGCGCTCAAC CAAAGGGTTTCGTATTCTCACCCTTGACACAACACTTTGTGCAAGTATTA GTATTTAGAAGAGCACGAAGAGGTGCCGCTGCTCTCGAAGAAGAGCTATA CATGATAGGCCAGGCGACAAAGCCCCTTTCGCCATGACATCCCTCGTCCA GGCGGCTCCCTCCGCCTTACTGGTCTACATACGTACCTCTATAATTTCAC CCCCCCCCCTTCGCATTCGCTACCCACGGGGCCCCTCAAAATAGGATGAA ACCCGATGACCTCCGAGACTCGCTGGTGGCCATGGACCTGCAAAAGTTCG ACACGGACAAGTTCATCGCCCTCCGGAACATCTCCCCCAGCCCAGACGAC CTGCCGACGCTCAAGGGCTACGAAGGCGACCTTGCCAAGCTCGACGAGGT AAGAGACGGCGGGGGTGGGGAGTCAAGAGAAGAGGGGGAAATGGGAGGGA AGGGAGGGAGGGCGGGATGGGGTGTGTTCTCGTTAGTGGTGCGTGCGTGT TCGTTAAAGTCGAAGATTTCGCGTCGCCACGAACCCGGCCTGGCACGCGA CGATAGATCGATATTTATGTAGATAGATAGCACCAGGGGCTAGTGAGCGC TTTTGAGAGGGAGGGGGGGGGGCAGCCAGACAGAAGCTCTCCCTCTCTCT CTCTCTCTGCTTGTGTGTTTCTCGACATTTTTCTTTGTCGTCTTGGCGTT CGCCCATCCAATCCCATCCCGTTCCATTGTATCCCATCTCATCCCCTCCC CTCCCGTCCCGTCCCATCCCACCCGGTCCCACCTCATCCCATGCCGTCCC ATTCCGTTCTATACCATCCCATCCCATTATCATCCCGTCCTGTCCCATCT CATCTCAACCCATCCCATCCCATCCCATCCCCTCCCATCCCATCCCATCC CATCCCATTCCATTCCCCATCCTATCCCTTCCCGTCCCGTCCCGCTGTCC AGGTGACCCTGTTCATGGTCCTGACGGCCAAGATACCCCGCTACACGGCG AGGCTGGACTGCGCCCTGTTTATGAAGGGCTTTTCCAGCGACGCCGACTT TCTCACGGAGAAGCTCGGCCTGGTGGACGTCGCCGTGCTCGAGGTCGTCG ACTCGCCCCGCCTCAAGAGGCTGATCGAGGTAGTGCTGGCGATGGGCAAC TACCTGAACGAGGGCACCAGGAACGGGGACGCGAAGGCGATCAAGCTGGC GTCGCTGCTCAAGCTGGACACCGTCAAGTGAGGAAGGAGGCAGTCGCCCG GTCGGCGGAGGTGGTCTCGGCCGGATTCAGACGGGGGCGTTGGGGAGGCG CTTGGGGGGGGGGGGGGGCACGAGCAAGTAGTTGCCTGTGTGTGTGGGTG TGTGNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGCACGAGCAAGTAGTTGCCTGTGTGTGTGTGTGTGTGTGT GTGTGTCCTTCCCATTTATTTCGGCGACAGCCCCCCCAAGAGGAGACGTG TATTACACCTTGCGGTGTACTTAGTTAGAGGTAATACACTTTGCAGTGCA TTTGTGTGTACAACTAGAACCAACCGGGGTCACACAGGAGGGGGTGAACA CTCGGGTTTTTTCTTCTTTATTTTCTTTTTTTGCCCCACCTTCATGTACA TGCTATTCATGTACCTATGCCGGATTTTGCTGGATTTTTGTGCGCAGAGT TTGCCAGCAGGACCATCAGGCGTGAAACTGCGGCATATGTGCCGTGTTTT TTTATTGTAATTTATGCACGTCTTTTCGGCAGACTATCCTGGTTTCGTTT TTTTTTTCGTCTTCTTTTGCGCGTCTCCTCTCTGGCTAATTTCTTGTTTT TGGTCGTGGCACGACGAAATGAATGTTTTGCATGGATGGGGGGTAGGGAA GAGGTACATACATATACGTACTACCCAAATTAGCAGCTCCGCAGCGTATG TATGTAGCACAAGAAGCATCAACGATGTTCCCAAGGGCCGCTGCTGATGT AGCTCCTGCTTCGTTTTCTGCTGCTGCTGCTGCTCTGCTGCTGCTGCTCT GCTGCTGCAACTCTTGTTTCTACCGGGGGTGTCGTGTTTCTGTCACGGGG GGGTGGGGGCGCGCAGGACGCAAGACAAGAAGAAGACCTTGCTGCACGTG CTCATGGGCTGGGCCAAGGACAAGGAGCCTGATCTGCTCAAACTGGACGA GGATCTGGAGCATGCGTCGGAAGCTTCGCAGTGGAGCCTCACCGACCTCA AGCAGCAGGTGCGGCGGCGCTCGTTGCCTGTTAAATCTAGGGGGGGGTTG ATGGAGTCGTCGAGAGTGGCTTGAGGCACGGCATTGATTGGTTTGTAGAT ATGTACCATAAATAAATATGATTCAAGTTTTAGTTTCACATAAATATACT GCTGTGTTGTAGATATGTAGATGCAACGAAGGATGAGCCGGTTTAGCGTG CTTGCTTGGCTTGAGCTTGTTTGTTGCCCCTGGTGATGCGCAGAAGTTGA ATGGTATGTATGTTTGTAGGGAGCACTCAATCCTGTGAAATGTGACGATA CATCTCTGTCGGTGTTGTCCATGCTGCTGCCGCCGCTATCGCGTATGCGG CTGTTGCTTTTGCTCCTGTTGTGCGTGCATGGCTCTGCTTACGGTTCCAA GTGCTGTTCGGGTTTTTGTGAGAGTTTGACTGCTCGTCTCTTCTCTGCTG CTGCTGCTGCTGCTGCCGCTGCTGCTGCCGCCGCAGCCTCTCACGACCAT GCTTCAAACAGACATTTGGTTCTTTTATTTCGCTGAGGTGTACCCCCTTC TCTGCATTGTTGCCCGTTGTTTATGCTGCCACTGTTGCTGCTGCTGCTGC TGCTGCTGCTGCAGGTGACCCAACTCACCAAGGGCTTCACGCTGATGCAG GCTCAGCTCAAGATGGCGAAGGGGGGAGTCACCAAGCTCGAGGGCGACAG GTTCGCGGACGTCGTGGAGCCGTTCCTAGACAAAGCAAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12159:1446..5185-

>mRNA_L-elsbetiae_contig12159.1798.1 ID=mRNA_L-elsbetiae_contig12159.1798.1|Name=mRNA_L-elsbetiae_contig12159.1798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig12159:1446..5185- (Laminarionema elsbetiae ELsaHSoW15)
CTGCCGACGGAGCTCCTAGCGGAATCGTTCGCGGAAAAGCCGAAGGAGAA
GAAGAAGCCGGACAAGGACGCCGACGAGAAGGAGTCGGCGGCCATAGCGG
CGGCAAAGAAGAAGGCGGCCGAGCGGGTAGAGCTGCTGGACTCGAAGACG
CTGAGGAACACTGGCATCGCCTTCAAGCGGTTCAGCTGCCGACGGAGCTC
CTAGCGGAATCGTTCGCGGAAAAGCCGAAGGAGAAGAAGAAGCCGGACAA
GGACGCCGACGAGAAGGAGTCGGCGGCCATAGCGGCGGCAAAGAAGAAGG
CGGCCGAGCGGGTAGAGCTGCTGGACTCGAAGACGCTGAGGAACACTGGC
ATCGCCTTCAAGCGGTTCAGGATGAAACCCGATGACCTCCGAGACTCGCT
GGTGGCCATGGACCTGCAAAAGTTCGACACGGACAAGTTCATCGCCCTCC
GGAACATCTCCCCCAGCCCAGACGACCTGCCGACGCTCAAGGGCTACGAA
GGCGACCTTGCCAAGCTCGACGAGGATGAAACCCGATGACCTCCGAGACT
CGCTGGTGGCCATGGACCTGCAAAAGTTCGACACGGACAAGTTCATCGCC
CTCCGGAACATCTCCCCCAGCCCAGACGACCTGCCGACGCTCAAGGGCTA
CGAAGGCGACCTTGCCAAGCTCGACGAGGTGACCCTGTTCATGGTCCTGA
CGGCCAAGATACCCCGCTACACGGCGAGGCTGGACTGCGCCCTGTTTATG
AAGGGCTTTTCCAGCGACGCCGACTTTCTCACGGAGAAGCTCGGCCTGGT
GGACGTCGCCGTGCTCGAGGTCGTCGACTCGCCCCGCCTCAAGAGGCTGA
TCGAGGTAGTGCTGGCGATGGGCAACTACCTGAACGAGGGCACCAGGAAC
GGGGACGCGAAGGCGATCAAGCTGGCGTCGCTGCTCAAGCTGGACACCGT
CAAGTGACCCTGTTCATGGTCCTGACGGCCAAGATACCCCGCTACACGGC
GAGGCTGGACTGCGCCCTGTTTATGAAGGGCTTTTCCAGCGACGCCGACT
TTCTCACGGAGAAGCTCGGCCTGGTGGACGTCGCCGTGCTCGAGGTCGTC
GACTCGCCCCGCCTCAAGAGGCTGATCGAGGTAGTGCTGGCGATGGGCAA
CTACCTGAACGAGGGCACCAGGAACGGGGACGCGAAGGCGATCAAGCTGG
CGTCGCTGCTCAAGCTGGACACCGTCAAGACGCAAGACAAGAAGAAGACC
TTGCTGCACGTGCTCATGGGCTGGGCCAAGGACAAGGAGCCTGATCTGCT
CAAACTGGACGAGGATCTGGAGCATGCGTCGGAAGCTTCGCAGTGGAGCC
TCACCGACCTCAAGCAGCAGGACGCAAGACAAGAAGAAGACCTTGCTGCA
CGTGCTCATGGGCTGGGCCAAGGACAAGGAGCCTGATCTGCTCAAACTGG
ACGAGGATCTGGAGCATGCGTCGGAAGCTTCGCAGTGGAGCCTCACCGAC
CTCAAGCAGCAGGTGACCCAACTCACCAAGGGCTTCACGCTGATGCAGGC
TCAGCTCAAGATGGCGAAGGGGGGAGTCACCAAGCTCGAGGGCGACAGGT
TCGCGGACGTCGTGGAGCCGTTCCTAGACAAAGCAAAGGTGACCCAACTC
ACCAAGGGCTTCACGCTGATGCAGGCTCAGCTCAAGATGGCGAAGGGGGG
AGTCACCAAGCTCGAGGGCGACAGGTTCGCGGACGTCGTGGAGCCGTTCC
TAGACAAAGCAAAG
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