mRNA_L-elsbetiae_contig1215.1789.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A6G0WDL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDL0_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.770e-37 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 21 YDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELP 311 Y H HE+VR+YGALTLAQGW+V+KTR VGDGLIR+ C+A+CL + LQA+A+LRAQ++SPESH++LN + + L YGY +FKTIK FELP Sbjct: 43 YSHLVHEMVRLYGALTLAQGWLVWKTRLVGDGLIRKTFCQAYCLCFSLQAIAMLRAQISSPESHSVLNWINILVLAGLGGAYGYFLFFKTIKAFELP 139
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A836CB09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB09_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.090e-37 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 3 Query: 3 TLFGQSYDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPGARGQS 329 TL+G H HE+VRMYGALTLAQGW+ TR GD ++RA+ EA+ ++YGLQ +AL RAQ SP+SHT LN+ G A F++L+AFY Y RW +TIK+FELP + +S Sbjct: 47 TLYGGELTHHLHEVVRMYGALTLAQGWLTHATRQAGDARVKRAMSEAYAVSYGLQMLALARAQWTSPDSHTALNIAGIALFASLSAFYAYVRWRRTIKIFELPTEQVKS 155
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A397DN74_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DN74_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.450e-36 Identity = 60/103 (58.25%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 3 TLFGQSYDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELP 311 L G Y H HE+VR+YGALTLAQGW+V+KTR VGDGL+R+ C+A+CL + LQA+AL+RAQ++SPESH++LN + + L YGY FKTIK FELP Sbjct: 37 VLGGSEYGHLVHEVVRLYGALTLAQGWLVWKTRLVGDGLVRKTFCQAYCLCFTLQALALVRAQVSSPESHSVLNWINIIVLAGLGTAYGYFIVFKTIKAFELP 139
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A067D0E8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0E8_SAPPC) HSP 1 Score: 129 bits (323), Expect = 4.940e-36 Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 21 YDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPGARG 323 Y H HE+VR+YGALTLAQGW+V+KTR VGD LIR+ C+A+CL + LQ++A+ RAQ+ASPESH+LLN + + L A YGY FKT K FELP +G Sbjct: 43 YGHLVHEMVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFSLQSLAMFRAQVASPESHSLLNWINILVLAGLGAAYGYFLAFKTAKAFELPSMKG 143
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A024TE78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TE78_9STRA) HSP 1 Score: 129 bits (323), Expect = 7.240e-36 Identity = 62/103 (60.19%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 3 TLFGQSYDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELP 311 L Y H HE+VR+YGALTLAQGW+V+KTR VGD LIR+ C+A+CL + LQA AL+RAQ++SPESH++LN V + L A YGY FKTIKVFELP Sbjct: 56 ALGASEYGHLVHEVVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFLLQAAALVRAQVSSPESHSVLNWVNIIVLAALGAAYGYFVVFKTIKVFELP 158
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A485KNP7_9STRA (Aste57867_9606 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNP7_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.220e-35 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 21 YDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELP 311 Y H HE+VR+YGALTLAQGW+V+ TR VGDGLIR+ C+A+CL + LQA+A+LRAQ++SPESH++LN + + L YGY FKTIK FELP Sbjct: 46 YSHLAHEMVRLYGALTLAQGWLVWNTRLVGDGLIRKTFCQAYCLCFSLQALAMLRAQVSSPESHSVLNWLNIFILAGLGIAYGYFLAFKTIKAFELP 142
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: K3XC85_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XC85_GLOUD) HSP 1 Score: 124 bits (311), Expect = 3.470e-34 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 27 HFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPGARGQSL 332 HF HE VR+YGALTLAQGW+V++TR V D LIRR C+A+C+ + LQA+AL+RAQL++PE+H+ L+ + L YGY FKTIK FELPGA+ + L Sbjct: 45 HFAHEFVRLYGALTLAQGWLVWRTRLVSDALIRRTFCQAYCICFSLQALALVRAQLSAPENHSSLHWLNILVLGGLGGAYGYFLVFKTIKAFELPGAQSKGL 146
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: G4YMX6_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YMX6_PHYSP) HSP 1 Score: 124 bits (311), Expect = 3.470e-34 Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 27 HFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPG 314 H HE VR+YGALTLAQGW+V++TR V D LIRR C+A+C+ + LQAVALLRAQLASPESH++L+ V L YGY FKTIK FELPG Sbjct: 46 HLAHEFVRLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQLASPESHSMLHWVNILLLGGLGCAYGYFLVFKTIKAFELPG 141
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: A0A1V9ZH25_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZH25_9STRA) HSP 1 Score: 123 bits (309), Expect = 6.780e-34 Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 21 YDHFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPGARGQS 329 Y H HE+VR+YGALT AQGW+V+KTR V D ++R+ C+A+CL + LQ++A+LRAQ++SPESH++LN + + L A YGY FKT+K FELP + S Sbjct: 43 YGHLVHEMVRLYGALTAAQGWLVWKTRLVSDPIVRKTFCQAYCLCFSLQSLAMLRAQVSSPESHSMLNWINILVLAGLGAAYGYFLLFKTVKAFELPSMKSTS 145
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Match: W2G8X2_PHYPR (Uncharacterized protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=W2G8X2_PHYPR) HSP 1 Score: 123 bits (308), Expect = 9.620e-34 Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 27 HFQHELVRMYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASPESHTLLNLVGCAAFSTLAAFYGYCRWFKTIKVFELPG 314 H HE VR+YGALTLAQGW+V++TR V D LIRR C+A+C+ + LQAVALLRAQ+ASPESH++L+ + L YGY FKTIK FELPG Sbjct: 45 HMAHEFVRLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQIASPESHSMLHWINILLLGGLGCAYGYFLVFKTIKAFELPG 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1215.1789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1215.1789.1 >prot_L-elsbetiae_contig1215.1789.1 ID=prot_L-elsbetiae_contig1215.1789.1|Name=mRNA_L-elsbetiae_contig1215.1789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MYGALTLAQGWVVFKTRTVGDGLIRRAICEAFCLAYGLQAVALLRAQLASback to top mRNA from alignment at L-elsbetiae_contig1215:13521..15369- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1215.1789.1 ID=mRNA_L-elsbetiae_contig1215.1789.1|Name=mRNA_L-elsbetiae_contig1215.1789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1849bp|location=Sequence derived from alignment at L-elsbetiae_contig1215:13521..15369- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1215:13521..15369- >mRNA_L-elsbetiae_contig1215.1789.1 ID=mRNA_L-elsbetiae_contig1215.1789.1|Name=mRNA_L-elsbetiae_contig1215.1789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig1215:13521..15369- (Laminarionema elsbetiae ELsaHSoW15)back to top |