mRNA_L-elsbetiae_contig12130.1780.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: D7FH34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH34_ECTSI) HSP 1 Score: 322 bits (824), Expect = 1.100e-110 Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 1 Query: 1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREVR 492 I++TEDK EASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMED+SKPRR SSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRP ESIRQEMVELAAAGYREVR Sbjct: 25 IQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMVELAAAGYREVR 188
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE) HSP 1 Score: 320 bits (819), Expect = 5.860e-103 Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 1 Query: 1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 I++TEDK EASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMED+SKPRR SSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRP ESIRQEMVELAAAGYREV Sbjct: 321 IQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMVELAAAGYREV 483
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.410e-89 Identity = 132/163 (80.98%), Postives = 148/163 (90.80%), Query Frame = 1 Query: 1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 + + E K A+V VLNTC+IRDHAEQKVYSYVGP+A RK KG+++AIVVAGCVAQQEGEKLLRR+PEIDLVMGPQYANRLGDLLEDVMNGNQ+VATDPSLIMEDIS+P+R+S CAWVNIIYGCNEHCTYCVVPG RGVEQSRP ESIR E+ +LAA GYRE+ Sbjct: 95 LRKAEKKETANVIVLNTCTIRDHAEQKVYSYVGPHARRKHKGDDVAIVVAGCVAQQEGEKLLRRIPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISRPKRSSDICAWVNIIYGCNEHCTYCVVPGTRGVEQSRPKESIRAEVEDLAARGYREI 257
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK) HSP 1 Score: 273 bits (699), Expect = 5.280e-87 Identity = 128/158 (81.01%), Postives = 146/158 (92.41%), Query Frame = 1 Query: 16 DKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 D A+ VFV+NTCSIRDHAEQKVY+ +G A RK +GE++AIVVAGCVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV+NGNQ+VATDP+LIMED+SKPRR S+TCAWVN+IYGCNEHCTYCVVPG RGVEQSRP ESIR+E+ ELAAAGYRE+ Sbjct: 140 DPAKTDVFVVNTCSIRDHAEQKVYAAIGKQAQRKHRGESVAIVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVVNGNQVVATDPTLIMEDVSKPRRGSATCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPKESIRREIEELAAAGYREI 297
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA) HSP 1 Score: 268 bits (684), Expect = 8.950e-84 Identity = 124/159 (77.99%), Postives = 145/159 (91.19%), Query Frame = 1 Query: 13 EDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 E++ +A+V VLNTCSIRDHAEQKVYSY+GP+A RK++GE +AIVVAGCVAQQEGE+LLRRVPE+DLVMGPQY+NR+GDLLEDVMNGNQ+VATDP IMED++KPRR S+ CAWVN+IYGCNEHCTYCVVPG RGVEQSRP E+IRQE+ +L GYREV Sbjct: 230 EERLKANVIVLNTCSIRDHAEQKVYSYLGPHANRKRRGEPVAIVVAGCVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDVMNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPREAIRQEVEDLVKQGYREV 388
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A8J5X4V1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4V1_DIALT) HSP 1 Score: 261 bits (666), Expect = 1.160e-80 Identity = 119/157 (75.80%), Postives = 141/157 (89.81%), Query Frame = 1 Query: 19 KAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 + +A + V+NTCSIRDHAEQK+YS +GPYAIRK+ GE +AIVVAGCVAQQEG +LLRRVPE+D+VMGPQY+NRLGDLLED +NGNQ+VAT+P+ IMED++KPRR S CAWVN+IYGCNE CTYCVVPG RGVEQSRP+ESIR+EM ELAA GY+EV Sbjct: 285 QGKADIVVINTCSIRDHAEQKLYSLLGPYAIRKRSGEPVAIVVAGCVAQQEGARLLRRVPEVDVVMGPQYSNRLGDLLEDALNGNQVVATEPTYIMEDVTKPRRGSGVCAWVNVIYGCNERCTYCVVPGTRGVEQSRPVESIRKEMEELAAVGYKEV 441
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: L1ITN0_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1ITN0_GUITC) HSP 1 Score: 251 bits (642), Expect = 9.470e-80 Identity = 117/161 (72.67%), Postives = 139/161 (86.34%), Query Frame = 1 Query: 7 RTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 + ED ++A+V + NTCSIRDHAEQKVYSY+GP A RK+ GEN+A++VAGCVAQQEGEKLLRRVPE+D+VMGPQYANR+GDLLEDV+NGNQ+VAT+ + +MED ++PRR S AWVN+IYGCNE CTYCVVP RGVEQSRP ESIR+EM EL GYREV Sbjct: 24 KVEDPSKANVVIYNTCSIRDHAEQKVYSYIGPQADRKRNGENVALIVAGCVAQQEGEKLLRRVPELDMVMGPQYANRIGDLLEDVVNGNQVVATEAAPMMEDSTRPRRESEVTAWVNVIYGCNERCTYCVVPTTRGVEQSRPKESIRKEMEELGRKGYREV 184
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S3PWX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWX7_9STRA) HSP 1 Score: 247 bits (631), Expect = 3.820e-79 Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 40 VLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 VLNTCSIRDHAEQKVYSY+GPYA RK++GE++ I+VAGCVAQQEGE LLRR PE+DLV+GPQYANRLGDLLEDV NGNQ+VAT+ S IMED +KPRR S+T AWVN+IYGCNE CTYC+VP RGVEQSRPMESI +E+ EL + GY+EV Sbjct: 180 VLNTCSIRDHAEQKVYSYIGPYAKRKREGEDVTIIVAGCVAQQEGENLLRRAPEVDLVLGPQYANRLGDLLEDVANGNQVVATEASHIMEDSTKPRRQSTTAAWVNVIYGCNERCTYCIVPTTRGVEQSRPMESIVEEVTELISQGYKEV 329
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC) HSP 1 Score: 254 bits (649), Expect = 2.940e-78 Identity = 119/160 (74.38%), Postives = 139/160 (86.88%), Query Frame = 1 Query: 10 TEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 T+D A + VLNTCSIRD AEQKVYS +GP+A RK+ G+++ +VVAGCVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV NGNQ+VAT+P+ IMED +KPRR SS AWVN+IYGCNEHCTYCVVP RGVEQSRPMES+R+EM EL A G++EV Sbjct: 226 TDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRSGKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVANGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNTRGVEQSRPMESVRREMEELGALGFKEV 385
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A0G4HEZ9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HEZ9_9ALVE) HSP 1 Score: 253 bits (647), Expect = 1.140e-77 Identity = 124/162 (76.54%), Postives = 136/162 (83.95%), Query Frame = 1 Query: 4 ERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489 E TE + EA V VLNTCSIRD AEQKVYS +GPYA RK+ GE++A+VVAGCVAQQE E LLRRVPE+DLVMGPQYANRLGDLLE V GNQ+VATDP+ IMEDI++ RR S CAWVNIIYGCNEHCTYCVVP RGVEQSRP ESI QE+ EL A GYREV Sbjct: 268 EETEKQGEADVVVLNTCSIRDRAEQKVYSQLGPYAARKRSGEDVALVVAGCVAQQEAESLLRRVPEVDLVMGPQYANRLGDLLEHVGRGNQVVATDPAYIMEDITQARRDSDVCAWVNIIYGCNEHCTYCVVPTTRGVEQSRPSESILQEIRELGARGYREV 429 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12130.1780.1 >prot_L-elsbetiae_contig12130.1780.1 ID=prot_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAback to top mRNA from alignment at L-elsbetiae_contig12130:668..2271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12130.1780.1 ID=mRNA_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1604bp|location=Sequence derived from alignment at L-elsbetiae_contig12130:668..2271+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12130:668..2271+ >mRNA_L-elsbetiae_contig12130.1780.1 ID=mRNA_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig12130:668..2271+ (Laminarionema elsbetiae ELsaHSoW15)back to top |