mRNA_L-elsbetiae_contig12130.1780.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12130.1780.1
Unique NamemRNA_L-elsbetiae_contig12130.1780.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: D7FH34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH34_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 1.100e-110
Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 1
Query:    1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREVR 492
            I++TEDK EASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMED+SKPRR SSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRP ESIRQEMVELAAAGYREVR
Sbjct:   25 IQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMVELAAAGYREVR 188          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 5.860e-103
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 1
Query:    1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            I++TEDK EASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMED+SKPRR SSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRP ESIRQEMVELAAAGYREV
Sbjct:  321 IQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPKESIRQEMVELAAAGYREV 483          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.410e-89
Identity = 132/163 (80.98%), Postives = 148/163 (90.80%), Query Frame = 1
Query:    1 IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            + + E K  A+V VLNTC+IRDHAEQKVYSYVGP+A RK KG+++AIVVAGCVAQQEGEKLLRR+PEIDLVMGPQYANRLGDLLEDVMNGNQ+VATDPSLIMEDIS+P+R+S  CAWVNIIYGCNEHCTYCVVPG RGVEQSRP ESIR E+ +LAA GYRE+
Sbjct:   95 LRKAEKKETANVIVLNTCTIRDHAEQKVYSYVGPHARRKHKGDDVAIVVAGCVAQQEGEKLLRRIPEIDLVMGPQYANRLGDLLEDVMNGNQVVATDPSLIMEDISRPKRSSDICAWVNIIYGCNEHCTYCVVPGTRGVEQSRPKESIRAEVEDLAARGYREI 257          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK)

HSP 1 Score: 273 bits (699), Expect = 5.280e-87
Identity = 128/158 (81.01%), Postives = 146/158 (92.41%), Query Frame = 1
Query:   16 DKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            D A+  VFV+NTCSIRDHAEQKVY+ +G  A RK +GE++AIVVAGCVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV+NGNQ+VATDP+LIMED+SKPRR S+TCAWVN+IYGCNEHCTYCVVPG RGVEQSRP ESIR+E+ ELAAAGYRE+
Sbjct:  140 DPAKTDVFVVNTCSIRDHAEQKVYAAIGKQAQRKHRGESVAIVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVVNGNQVVATDPTLIMEDVSKPRRGSATCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPKESIRREIEELAAAGYREI 297          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA)

HSP 1 Score: 268 bits (684), Expect = 8.950e-84
Identity = 124/159 (77.99%), Postives = 145/159 (91.19%), Query Frame = 1
Query:   13 EDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            E++ +A+V VLNTCSIRDHAEQKVYSY+GP+A RK++GE +AIVVAGCVAQQEGE+LLRRVPE+DLVMGPQY+NR+GDLLEDVMNGNQ+VATDP  IMED++KPRR S+ CAWVN+IYGCNEHCTYCVVPG RGVEQSRP E+IRQE+ +L   GYREV
Sbjct:  230 EERLKANVIVLNTCSIRDHAEQKVYSYLGPHANRKRRGEPVAIVVAGCVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDVMNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGTRGVEQSRPREAIRQEVEDLVKQGYREV 388          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A8J5X4V1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4V1_DIALT)

HSP 1 Score: 261 bits (666), Expect = 1.160e-80
Identity = 119/157 (75.80%), Postives = 141/157 (89.81%), Query Frame = 1
Query:   19 KAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            + +A + V+NTCSIRDHAEQK+YS +GPYAIRK+ GE +AIVVAGCVAQQEG +LLRRVPE+D+VMGPQY+NRLGDLLED +NGNQ+VAT+P+ IMED++KPRR S  CAWVN+IYGCNE CTYCVVPG RGVEQSRP+ESIR+EM ELAA GY+EV
Sbjct:  285 QGKADIVVINTCSIRDHAEQKLYSLLGPYAIRKRSGEPVAIVVAGCVAQQEGARLLRRVPEVDVVMGPQYSNRLGDLLEDALNGNQVVATEPTYIMEDVTKPRRGSGVCAWVNVIYGCNERCTYCVVPGTRGVEQSRPVESIRKEMEELAAVGYKEV 441          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: L1ITN0_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1ITN0_GUITC)

HSP 1 Score: 251 bits (642), Expect = 9.470e-80
Identity = 117/161 (72.67%), Postives = 139/161 (86.34%), Query Frame = 1
Query:    7 RTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            + ED ++A+V + NTCSIRDHAEQKVYSY+GP A RK+ GEN+A++VAGCVAQQEGEKLLRRVPE+D+VMGPQYANR+GDLLEDV+NGNQ+VAT+ + +MED ++PRR S   AWVN+IYGCNE CTYCVVP  RGVEQSRP ESIR+EM EL   GYREV
Sbjct:   24 KVEDPSKANVVIYNTCSIRDHAEQKVYSYIGPQADRKRNGENVALIVAGCVAQQEGEKLLRRVPELDMVMGPQYANRIGDLLEDVVNGNQVVATEAAPMMEDSTRPRRESEVTAWVNVIYGCNERCTYCVVPTTRGVEQSRPKESIRKEMEELGRKGYREV 184          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A7S3PWX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWX7_9STRA)

HSP 1 Score: 247 bits (631), Expect = 3.820e-79
Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 1
Query:   40 VLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            VLNTCSIRDHAEQKVYSY+GPYA RK++GE++ I+VAGCVAQQEGE LLRR PE+DLV+GPQYANRLGDLLEDV NGNQ+VAT+ S IMED +KPRR S+T AWVN+IYGCNE CTYC+VP  RGVEQSRPMESI +E+ EL + GY+EV
Sbjct:  180 VLNTCSIRDHAEQKVYSYIGPYAKRKREGEDVTIIVAGCVAQQEGENLLRRAPEVDLVLGPQYANRLGDLLEDVANGNQVVATEASHIMEDSTKPRRQSTTAAWVNVIYGCNERCTYCIVPTTRGVEQSRPMESIVEEVTELISQGYKEV 329          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 254 bits (649), Expect = 2.940e-78
Identity = 119/160 (74.38%), Postives = 139/160 (86.88%), Query Frame = 1
Query:   10 TEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            T+D   A + VLNTCSIRD AEQKVYS +GP+A RK+ G+++ +VVAGCVAQQEGE+LLRRVPE+DLVMGPQYANRLGDLLEDV NGNQ+VAT+P+ IMED +KPRR SS  AWVN+IYGCNEHCTYCVVP  RGVEQSRPMES+R+EM EL A G++EV
Sbjct:  226 TDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRSGKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVANGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNTRGVEQSRPMESVRREMEELGALGFKEV 385          
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Match: A0A0G4HEZ9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HEZ9_9ALVE)

HSP 1 Score: 253 bits (647), Expect = 1.140e-77
Identity = 124/162 (76.54%), Postives = 136/162 (83.95%), Query Frame = 1
Query:    4 ERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSLIMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQEMVELAAAGYREV 489
            E TE + EA V VLNTCSIRD AEQKVYS +GPYA RK+ GE++A+VVAGCVAQQE E LLRRVPE+DLVMGPQYANRLGDLLE V  GNQ+VATDP+ IMEDI++ RR S  CAWVNIIYGCNEHCTYCVVP  RGVEQSRP ESI QE+ EL A GYREV
Sbjct:  268 EETEKQGEADVVVLNTCSIRDRAEQKVYSQLGPYAARKRSGEDVALVVAGCVAQQEAESLLRRVPEVDLVMGPQYANRLGDLLEHVGRGNQVVATDPAYIMEDITQARRDSDVCAWVNIIYGCNEHCTYCVVPTTRGVEQSRPSESILQEIRELGARGYREV 429          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12130.1780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH34_ECTSI1.100e-11096.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNX7_9PHAE5.860e-10396.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXD9_9STRA1.410e-8980.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DL29_HETAK5.280e-8781.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S7D0_9STRA8.950e-8477.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5X4V1_DIALT1.160e-8075.80Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
L1ITN0_GUITC9.470e-8072.67Uncharacterized protein n=3 Tax=Guillardia theta T... [more]
A0A7S3PWX7_9STRA3.820e-7976.67Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A0G4ERE5_VITBC2.940e-7874.38Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4HEZ9_9ALVE1.140e-7776.54Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12130contigL-elsbetiae_contig12130:668..2271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.2
Seed ortholog evalue7.3e-86
Seed eggNOG ortholog2880.D7FH34
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N6-isopentenyladenosine methylthiotransferase activity
EggNOG OGsCOG0621@1,KOG2492@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionMethylthiotransferase, N-terminal
Ec32 orthologEc-00_000160.1
Exons3
Model size501
Cds size501
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12130.1780.1prot_L-elsbetiae_contig12130.1780.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12130 668..2271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815412.1408587-CDS-L-elsbetiae_contig12130:667..8191622815412.1408587-CDS-L-elsbetiae_contig12130:667..819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 668..819 +
1691682886.3563979-CDS-L-elsbetiae_contig12130:667..8191691682886.3563979-CDS-L-elsbetiae_contig12130:667..819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 668..819 +
1622815412.1552598-CDS-L-elsbetiae_contig12130:1217..13411622815412.1552598-CDS-L-elsbetiae_contig12130:1217..1341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 1218..1341 +
1691682886.3692997-CDS-L-elsbetiae_contig12130:1217..13411691682886.3692997-CDS-L-elsbetiae_contig12130:1217..1341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 1218..1341 +
1622815412.164975-CDS-L-elsbetiae_contig12130:2046..22711622815412.164975-CDS-L-elsbetiae_contig12130:2046..2271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 2047..2271 +
1691682886.3783832-CDS-L-elsbetiae_contig12130:2046..22711691682886.3783832-CDS-L-elsbetiae_contig12130:2046..2271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12130 2047..2271 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12130.1780.1

>prot_L-elsbetiae_contig12130.1780.1 ID=prot_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
IERTEDKAEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQKGENIAIVVA
GCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDVMNGNQIVATDPSL
IMEDISKPRRASSTCAWVNIIYGCNEHCTYCVVPGVRGVEQSRPMESIRQ
EMVELAAAGYREVREA*
back to top

mRNA from alignment at L-elsbetiae_contig12130:668..2271+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12130.1780.1 ID=mRNA_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1604bp|location=Sequence derived from alignment at L-elsbetiae_contig12130:668..2271+ (Laminarionema elsbetiae ELsaHSoW15)
ATTGAGAGGACGGAAGACAAGGCAGAGGCCAGCGTTTTCGTGCTCAACAC GTGCTCCATCCGTGACCACGCGGAGCAGAAGGTTTACTCCTACGTCGGGC CGTACGCGATCCGCAAGCAGAAGGGCGAGAACATCGCCATTGTGGTAGCC GGGTAAGGGCGGGTGTGCTCACTTTACTGCTCACGGCGGTGTGTTTCGCT GCAACTGCTGCAGGCTTCGGTGGCAGAGGAGGCAGGCAGCGGCAGGCCGA GACAGGTTGCTGGTGGTTGTGCATTGCTGCACGCTGCAGTTGTTTGTGTC GTGTACTATTAGCTCATGGTGTGTTTCGGTGCAACTGCCGCAGGCTTTGG CGGCCGAGGAGGCAGGCGGGGGGGCAGACAGACAGTGGCGGGCCGAGACA TATGTTGCCGGTTGTTGTGCGTTGCTGCGCGCTGCAGTTGTTGTGTCGTG TGACGTCTTGGTTTGCTTGCTGCCCAAACCAACACACTCGCCAAATAAAC AAGGCAACAACGACGCGCGCTCTGCGTCCCGTCTTTGCCTCCCCTCGTAG ATGCGTCGCCCAGCAGGAGGGGGAGAAGCTTCTCCGCAGGGTGCCCGAGA TCGACCTCGTCATGGGCCCGCAGTACGCCAACCGCCTGGGGGACCTCCTG GAGGACGTCATGAACGGAAACCAGGTGATTTCACGGTGCCCCCCCCCCCC CCCGGTCGTCCTCTGTACGGCGGTGCCGAGCAGAGATGGATTGGAACGGT TTGTCACCATGAAGATGTCATCAACAGCAGCAGCAGCAGCAGCAGCAGCA GCAGAGCAGCAGCAAATTATCGAAAGGCCTGCTGCGGGGTAGTTTCATTT CAGAGTCCGCACTATTTTCTCTCCTGGAAAAGTGCTTGGCCAAAAAGTGG CAACCTAGTTGCTCTTTGGTTCGCTCCATAACGCCTGCTGTTTGAGCAGG GTGATAACGGCGATTTTCTTTTTTTCGAACGTATATTGACTCGCTCGTTG CGCCTCTGCTGCTGGTATTTTAGTGCGTCTACTGCTGCTGTCGTTGCTGG TGCTGCTTCGCGTTTGGTGTTCGTGCGCATATGTATGTAGTGCAAGAATA ACCCTTCGTGTGCACTCCCAGTTTTACACGACGGCCCCCGCACCATGGGA AAGAGAAACGTCGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGGCGTGGCCTCTAGTCTGGCTCCGCTTTTTCGAAGGCGAC AACAAATGAGGACCCCCCCCCGCCCCCGCTACCCTTGCCCGTGCCTCGCC GCTGCCCCGGCTCCAACCAATCAAAGTACAGCCACCCGCAACGTTTATCC CCTTCCCTCCCTTCCCTTCCCTTCCTCAGATCGTGGCGACGGACCCGTCC CTGATCATGGAGGATATCTCCAAGCCCCGCCGCGCCAGCTCCACGTGCGC CTGGGTCAACATCATTTATGGCTGCAACGAGCACTGCACTTACTGCGTCG TGCCCGGCGTGCGGGGCGTGGAGCAGAGCCGGCCCATGGAATCCATCCGG CAGGAGATGGTGGAGCTCGCCGCCGCGGGCTACCGGGAGGTGCGTGAGGC GTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig12130:668..2271+

>mRNA_L-elsbetiae_contig12130.1780.1 ID=mRNA_L-elsbetiae_contig12130.1780.1|Name=mRNA_L-elsbetiae_contig12130.1780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig12130:668..2271+ (Laminarionema elsbetiae ELsaHSoW15)
ATTGAGAGGACGGAAGACAAGGCAGAGGCCAGCGTTTTCGTGCTCAACAC
GTGCTCCATCCGTGACCACGCGGAGCAGAAGGTTTACTCCTACGTCGGGC
CGTACGCGATCCGCAAGCAGAAGGGCGAGAACATCGCCATTGTGGTAGCC
GGATTGAGAGGACGGAAGACAAGGCAGAGGCCAGCGTTTTCGTGCTCAAC
ACGTGCTCCATCCGTGACCACGCGGAGCAGAAGGTTTACTCCTACGTCGG
GCCGTACGCGATCCGCAAGCAGAAGGGCGAGAACATCGCCATTGTGGTAG
CCGGATGCGTCGCCCAGCAGGAGGGGGAGAAGCTTCTCCGCAGGGTGCCC
GAGATCGACCTCGTCATGGGCCCGCAGTACGCCAACCGCCTGGGGGACCT
CCTGGAGGACGTCATGAACGGAAACCAGATGCGTCGCCCAGCAGGAGGGG
GAGAAGCTTCTCCGCAGGGTGCCCGAGATCGACCTCGTCATGGGCCCGCA
GTACGCCAACCGCCTGGGGGACCTCCTGGAGGACGTCATGAACGGAAACC
AGATCGTGGCGACGGACCCGTCCCTGATCATGGAGGATATCTCCAAGCCC
CGCCGCGCCAGCTCCACGTGCGCCTGGGTCAACATCATTTATGGCTGCAA
CGAGCACTGCACTTACTGCGTCGTGCCCGGCGTGCGGGGCGTGGAGCAGA
GCCGGCCCATGGAATCCATCCGGCAGGAGATGGTGGAGCTCGCCGCCGCG
GGCTACCGGGAGGTGCGTGAGGCGTAAATCGTGGCGACGGACCCGTCCCT
GATCATGGAGGATATCTCCAAGCCCCGCCGCGCCAGCTCCACGTGCGCCT
GGGTCAACATCATTTATGGCTGCAACGAGCACTGCACTTACTGCGTCGTG
CCCGGCGTGCGGGGCGTGGAGCAGAGCCGGCCCATGGAATCCATCCGGCA
GGAGATGGTGGAGCTCGCCGCCGCGGGCTACCGGGAGGTGCGTGAGGCGT
AA
back to top