mRNA_L-elsbetiae_contig12123.1776.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: D8LUA8_ECTSI (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA8_ECTSI) HSP 1 Score: 332 bits (851), Expect = 8.710e-107 Identity = 180/242 (74.38%), Postives = 190/242 (78.51%), Query Frame = 1 Query: 22 QVPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQ----------------------------------------GYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 +VP GQTVAIVG SGCGKSTI+RLLYRFFDI+SGSIKIAGQDIK VSQ SLRRAVGVVPQDTVLFNDTIGYNIAYGDL A E+V E ARKAQLD+SIASMPQ GY TVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDT+TETEIMGHLK LGRNRT+IIIAHRLSTVKDADKI+VLDQG+VVEEGNHAE+ A Sbjct: 463 EVPAGQTVAIVGHSGCGKSTIMRLLYRFFDINSGSIKIAGQDIKEVSQASLRRAVGVVPQDTVLFNDTIGYNIAYGDLCAGTEEVEEAARKAQLDSSIASMPQDGAARYARRQHTRPRYASIPWRHVLDFVSAHVLFLSRPLKGYGTVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTKTETEIMGHLKTLGRNRTSIIIAHRLSTVKDADKIIVLDQGKVVEEGNHAELMA 704
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A7S1CE28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CE28_9STRA) HSP 1 Score: 268 bits (685), Expect = 2.740e-88 Identity = 131/200 (65.50%), Postives = 163/200 (81.50%), Query Frame = 1 Query: 28 PPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 P G TVA+VG SGCGKST++RLLYRF+D+ GS+KI GQD++ V+ SLRR +GVVPQDTVLF+DTI +NI YGDL A E+V + AR AQ+ +I MP GY+T+VGERGL +SGGEKQRVAIARA+LK+APILLCDE TS+LDT TE +IMG L+ L R RTTI+IAHRLSTV+DAD+I+V+ G+VVE G H ++ A Sbjct: 1 PAGATVAVVGPSGCGKSTLVRLLYRFYDVHGGSVKIDGQDVRDVTMESLRRNIGVVPQDTVLFHDTIMHNIQYGDLDATEEEVYQAARAAQVHDAIMRMPDGYDTIVGERGLKLSGGEKQRVAIARAILKDAPILLCDEATSALDTTTENDIMGSLRQLARGRTTILIAHRLSTVQDADQILVMGDGKVVEAGTHDQLLA 200
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: W7TLP4_9STRA (Abc transporter b family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLP4_9STRA) HSP 1 Score: 279 bits (713), Expect = 4.320e-87 Identity = 141/202 (69.80%), Postives = 169/202 (83.66%), Query Frame = 1 Query: 22 QVPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 +VP GQTVA+VG SGCGKST++RLLYRF+D+D GSI+I QDI+ V SLRRA+GVVPQDT+LFNDTI YNI YG+L A+ V ARKAQ+ SI MPQGYET VGERGL +SGGE+QRVAIARA+LK+AP+LLCDE TS+LD TE EIM H+K LG+ +TT++IAHRLST++DADKIVVLDQGRVVEEG+H E+ A Sbjct: 408 KVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLA 609
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A7S3P5P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5P7_9STRA) HSP 1 Score: 262 bits (669), Expect = 6.650e-85 Identity = 130/200 (65.00%), Postives = 165/200 (82.50%), Query Frame = 1 Query: 25 VPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKN-APILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEV 621 +P G+T+AIVG SG GKSTI+RLLYRF++ D+G I + G+ ++ +Q S++RA+ VVPQDTVLF+D+I YNI YG+L A PE V E A++A++ SI P GY+TVVGERGL +SGGEKQRVAIARA+LKN APILLCDEPTSSLDT+TET +M +LK +G+ RTTIIIAHRLST++D D+IVV+DQGRVVE G H E+ Sbjct: 71 IPQGKTMAIVGSSGSGKSTILRLLYRFYEADAGEILLGGKPLEAWTQASIQRAMAVVPQDTVLFHDSIFYNIHYGNLKATPEQVYEAAKQAEIHESILRFPDGYDTVVGERGLKLSGGEKQRVAIARAILKNNAPILLCDEPTSSLDTETETALMDNLKRVGQGRTTIIIAHRLSTIQDCDEIVVMDQGRVVERGTHDEL 270
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A836CGR1_9STRA (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR1_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.000e-84 Identity = 137/202 (67.82%), Postives = 165/202 (81.68%), Query Frame = 1 Query: 22 QVPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 +VP G+TVA+VG SGCGKST+IRLLYR +D SGS+ I GQD+ V +SLRR + VVPQDTVLF+DTIGYN+ YG+LT E V E A +A L +IA MP+GY+TVVGERGLM+SGGEKQRVAIARAMLKNAP+LLCDEPTS+LD++TE +M LK+LG RTT+IIAHRLSTV+DAD+IVVLD G+VVE G H + A Sbjct: 478 EVPAGKTVAVVGHSGCGKSTLIRLLYRLYDASSGSVTIDGQDVTKVQLSSLRRHIAVVPQDTVLFHDTIGYNLHYGNLTQPWEKVVEAAEQASLTDAIARMPRGYDTVVGERGLMLSGGEKQRVAIARAMLKNAPVLLCDEPTSALDSRTEVAVMSKLKSLGSGRTTLIIAHRLSTVQDADEIVVLDNGQVVERGAHFALLA 679
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A7S2N4Z9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4Z9_9STRA) HSP 1 Score: 266 bits (679), Expect = 2.280e-83 Identity = 127/201 (63.18%), Postives = 166/201 (82.59%), Query Frame = 1 Query: 25 VPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 V GQTVA+VG SGCGKSTI+R+LYRF++ + G+I + G++I+ ++ S+R+A+ VVPQDTVLFN++IGYNI YGDL+A+ EDV A+KA + ++ S P GY+TVVGERGL +SGGEKQRVAIARA+L APILLCDEPTSSLD+ TE +IM +LK +G+NRTT+IIAHRLST++D D I+VL +G+VVE G HAE+ A Sbjct: 309 VKEGQTVALVGSSGCGKSTILRMLYRFYEPEKGTITLGGRNIQDMTTQSVRKAIAVVPQDTVLFNESIGYNIHYGDLSASWEDVIHAAKKAHIHDTVMSFPDGYDTVVGERGLKLSGGEKQRVAIARAILNKAPILLCDEPTSSLDSHTEADIMNNLKEIGKNRTTVIIAHRLSTIQDCDDIIVLHEGKVVERGMHAELVA 509
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A6V2Q6L2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q6L2_9STRA) HSP 1 Score: 270 bits (691), Expect = 3.220e-83 Identity = 129/201 (64.18%), Postives = 166/201 (82.59%), Query Frame = 1 Query: 25 VPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 V GQTVA+VG SGCGKST++R+LYRF++ D GSI + G ++K ++ S+R+A+ VVPQDTVLFN+TIGYNI YGDL+A+ EDV A+KA + +I S P GY+T+VGERGL +SGGEKQRVAIARA+LK APILLCDEPTSSLD+ TE +IM +LK +G+N TT+IIAHRLST++D D+I+VL++GRVVE G H E+ A Sbjct: 506 VKEGQTVALVGSSGCGKSTLLRMLYRFYEPDKGSITLGGHNMKDLTTESVRKAIAVVPQDTVLFNETIGYNINYGDLSASKEDVITAAKKAHIHDTILSFPNGYDTIVGERGLKLSGGEKQRVAIARAILKKAPILLCDEPTSSLDSHTEADIMNNLKEIGKNTTTLIIAHRLSTIQDCDEIIVLNEGRVVERGTHDELVA 706
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A6T8JV75_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JV75_9STRA) HSP 1 Score: 258 bits (659), Expect = 6.570e-83 Identity = 127/199 (63.82%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 25 VPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEV 621 V G+TVAIVG SG GKST+IRLLYRF+D + G I I G+ +S S+R+ + VVPQDTVLFN+TI YNI YG+L + EDV A+ A++ +I P+GY+TVVGERGL +SGGEKQRVAIARA+LKNAPILLCDEPTSSLD++TE +IM +LK +G+N TTIIIAHRLST++D D+IVV D+GRVVE G H E+ Sbjct: 95 VQEGKTVAIVGSSGSGKSTVIRLLYRFYDAEKGDITIGGKSTHDLSDESIRKQIAVVPQDTVLFNETIAYNIQYGNLDLSQEDVVSAAKAAKIHNTIMRFPKGYDTVVGERGLKLSGGEKQRVAIARAILKNAPILLCDEPTSSLDSETEHDIMSNLKEIGKNMTTIIIAHRLSTIQDCDEIVVCDEGRVVERGTHDEL 293
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: B7G6F6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6F6_PHATC) HSP 1 Score: 265 bits (677), Expect = 1.550e-82 Identity = 128/198 (64.65%), Postives = 166/198 (83.84%), Query Frame = 1 Query: 34 GQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 G+TVA VG SGCGKSTI+RLLYRF+ D G I + G DI+ +++ SL+RA+ VVPQDTVLF+++I YNI YGDL+A+ ++V E A+KA++ +I S P GYETVVGERGL +SGGEKQRVAIARA+LKNAPILLCDEPTSSLD++TET+IM +LK +G+ RTT+IIAHRLST++D D+I+V+++G VVE G H E+ A Sbjct: 369 GKTVAFVGSSGCGKSTILRLLYRFYHPDQGLISVGGHDIQDMTKYSLQRAIAVVPQDTVLFHESIAYNIQYGDLSASWDEVIEAAKKAKIHDTIMSFPDGYETVVGERGLKLSGGEKQRVAIARAILKNAPILLCDEPTSSLDSETETDIMSNLKDVGKGRTTLIIAHRLSTIQDCDEIIVMNRGMVVERGTHDELIA 566
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Match: A0A3B9YSH8_9PROT (Metal ABC transporter permease (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9YSH8_9PROT) HSP 1 Score: 256 bits (655), Expect = 2.650e-82 Identity = 127/201 (63.18%), Postives = 154/201 (76.62%), Query Frame = 1 Query: 25 VPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIKGVSQTSLRRAVGVVPQDTVLFNDTIGYNIAYGDLTAAPEDVTEVARKAQLDASIASMPQGYETVVGERGLMISGGEKQRVAIARAMLKNAPILLCDEPTSSLDTQTETEIMGHLKALGRNRTTIIIAHRLSTVKDADKIVVLDQGRVVEEGNHAEVCA 627 VP G+TVAIVG SG GKSTI R+LYRF+DI SG + I GQD++ VSQ S+R +G+VPQDTVLFNDTI YNI YG + A D+ E AR AQ++ I +P G+ +VGERGL +SGGEKQRVAIAR +LKN PIL+ DE TS+LDT TE EI LK + RNRTT++IAHRLSTV DAD+I+VLD GR+VE G H E+ A Sbjct: 83 VPAGKTVAIVGPSGAGKSTISRILYRFYDIQSGRVTIDGQDLRDVSQASVREVIGIVPQDTVLFNDTIRYNIRYGRIDATDADIEEAARLAQIEPFIKQLPDGFAAMVGERGLKLSGGEKQRVAIARTLLKNPPILILDEATSALDTHTEREIQSALKVVSRNRTTLVIAHRLSTVVDADEILVLDAGRIVERGRHTELLA 283 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12123.1776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12123.1776.1 >prot_L-elsbetiae_contig12123.1776.1 ID=prot_L-elsbetiae_contig12123.1776.1|Name=mRNA_L-elsbetiae_contig12123.1776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp MVFYVVSQVPPGQTVAIVGQSGCGKSTIIRLLYRFFDIDSGSIKIAGQDIback to top mRNA from alignment at L-elsbetiae_contig12123:3229..5719+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12123.1776.1 ID=mRNA_L-elsbetiae_contig12123.1776.1|Name=mRNA_L-elsbetiae_contig12123.1776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2491bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:3229..5719+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12123:3229..5719+ >mRNA_L-elsbetiae_contig12123.1776.1 ID=mRNA_L-elsbetiae_contig12123.1776.1|Name=mRNA_L-elsbetiae_contig12123.1776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:3229..5719+ (Laminarionema elsbetiae ELsaHSoW15)back to top |