mRNA_L-elsbetiae_contig12123.1775.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12123.1775.1
Unique NamemRNA_L-elsbetiae_contig12123.1775.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: D8LUA8_ECTSI (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA8_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.200e-74
Identity = 134/177 (75.71%), Postives = 148/177 (83.62%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531
            +N    K FNNEAHEASRYD+SLKGFQEAS+KTQTSLSMLN+GQ+VIFS GLT IMALAA+DIAAG++TVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMF+ISDT P+       V D E A ELV+ADVGGISFTDVRFGYGPDR+ILKGLTFE        ++G  G
Sbjct:  308 VNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSLSMLNVGQHVIFSTGLTAIMALAASDIAAGHSTVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFKISDTVPQ-------VTDREGAAELVNADVGGISFTDVRFGYGPDREILKGLTFEVPAGQTVAIVGHSG 477          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A836CGR1_9STRA (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 7.280e-51
Identity = 106/169 (62.72%), Postives = 121/169 (71.60%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESA--VELVDADV----GGISFTDVRFGYGPDRQILKGLTFE 501
            +N    K FNNE HEA+RYD SL+G+Q A+LKT TSLS+LN GQN IFSVGLT +MALAA DIAAG ATVGDLVLVNGLLFQL+IPL FVGSTYRE+RQAL+DMTAMF +SD  PK       VA G  A  ++L  AD     G + F +V F Y   R IL GLT E
Sbjct:  317 VNYETVKFFNNEEHEANRYDKSLEGYQHAALKTGTSLSLLNFGQNAIFSVGLTAVMALAARDIAAGTATVGDLVLVNGLLFQLSIPLNFVGSTYRELRQALLDMTAMFALSDVQPK-------VASGPEAPPLQLAHADAAVPPGTLRFDNVHFSYPGGRPILNGLTLE 478          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S4DCW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW5_HETAK)

HSP 1 Score: 174 bits (442), Expect = 7.510e-48
Identity = 103/180 (57.22%), Postives = 119/180 (66.11%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGY-GPD--RQILKGLTFEASR----ELIGQEG 531
            +N    K FNNE HE  RY+ +LK +Q A+LKTQTSLS+LN GQN +FS GL  +MALAA DIA G  TVGDLVLVNGLLFQLAIPL F+GSTYRE+R AL DM AMFQ++D  P+ R       D   AV L D   G + F DV FGY GP   RQIL GL+FE        L+G  G
Sbjct:  317 INYETVKYFNNEGHERERYEKNLKEYQRAALKTQTSLSLLNFGQNAVFSAGLAAVMALAAGDIARGAMTVGDLVLVNGLLFQLAIPLNFIGSTYREIRLALQDMAAMFQLTDVQPQVR-------DAPGAVPL-DFQGGALRFEDVHFGYDGPSGRRQILNGLSFEVPAGKTVALVGPSG 488          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A2D4C2C6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2C6_PYTIN)

HSP 1 Score: 167 bits (422), Expect = 3.190e-45
Identity = 95/177 (53.67%), Postives = 119/177 (67.23%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF--EASRE--LIGQEG 531
            +N    K FNNE HEA+RYD+SLKG+Q+A+LKTQTSLS+LN GQN IFSVGLT IM +A+  IA G  TVGDLVLVNGLLFQL+IPL F+G+ YREVRQA+ DM AMF + +  PK       +A     + L   +   I F D+ F Y PD  IL+G +F  EA +   ++G  G
Sbjct:  297 MNYETVKYFNNENHEANRYDESLKGYQKAALKTQTSLSLLNAGQNGIFSVGLTAIMYMASQGIADGTMTVGDLVLVNGLLFQLSIPLNFIGTLYREVRQAVTDMEAMFALGNVQPK-------IAQPTEPLRLTGKEPKTIEFRDIHFAYRPDFPILQGASFKIEAGKTVAIVGTSG 466          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A8K1FKS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKS1_PYTOL)

HSP 1 Score: 167 bits (422), Expect = 4.650e-45
Identity = 99/177 (55.93%), Postives = 121/177 (68.36%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF--EASRE--LIGQEG 531
            +N    K FNNE HEASRYD+SL G+Q+A+LKTQTSLS+LN GQN IFSVGLT IM +A+ DIAAG  TVGDLVLVNGLLFQL+IPL F+G+ YREVRQ+L DM AMF +     K+  K+      ES + L   +   I F DV F Y P+  ILKG +F  EA +   ++G  G
Sbjct:  311 MNYETVKYFNNEGHEASRYDESLLGYQKAALKTQTSLSLLNAGQNGIFSVGLTAIMYMASQDIAAGALTVGDLVLVNGLLFQLSIPLNFIGTIYREVRQSLTDMEAMFALGAV--KSNIKY-----AESPLRLTGKEPKTIEFRDVEFAYRPEFPILKGASFKVEAGKTVAIVGTSG 480          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A024UJW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJW7_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.310e-44
Identity = 89/162 (54.94%), Postives = 110/162 (67.90%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF 498
            +N    K FNNEAHEAS+YD ++K +Q+ASLKTQTSLS LN GQN IFS GLTG+M LA   IA G  TVGDLVLVNGLLFQL+IPL F+GS YREVRQ+++DM AMF +   P       F      ++   V+     I+F +V FGY P + IL G++F
Sbjct:   56 MNYETVKYFNNEAHEASKYDATIKQYQDASLKTQTSLSFLNAGQNAIFSAGLTGVMYLATQGIADGALTVGDLVLVNGLLFQLSIPLNFIGSVYREVRQSVVDMEAMFALQAVPSSIPPPSFT-----TSATSVERTPKTITFDNVSFGYRPGQPILNGMSF 212          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S1B7M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7M4_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.030e-44
Identity = 97/181 (53.59%), Postives = 113/181 (62.43%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGG-ISFTDVRFGY---GPDRQILKGLTFEASR----ELIGQEG 531
            LN    K F NE HE  RY+ SLKG+Q+ASLK Q+SLSMLN GQN IFSVGLT IM L A D+ AG ATVGDLVLVNGLLFQL+IPL F+GS YREVRQ LIDM AMF +  T P        + D   A+E      G  I F DV+F Y     +R +L G+T +        L+G  G
Sbjct:  181 LNYETVKYFGNERHEGERYESSLKGYQQASLKAQSSLSMLNFGQNAIFSVGLTAIMYLTAQDVMAGTATVGDLVLVNGLLFQLSIPLNFIGSVYREVRQCLIDMEAMFTLKGTAPA-------IVDDPKAIEYDPTAQGTKIVFDDVKFSYPVANGERTVLDGVTLDVEEGKTVALVGASG 354          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: M4C5K5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5K5_HYAAE)

HSP 1 Score: 164 bits (416), Expect = 3.150e-44
Identity = 90/177 (50.85%), Postives = 117/177 (66.10%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531
            +N    K FNNEAHE   YDDSLKG+Q+A+LKTQTSL+MLN GQN IF VGLT IM +A   IAAG  TVGDLVLVNGLLFQL+IPL F+GS YREVRQ++ DM +MF++    P       ++ + ++ + L+  +   I F DV FGY P+  IL+  +F+        ++G  G
Sbjct:  309 MNYETVKYFNNEAHEIEHYDDSLKGYQKAALKTQTSLAMLNAGQNGIFGVGLTVIMYMACEGIAAGTLTVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFRLGAETP-------VITNSDANLSLIGKEPKSIEFRDVNFGYRPELPILRNTSFKVDAGKRVAIVGTSG 478          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S3LK72_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK72_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.250e-44
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531
            +N    K F NE +E  +YD  L GFQ+ASL+T TSL+ LN GQN IFS GLT IM +AA DI AG+ TVGD+VLVNGLLFQL+IPL FVGS YRE+RQAL+DM  ++++ D  PK  EK     + E  V     D   I F +V FGY   RQIL+G TF          +G  G
Sbjct:   68 INYETVKYFGNEKYETDKYDAYLCGFQKASLQTTTSLAFLNFGQNAIFSAGLTAIMYMAANDIMAGSMTVGDIVLVNGLLFQLSIPLNFVGSIYREIRQALVDMDELYKLQDLKPKVVEKK----NAEKLVLPTTFDRPAIEFKNVHFGYSESRQILRGTTFSVGHGETVAFVGSSG 240          
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: K3X9V5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9V5_GLOUD)

HSP 1 Score: 164 bits (415), Expect = 3.880e-44
Identity = 91/163 (55.83%), Postives = 111/163 (68.10%), Query Frame = 1
Query:   13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFE 501
            +N    K FNNE HEA RYD+SLKG+Q+A+LKTQTSLS+LN GQN IFS+GLT IM +A  DI AG  TVGDLVLVNGLLFQL+IPL F+G+ YREVRQA+ DM AMF + +           +A  E+A+ L   +   I F DV F Y PD  IL   +F+
Sbjct:  300 MNYETVKYFNNEKHEADRYDESLKGYQQAALKTQTSLSLLNAGQNGIFSIGLTAIMYMATQDIMAGALTVGDLVLVNGLLFQLSIPLNFIGTIYREVRQAVTDMEAMFALGNVKSS-------IAQPENALTLTGKNPKSIEFRDVAFSYRPDYPILVKASFK 455          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUA8_ECTSI2.200e-7475.71Iron-sulfur clusters transporter atm1, mitochondri... [more]
A0A836CGR1_9STRA7.280e-5162.72Iron-sulfur clusters transporter atm1, mitochondri... [more]
A0A7S4DCW5_HETAK7.510e-4857.22Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4C2C6_PYTIN3.190e-4553.67Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1FKS1_PYTOL4.650e-4555.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UJW7_9STRA1.310e-4454.94Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S1B7M4_9STRA2.030e-4453.59Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
M4C5K5_HYAAE3.150e-4450.85Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A7S3LK72_9STRA3.250e-4451.41Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
K3X9V5_GLOUD3.880e-4455.83Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12123contigL-elsbetiae_contig12123:875..3010 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.6
Seed ortholog evalue1.1e-63
Seed eggNOG ortholog2880.D8LUA8
KEGG koko:K05662
KEGG TC3.A.1.210
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031154,GO:0031224,GO:0032502,GO:0032991,GO:0042623,GO:0042626,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071944,GO:0090702,GO:0098533,GO:0098796,GO:0098797,GO:0099120,GO:1902494,GO:1902495,GO:1904949,GO:1990351
EggNOG free text desc.ATP-binding cassette subfamily B
EggNOG OGsCOG5265@1,KOG0057@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-14_004310.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons3
Model size534
Cds size534
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12123.1775.1prot_L-elsbetiae_contig12123.1775.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12123 875..3010 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815411.7549093-CDS-L-elsbetiae_contig12123:874..10761622815411.7549093-CDS-L-elsbetiae_contig12123:874..1076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 875..1076 +
1691682886.1650603-CDS-L-elsbetiae_contig12123:874..10761691682886.1650603-CDS-L-elsbetiae_contig12123:874..1076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 875..1076 +
1622815411.7671294-CDS-L-elsbetiae_contig12123:2048..22271622815411.7671294-CDS-L-elsbetiae_contig12123:2048..2227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 2049..2227 +
1691682886.188545-CDS-L-elsbetiae_contig12123:2048..22271691682886.188545-CDS-L-elsbetiae_contig12123:2048..2227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 2049..2227 +
1622815411.7779934-CDS-L-elsbetiae_contig12123:2857..30101622815411.7779934-CDS-L-elsbetiae_contig12123:2857..3010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 2858..3010 +
1691682886.2049847-CDS-L-elsbetiae_contig12123:2857..30101691682886.2049847-CDS-L-elsbetiae_contig12123:2857..3010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12123 2858..3010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12123.1775.1

>prot_L-elsbetiae_contig12123.1775.1 ID=prot_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp
SDPPLNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNV
IFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYRE
VRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDV
RFGYGPDRQILKGLTFEASRELIGQEG*
back to top

mRNA from alignment at L-elsbetiae_contig12123:875..3010+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12123.1775.1 ID=mRNA_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:875..3010+ (Laminarionema elsbetiae ELsaHSoW15)
TCGGACCCCCCCCTTAACCCCCGGGCGGGGAAAGACTTCAACAACGAGGC CCACGAGGCCTCCCGGTACGACGACTCCCTCAAGGGTTTCCAGGAGGCGT CTCTCAAGACGCAGACGTCGCTCAGCATGCTCAACATGGGGCAGAACGTC ATCTTCAGCGTCGGCCTCACGGGGATCATGGCCCTGGCCGCCGCCGACAT CGGTGAGAAAGAGGGGGGGGGGAGGGAAGGGGGGCAGAGGGGGCGAGCGA GGCCCTCCTGGGGGCGCGGTAGGTGAGAGAGATGCTGCACGCGACGGGCG GCCCGGACAGGACGCCACGGCGGGGCGACCCTTTTGTCGTGGGGTTGTTG CTCTTCTTGTGTGTTTTGTCGTTGTTTGCGCGGAGGCGGCTTGTCGTTCC TTCCCGAAGTCACCTCACGCAGTCAGTCATGAACACGGCTGTTGCTCAGT TTTGTTGCCAGTCCCGCTCCCGAACAGCACACGGTCCGTTGAGTTTTTGT GGGTGTGCGGTGGGTAGAAAATGTTTCCCTTTTGAGTGGCACGACGTGGC CTTTTTTTTGTTCTGTTCGGCTGCTGCCGCAAAGGCGTTGCCGATTCAGC CACGCTCCGGGCTCAAAGAACGGCCCTCCTCCTCTTGTCTTCCGCGAAGC TCGCTGCTGTTCCCCCCCTTCTTCCCTTCCCTGTCCTTCCTTTTGGAGGA TAAGAGATGCCTGTTTTCATTTGCAGTACAATATCTTTTGTTTTTGTGCT GAACACATATCTCCCCCCCCCTGGAAGTTGGGTGGCAGCATGCGTACCTA CAATAAAAATAACGAAAGAGGGCGGCTCCCTTGCGGAACGGTGGTGGTGT GTGTACGTTGGTTGGTTTTGTAAGATATCGATTCGGACGACAACCGACAA CACATCAAAATAACAACACCCAGCAAGTAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCTCGGTCGCCCTCCTTCCCCTCGTAGCCGGAGGCGAC ACCGGCACCACCATAGCCTTGTGGACTGGTCACCAGTTCCGCTGCAGTAC TTTCTCTTCTTTCGCCCCCCATGGGCTCAAGGTCACTAGCCTTGCTCCCA TGGAAAAAGTATGGCCACGAACCTGAACGAATATATAATTTTGTGCTCGC CGTCCTCTTTTAATCTCGCCGCAGCGGCCGGGAACGCCACCGTGGGCGAC CTTGTCCTGGTGAACGGCCTCCTGTTCCAGCTGGCCATACCCCTCGGCTT CGTCGGCAGCACGTACCGCGAGGTCCGGCAGGCCCTGATCGACATGACGG CCATGTTTCAGATATCGGACACGCCCCCCAAGGCAAGAGAGAAGCACTTC TTGGTGCTCGCAGGATACACAAACAACCGGGATGTCTTGTTGGTGGCGCG CGTGACGTGCTGCGCCGTGGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCCGCGTGCACAAGTGCTCTCTGCCTGTCTGCCTGCCTGCCTGCCTG CCTGCCTGCCTGCCGTGTGCCTGCCGTGTGCCTGCCGTGTGCCTGCCTGC TGCAAGCTCGTGATGAGGAAAGGAGTGCAACGAAACTATTTTATGCATTT CTTCATTCGTCCGTCCCTGCCGGAAGCGGAGGAAGAACCACGAAAACAAA CAATCTGCGTGGTTTTCGGGCTGGGTTGCTTTGCTTTCTAACACGACGTA ATGGTGTGGCGCATGCATCGGCTTTGTTGGTCGCGGGCGATGACATGACA TGACATGGCATGACATGACATCAGATGGCCGTCGACGATCCACGAATGGC AATGTCTTCGAAGTATGTGAGACTTTTCCAGCGCACGCCTTCTTCACACT CTCGACCGCTTTCAATGATTAGTTGCTTTTTTTAGTTTTCCCGCAGTATC AAGGATACATGTATCTATATACGGGTAAATGTCTTTCTCTCGTTCATTTT GTTTTTTTGACTTTGGACATGGAACGGCCGCAGGTGGCCGACGGCGAAAG CGCGGTGGAGCTGGTCGACGCCGACGTCGGGGGCATTTCTTTCACGGACG TGCGTTTCGGGTACGGCCCTGACCGCCAGATCCTCAAGGGGCTCACGTTC GAGGCGAGTCGCGAGTTGATTGGTCAAGAGGGATGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig12123:875..3010+

>mRNA_L-elsbetiae_contig12123.1775.1 ID=mRNA_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:875..3010+ (Laminarionema elsbetiae ELsaHSoW15)
TCGGACCCCCCCCTTAACCCCCGGGCGGGGAAAGACTTCAACAACGAGGC
CCACGAGGCCTCCCGGTACGACGACTCCCTCAAGGGTTTCCAGGAGGCGT
CTCTCAAGACGCAGACGTCGCTCAGCATGCTCAACATGGGGCAGAACGTC
ATCTTCAGCGTCGGCCTCACGGGGATCATGGCCCTGGCCGCCGCCGACAT
CGTCGGACCCCCCCCTTAACCCCCGGGCGGGGAAAGACTTCAACAACGAG
GCCCACGAGGCCTCCCGGTACGACGACTCCCTCAAGGGTTTCCAGGAGGC
GTCTCTCAAGACGCAGACGTCGCTCAGCATGCTCAACATGGGGCAGAACG
TCATCTTCAGCGTCGGCCTCACGGGGATCATGGCCCTGGCCGCCGCCGAC
ATCGCGGCCGGGAACGCCACCGTGGGCGACCTTGTCCTGGTGAACGGCCT
CCTGTTCCAGCTGGCCATACCCCTCGGCTTCGTCGGCAGCACGTACCGCG
AGGTCCGGCAGGCCCTGATCGACATGACGGCCATGTTTCAGATATCGGAC
ACGCCCCCCAAGGCAAGAGAGAAGCACTTCTTGCGGCCGGGAACGCCACC
GTGGGCGACCTTGTCCTGGTGAACGGCCTCCTGTTCCAGCTGGCCATACC
CCTCGGCTTCGTCGGCAGCACGTACCGCGAGGTCCGGCAGGCCCTGATCG
ACATGACGGCCATGTTTCAGATATCGGACACGCCCCCCAAGGCAAGAGAG
AAGCACTTCTTGGTGGCCGACGGCGAAAGCGCGGTGGAGCTGGTCGACGC
CGACGTCGGGGGCATTTCTTTCACGGACGTGCGTTTCGGGTACGGCCCTG
ACCGCCAGATCCTCAAGGGGCTCACGTTCGAGGCGAGTCGCGAGTTGATT
GGTCAAGAGGGATGAGTGGCCGACGGCGAAAGCGCGGTGGAGCTGGTCGA
CGCCGACGTCGGGGGCATTTCTTTCACGGACGTGCGTTTCGGGTACGGCC
CTGACCGCCAGATCCTCAAGGGGCTCACGTTCGAGGCGAGTCGCGAGTTG
ATTGGTCAAGAGGGATGA
back to top