mRNA_L-elsbetiae_contig12123.1775.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: D8LUA8_ECTSI (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA8_ECTSI) HSP 1 Score: 246 bits (628), Expect = 2.200e-74 Identity = 134/177 (75.71%), Postives = 148/177 (83.62%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531 +N K FNNEAHEASRYD+SLKGFQEAS+KTQTSLSMLN+GQ+VIFS GLT IMALAA+DIAAG++TVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMF+ISDT P+ V D E A ELV+ADVGGISFTDVRFGYGPDR+ILKGLTFE ++G G Sbjct: 308 VNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSLSMLNVGQHVIFSTGLTAIMALAASDIAAGHSTVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFKISDTVPQ-------VTDREGAAELVNADVGGISFTDVRFGYGPDREILKGLTFEVPAGQTVAIVGHSG 477
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A836CGR1_9STRA (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR1_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.280e-51 Identity = 106/169 (62.72%), Postives = 121/169 (71.60%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESA--VELVDADV----GGISFTDVRFGYGPDRQILKGLTFE 501 +N K FNNE HEA+RYD SL+G+Q A+LKT TSLS+LN GQN IFSVGLT +MALAA DIAAG ATVGDLVLVNGLLFQL+IPL FVGSTYRE+RQAL+DMTAMF +SD PK VA G A ++L AD G + F +V F Y R IL GLT E Sbjct: 317 VNYETVKFFNNEEHEANRYDKSLEGYQHAALKTGTSLSLLNFGQNAIFSVGLTAVMALAARDIAAGTATVGDLVLVNGLLFQLSIPLNFVGSTYRELRQALLDMTAMFALSDVQPK-------VASGPEAPPLQLAHADAAVPPGTLRFDNVHFSYPGGRPILNGLTLE 478
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S4DCW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW5_HETAK) HSP 1 Score: 174 bits (442), Expect = 7.510e-48 Identity = 103/180 (57.22%), Postives = 119/180 (66.11%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGY-GPD--RQILKGLTFEASR----ELIGQEG 531 +N K FNNE HE RY+ +LK +Q A+LKTQTSLS+LN GQN +FS GL +MALAA DIA G TVGDLVLVNGLLFQLAIPL F+GSTYRE+R AL DM AMFQ++D P+ R D AV L D G + F DV FGY GP RQIL GL+FE L+G G Sbjct: 317 INYETVKYFNNEGHERERYEKNLKEYQRAALKTQTSLSLLNFGQNAVFSAGLAAVMALAAGDIARGAMTVGDLVLVNGLLFQLAIPLNFIGSTYREIRLALQDMAAMFQLTDVQPQVR-------DAPGAVPL-DFQGGALRFEDVHFGYDGPSGRRQILNGLSFEVPAGKTVALVGPSG 488
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A2D4C2C6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2C6_PYTIN) HSP 1 Score: 167 bits (422), Expect = 3.190e-45 Identity = 95/177 (53.67%), Postives = 119/177 (67.23%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF--EASRE--LIGQEG 531 +N K FNNE HEA+RYD+SLKG+Q+A+LKTQTSLS+LN GQN IFSVGLT IM +A+ IA G TVGDLVLVNGLLFQL+IPL F+G+ YREVRQA+ DM AMF + + PK +A + L + I F D+ F Y PD IL+G +F EA + ++G G Sbjct: 297 MNYETVKYFNNENHEANRYDESLKGYQKAALKTQTSLSLLNAGQNGIFSVGLTAIMYMASQGIADGTMTVGDLVLVNGLLFQLSIPLNFIGTLYREVRQAVTDMEAMFALGNVQPK-------IAQPTEPLRLTGKEPKTIEFRDIHFAYRPDFPILQGASFKIEAGKTVAIVGTSG 466
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A8K1FKS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKS1_PYTOL) HSP 1 Score: 167 bits (422), Expect = 4.650e-45 Identity = 99/177 (55.93%), Postives = 121/177 (68.36%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF--EASRE--LIGQEG 531 +N K FNNE HEASRYD+SL G+Q+A+LKTQTSLS+LN GQN IFSVGLT IM +A+ DIAAG TVGDLVLVNGLLFQL+IPL F+G+ YREVRQ+L DM AMF + K+ K+ ES + L + I F DV F Y P+ ILKG +F EA + ++G G Sbjct: 311 MNYETVKYFNNEGHEASRYDESLLGYQKAALKTQTSLSLLNAGQNGIFSVGLTAIMYMASQDIAAGALTVGDLVLVNGLLFQLSIPLNFIGTIYREVRQSLTDMEAMFALGAV--KSNIKY-----AESPLRLTGKEPKTIEFRDVEFAYRPEFPILKGASFKVEAGKTVAIVGTSG 480
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A024UJW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJW7_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.310e-44 Identity = 89/162 (54.94%), Postives = 110/162 (67.90%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTF 498 +N K FNNEAHEAS+YD ++K +Q+ASLKTQTSLS LN GQN IFS GLTG+M LA IA G TVGDLVLVNGLLFQL+IPL F+GS YREVRQ+++DM AMF + P F ++ V+ I+F +V FGY P + IL G++F Sbjct: 56 MNYETVKYFNNEAHEASKYDATIKQYQDASLKTQTSLSFLNAGQNAIFSAGLTGVMYLATQGIADGALTVGDLVLVNGLLFQLSIPLNFIGSVYREVRQSVVDMEAMFALQAVPSSIPPPSFT-----TSATSVERTPKTITFDNVSFGYRPGQPILNGMSF 212
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S1B7M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7M4_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.030e-44 Identity = 97/181 (53.59%), Postives = 113/181 (62.43%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGG-ISFTDVRFGY---GPDRQILKGLTFEASR----ELIGQEG 531 LN K F NE HE RY+ SLKG+Q+ASLK Q+SLSMLN GQN IFSVGLT IM L A D+ AG ATVGDLVLVNGLLFQL+IPL F+GS YREVRQ LIDM AMF + T P + D A+E G I F DV+F Y +R +L G+T + L+G G Sbjct: 181 LNYETVKYFGNERHEGERYESSLKGYQQASLKAQSSLSMLNFGQNAIFSVGLTAIMYLTAQDVMAGTATVGDLVLVNGLLFQLSIPLNFIGSVYREVRQCLIDMEAMFTLKGTAPA-------IVDDPKAIEYDPTAQGTKIVFDDVKFSYPVANGERTVLDGVTLDVEEGKTVALVGASG 354
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: M4C5K5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5K5_HYAAE) HSP 1 Score: 164 bits (416), Expect = 3.150e-44 Identity = 90/177 (50.85%), Postives = 117/177 (66.10%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531 +N K FNNEAHE YDDSLKG+Q+A+LKTQTSL+MLN GQN IF VGLT IM +A IAAG TVGDLVLVNGLLFQL+IPL F+GS YREVRQ++ DM +MF++ P ++ + ++ + L+ + I F DV FGY P+ IL+ +F+ ++G G Sbjct: 309 MNYETVKYFNNEAHEIEHYDDSLKGYQKAALKTQTSLAMLNAGQNGIFGVGLTVIMYMACEGIAAGTLTVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFRLGAETP-------VITNSDANLSLIGKEPKSIEFRDVNFGYRPELPILRNTSFKVDAGKRVAIVGTSG 478
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: A0A7S3LK72_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK72_9STRA) HSP 1 Score: 160 bits (406), Expect = 3.250e-44 Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFEASR----ELIGQEG 531 +N K F NE +E +YD L GFQ+ASL+T TSL+ LN GQN IFS GLT IM +AA DI AG+ TVGD+VLVNGLLFQL+IPL FVGS YRE+RQAL+DM ++++ D PK EK + E V D I F +V FGY RQIL+G TF +G G Sbjct: 68 INYETVKYFGNEKYETDKYDAYLCGFQKASLQTTTSLAFLNFGQNAIFSAGLTAIMYMAANDIMAGSMTVGDIVLVNGLLFQLSIPLNFVGSIYREIRQALVDMDELYKLQDLKPKVVEKK----NAEKLVLPTTFDRPAIEFKNVHFGYSESRQILRGTTFSVGHGETVAFVGSSG 240
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Match: K3X9V5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9V5_GLOUD) HSP 1 Score: 164 bits (415), Expect = 3.880e-44 Identity = 91/163 (55.83%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 13 LNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVIFSVGLTGIMALAAADIAAGNATVGDLVLVNGLLFQLAIPLGFVGSTYREVRQALIDMTAMFQISDTPPKAREKHFLVADGESAVELVDADVGGISFTDVRFGYGPDRQILKGLTFE 501 +N K FNNE HEA RYD+SLKG+Q+A+LKTQTSLS+LN GQN IFS+GLT IM +A DI AG TVGDLVLVNGLLFQL+IPL F+G+ YREVRQA+ DM AMF + + +A E+A+ L + I F DV F Y PD IL +F+ Sbjct: 300 MNYETVKYFNNEKHEADRYDESLKGYQQAALKTQTSLSLLNAGQNGIFSIGLTAIMYMATQDIMAGALTVGDLVLVNGLLFQLSIPLNFIGTIYREVRQAVTDMEAMFALGNVKSS-------IAQPENALTLTGKNPKSIEFRDVAFSYRPDYPILVKASFK 455 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12123.1775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12123.1775.1 >prot_L-elsbetiae_contig12123.1775.1 ID=prot_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp SDPPLNPRAGKDFNNEAHEASRYDDSLKGFQEASLKTQTSLSMLNMGQNVback to top mRNA from alignment at L-elsbetiae_contig12123:875..3010+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12123.1775.1 ID=mRNA_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:875..3010+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12123:875..3010+ >mRNA_L-elsbetiae_contig12123.1775.1 ID=mRNA_L-elsbetiae_contig12123.1775.1|Name=mRNA_L-elsbetiae_contig12123.1775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig12123:875..3010+ (Laminarionema elsbetiae ELsaHSoW15)back to top |