mRNA_L-elsbetiae_contig121.1762.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A6H5JBQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBQ1_9PHAE) HSP 1 Score: 276 bits (707), Expect = 7.750e-88 Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 1 Query: 1 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFPWYPAWAPVPVPDTITQ---GALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRA+GTG PT++WAGVRA FPWYPAWAPVPVPDTITQ GALITWWTYN+IVAADVGAYFVGKS+GKTKLSA+SPAAGYASPNKTIEGLLGGLAASSLAAT+GARLLR+ Sbjct: 387 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRALGTGFPTVSWAGVRAYFPWYPAWAPVPVPDTITQARQGALITWWTYNTIVAADVGAYFVGKSLGKTKLSAVSPAAGYASPNKTIEGLLGGLAASSLAATIGARLLRW 534
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A836CA52_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA52_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.440e-50 Identity = 92/147 (62.59%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 1 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFPWYPAWAP--VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 +IM Y+LL+R+TP TI DISTTFMGVFY AYLPSFWVRLR +G+ P V+ L +P+WAP +P PD T GAL+TWWTY SI+AADVGAYFVGK G+TKLS IS +AG+ASPNKTIEGLLGG+A S+ T A +L + Sbjct: 245 WIMLYYLLIRKTPGTISDISTTFMGVFYAAYLPSFWVRLRGLGSILPAEL-VLVKRLANVWPSWAPKMLPPPDVWTTGALVTWWTYVSIIAADVGAYFVGKRFGRTKLSTISKSAGHASPNKTIEGLLGGMAFSTAMGTFAAYMLSW 390
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A0G4EIK6_VITBC (Phosphatidate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EIK6_VITBC) HSP 1 Score: 156 bits (394), Expect = 5.840e-43 Identity = 80/146 (54.79%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 4 IMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFPWYPAWAP--VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 IM +FLL+R +P TI +IST+FMG+F+ +YLPSFW+RLR +G T + + L WYP W P P PD TQGA++TWWT+ SI DV AYF+GKS G+ KL++ISPAAG ASPNKT+EG LGGL S L + +GA L+ + Sbjct: 227 IMVWFLLMRPSPGTISEISTSFMGLFWCSYLPSFWIRLRFLGPVEKT-RFVALLNLRKWYPPWLPKITPPPDLWTQGAVVTWWTFLSIAMGDVAAYFLGKSFGRRKLASISPAAGAASPNKTVEGALGGLLMSVLMSLLGAWLMHW 371
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: W7U3H9_9STRA (Phosphatidate cytidylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3H9_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.480e-40 Identity = 72/147 (48.98%), Postives = 107/147 (72.79%), Query Frame = 1 Query: 4 IMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFPWYPAWAP---VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 +M + LL+R+ PA I ++STT +G+FY YLPSFW+RLRA+G P+ +A + A +P+W P +P P+ T+GA++ WWTY +I+ AD+GAY GK++G+TKLS +S AAG SPNKT+EGLLGG ++++ AT+ +RLL + Sbjct: 192 VMIWLLLMRKAPAKITEVSTTILGMFYIGYLPSFWIRLRALGDVMPS-TFASILAKV--WPSWIPLRLIPDPEMWTEGAIVIWWTYLTIICADIGAYATGKTLGRTKLSTLSTAAGATSPNKTVEGLLGGFVSATVVATLMSRLLNW 335
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A7R9UDX9_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDX9_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.980e-37 Identity = 78/154 (50.65%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 1 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFP-------WYPAWAP-VPVP-DTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 ++M +FL++R A+I +IST+F+G+FY YLPSFWVRLR +G+ + A + A P W P+W P V + D T GA++TWWTY SIV ADVGAY VG+ G+T LS ISPAAG ASPNKT+EGLLGG A + L + +GA ++++ Sbjct: 305 WVMMWFLIMRMKYASIAEISTSFLGIFYAGYLPSFWVRLRRLGSDVGSEA---IMAKLPFLVGMGSWLPSWFPKVDLSRDMWTTGAVVTWWTYLSIVFADVGAYAVGRLFGRTPLSRISPAAGSASPNKTVEGLLGGAAFACLTSLLGAWVMQW 455
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A7S0VRI1_9CRYP (Phosphatidate cytidylyltransferase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VRI1_9CRYP) HSP 1 Score: 138 bits (348), Expect = 2.480e-36 Identity = 79/146 (54.11%), Postives = 98/146 (67.12%), Query Frame = 1 Query: 4 IMCYFLLVRRTP-ATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGVRALFPWYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYA-SPNKTIEGLLGGLAASSLAATVGARLLRY 435 I+ Y + ++RT ATI D+ TTFMG+FY YLPSFWVRLRA+G + +A + A AP+ PD TQGA++TWWT SI AADVGAYF GK+ G+TKLS A G SPNKT+EG LGG+A S L T GARL+R+ Sbjct: 218 ILAYLITLKRTEKATIADVQTTFMGIFYVGYLPSFWVRLRALGAIPASDIYAMLFAQKSSILISAPLFNPDIFTQGAIVTWWTMISIAAADVGAYFTGKNFGRTKLS---EATGITISPNKTVEGFLGGVALSCLFMTTGARLMRW 360
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A0G4G1U8_9ALVE (Phosphatidate cytidylyltransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G1U8_9ALVE) HSP 1 Score: 135 bits (341), Expect = 7.540e-35 Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 1 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPT----IAWAGVRALFPWYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAA--GYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 +IM +FLL+R+ P TI +I+T+FMG+FY AYLPSFWVRLR +G P +A ++ +PW P A P P T+GA+I WWT+ SI AD+GAYF G++ GK K S++ + G SPNKT+EG +GG S L + +GA L+ + Sbjct: 275 WIMLWFLLMRKQPGTISEIATSFMGLFYCAYLPSFWVRLRFLGKHQPVWTRFVALQKLKERYPWLPRIA--PAPSLWTKGAVIVWWTFLSISFADIGAYFFGRAFGKRKFSSVQSFSNLGRTSPNKTVEGFMGGTLCSLLLSVLGAWLMAW 423
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A7S0TS08_HEMAN (Phosphatidate cytidylyltransferase n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TS08_HEMAN) HSP 1 Score: 134 bits (338), Expect = 2.290e-34 Identity = 77/147 (52.38%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 4 IMCYFLLVRRTP-ATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAGV-RALFPWYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYA-SPNKTIEGLLGGLAASSLAATVGARLLRY 435 I+ Y + ++RT ATI D+ TTFMG+FY YLPSFWVRLRA+G + +A + + W A PD TQGA++TWWT SI AADVGAYF GK+ GKTKLS A G SPNKT+EG GG+A S + T GARL+R+ Sbjct: 311 IIAYLITLKRTEKATIADVQTTFMGIFYVGYLPSFWVRLRALGAIPASDVYAMMFTSKSSWLSAGPLWLYPDIFTQGAIVTWWTMISIAAADVGAYFTGKNFGKTKLS---EATGITISPNKTVEGFFGGVALSCVFMTTGARLMRW 454
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A7S1BM23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM23_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.360e-34 Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 7 MCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPT---------IAWAGVRA--LFPWYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISP--AAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 M +FLL RR +TI +I+TTF G+FY Y+PSFWVR+R +G PT + G +A L PW PA P+PV TQGA+ +W + SI +DVGAYF G++ G TKL ++SP A G SPNKT+EG++GG S+L +T GA ++R+ Sbjct: 129 MAWFLLARRNVSTIPEIATTFTGMFYLGYMPSFWVRVRQLGVREPTRMAPLVAPLLERIGTKAASLPPWIPASFPLPV----TQGAIFIFWAWISIAFSDVGAYFAGRNFGNTKLGSLSPDSALGETSPNKTVEGVVGGCLTSALFSTAGAWVMRW 280
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Match: A0A1Z5KHS4_FISSO (Phosphatidate cytidylyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHS4_FISSO) HSP 1 Score: 132 bits (332), Expect = 2.080e-33 Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 1 YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTG----------SPTIAWAGVRALFPWYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSMGKTKLSAISPAAGYASPNKTIEGLLGGLAASSLAATVGARLLRY 435 Y M +FL +RR+ ATI +I+TTF G+FY Y+PSFWVR+R +G SP + + +A P W P V IT GA+ +W++ + +DVGAYFVGK+ GKTKLSAISPAAG ASPNK++EG++GG S +GA ++R+ Sbjct: 327 YAMVWFLTMRRSVATIPEIATTFTGMFYLGYVPSFWVRIRLLGASREPTRLAPLLSPLVNFIQGKAT--QLPTWIPQAVHLPITTGAIFIFWSWLCLAFSDVGAYFVGKNFGKTKLSAISPAAGAASPNKSLEGVIGGCVVSGCLGVLGAWVMRW 479 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig121.1762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig121.1762.1 >prot_L-elsbetiae_contig121.1762.1 ID=prot_L-elsbetiae_contig121.1762.1|Name=mRNA_L-elsbetiae_contig121.1762.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp MCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGSPTIAWAback to top mRNA from alignment at L-elsbetiae_contig121:55360..56862- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig121.1762.1 ID=mRNA_L-elsbetiae_contig121.1762.1|Name=mRNA_L-elsbetiae_contig121.1762.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1503bp|location=Sequence derived from alignment at L-elsbetiae_contig121:55360..56862- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig121:55360..56862- >mRNA_L-elsbetiae_contig121.1762.1 ID=mRNA_L-elsbetiae_contig121.1762.1|Name=mRNA_L-elsbetiae_contig121.1762.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig121:55360..56862- (Laminarionema elsbetiae ELsaHSoW15)back to top |