mRNA_L-elsbetiae_contig12092.1755.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12092.1755.1
Unique NamemRNA_L-elsbetiae_contig12092.1755.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: D7G8B6_ECTSI (Cofac_haem_bdg domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B6_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 1.060e-94
Identity = 155/212 (73.11%), Postives = 178/212 (83.96%), Query Frame = 1 
Query:  409 RGQQTRADFLRAGASLAGLTAVVLGAQQEAAQAIDLGGVEFGFKNKNKFNIPDEDNPDRLRSPRPLAYRVEFTDPPTTVPFPRDFEPNLVKEMSGQRLVFFGVHGEDSRDPALTADVMGKISARLEDKAARVALQKKKKKKVEMQFQPALDAYVAGREGG------DLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            RGQQ+RADFLRAGAS+ G    VLGAQQEAA+AIDLGGVEFGF NKN F IP EDNPD LRSPRPLAYR+E+TDPPTTVPFPRD EPNLVKE++GQ LVFFGVHGED+ DPAL ADV+GK+SA L+++AA + L++     VEMQFQPALD+YVAG + G      DL  ADAELA+ATQW +RCAFPFENFLP+FHLAR RGLP+VA+GVD
Sbjct:  154 RGQQSRADFLRAGASMVGFAGAVLGAQQEAARAIDLGGVEFGFGNKNAFTIPPEDNPDGLRSPRPLAYRIEYTDPPTTVPFPRDTEPNLVKEIAGQGLVFFGVHGEDAPDPALAADVIGKLSASLKNQAA-IGLEQ-----VEMQFQPALDSYVAGGDQGGDGKDEDLDSADAELARATQWAERCAFPFENFLPLFHLARRRGLPMVALGVD 359
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: A0A6H5L6V7_9PHAE (Cofac_haem_bdg domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V7_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 9.980e-22
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:  838 MQFQPALDAYVAGR------EGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            MQFQPALD+YVAG       + GDL  ADAELA+ATQW +RCAFPFENFLP+ HLAR RGLP+VA+GVD
Sbjct:    1 MQFQPALDSYVAGGGQGGDGKDGDLDSADAELARATQWAERCAFPFENFLPLLHLARRRGLPMVALGVD 69
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: A0A0G4GPX1_VITBC (Cofac_haem_bdg domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GPX1_VITBC)

HSP 1 Score: 102 bits (253), Expect = 1.760e-20
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 1 
Query:  592 SPRPLAYRVEFTDPPTTVPFPRDF-EPNLVKEMSGQR-LVFFGVHGEDSRDPALTADVMGKISARLEDKAARVALQKKKKKKVEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            SPRPLAY++  TDPPT  P      E N++K++  +  LV  G H +   D  L   ++ ++     + A  + +       V++QFQPALD Y++ RE  DLA AD +L ++T+W+DR  FPFEN+LP+FH AR   +PLVA   D
Sbjct:   83 SPRPLAYQILPTDPPTMQPMTSGRGETNMLKKILRENELVLLGEHHDQGIDQELALRLVRELRGLHYNLALGLEM-------VQLQFQPALDRYIS-REVADLAAADEDLRRSTEWDDRWPFPFENYLPLFHWARQARVPLVAANTD 221
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: A0A835YPZ7_9STRA (Cofac_haem_bdg domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ7_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.400e-17
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 1 
Query:  583 RLRSPRPLAYRVEFTDPPTTVPFPRDFEPNLVKEMSGQRLVFFGVHGEDSRDPALTADVMGKISARLEDKAARVALQKKKKKKVEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRG---LPLVAMGVD 1026
            R RSPRP  YR+E+TDPPT VP+P   E  +   ++ Q+LVF G H   + D AL A ++ +++AR       + L       V+ + QPALDAY+A     D A A+ +L  +  W +     FE  LP    AR+RG   + LVA+  D
Sbjct:   22 RRRSPRPFLYRIEYTDPPTMVPYPEGTERKVEGVLASQQLVFLGAHTGSAEDGALAAGIVDRLAARKGKGKLLLGLAD-----VQQRLQPALDAYLAA---SDAAAAELQLRDSGGWAEGA---FEGCLPALRAARARGGGGVALVALAPD 161
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: A0A7S2Y0W5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 8.230e-10
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  832 VEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            ++ + QPALDAY+A +E  DLA AD  L + T+W     +P E +LPV HLARS+GLPL+A+  D
Sbjct:    5 IQQKCQPALDAYLA-KEIPDLAAADEALYEQTEWATTWPWPIEQYLPVLHLARSKGLPLIALNTD 68
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: F0YHQ3_AURAN (Cofac_haem_bdg domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHQ3_AURAN)

HSP 1 Score: 70.1 bits (170), Expect = 2.140e-9
Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 1 
Query:  673 LVKEMSGQRLVFFGVHGEDSRDPALTADVMGKISARLEDKAARVALQKKKKKKVEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            LV +++ +R VF G H +   D AL A ++  + A    +   V  +      V+ +FQPALDAY AG+       ++  LA AT+WE R ++PFE + PVF  A++    L+A+ VD
Sbjct: 1126 LVAQLARRRAVFLGEHHDAVADHALQAQLVAALRAAEPSRPLAVGFEA-----VQQRFQPALDAYGAGKL------SERRLAAATEWEQRWSWPFEAYAPVFRAAKAAKADLLALNVD 1232
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: B8CBB1_THAPS (Cofac_haem_bdg domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBB1_THAPS)

HSP 1 Score: 60.5 bits (145), Expect = 1.840e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1 
Query:  832 VEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD 1026
            V++QFQPALDAY+A +   D      E+ +  QW+ R ++ FE +LPVF   R  G+ L+A+ VD
Sbjct:  221 VQLQFQPALDAYIAKKISSD------EMRRQVQWDKRWSWSFEGYLPVFETCRKLGVTLIALNVD 279
[Close]
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Match: A0A0G4EQW0_VITBC (Cofac_haem_bdg domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EQW0_VITBC)

HSP 1 Score: 57.4 bits (137), Expect = 1.740e-5
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 1 
Query:  832 VEMQFQPALDAYVAGREGGDLAGADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAM 1017
            V++ FQP LD Y++G+        D +L   T+W  R A+PF+ +LP+F LA+ RGL L+A+
Sbjct:  204 VQVDFQPILDGYLSGKY------TDVDLYTKTEWATRWAWPFDAYLPIFQLAKKRGLHLIAL 259
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12092.1755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G8B6_ECTSI1.060e-9473.11Cofac_haem_bdg domain-containing protein n=1 Tax=E... [more]
A0A6H5L6V7_9PHAE9.980e-2271.01Cofac_haem_bdg domain-containing protein n=1 Tax=E... [more]
A0A0G4GPX1_VITBC1.760e-2040.82Cofac_haem_bdg domain-containing protein n=2 Tax=V... [more]
A0A835YPZ7_9STRA2.400e-1737.75Cofac_haem_bdg domain-containing protein (Fragment... [more]
A0A7S2Y0W5_9STRA8.230e-1050.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YHQ3_AURAN2.140e-935.59Cofac_haem_bdg domain-containing protein n=1 Tax=A... [more]
B8CBB1_THAPS1.840e-643.08Cofac_haem_bdg domain-containing protein n=1 Tax=T... [more]
A0A0G4EQW0_VITBC1.740e-541.94Cofac_haem_bdg domain-containing protein n=2 Tax=V... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12092contigL-elsbetiae_contig12092:871..5674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score304.3
Seed ortholog evalue7.2e-80
Seed eggNOG ortholog2880.D7G8B6
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Haem-binding uptake, Tiki superfamily, ChaN
EggNOG OGs2C7ZX@1,2S33F@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDomain of unknown function DUF399
Ec32 orthologEc-19_003860.1
Exons4
Model size1026
Cds size1026
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12092.1755.1prot_L-elsbetiae_contig12092.1755.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12092 871..5674 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815408.3114753-CDS-L-elsbetiae_contig12092:870..13651622815408.3114753-CDS-L-elsbetiae_contig12092:870..1365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 871..1365 +
1691682884.5475302-CDS-L-elsbetiae_contig12092:870..13651691682884.5475302-CDS-L-elsbetiae_contig12092:870..1365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 871..1365 +
1622815408.3231165-CDS-L-elsbetiae_contig12092:2862..30331622815408.3231165-CDS-L-elsbetiae_contig12092:2862..3033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 2863..3033 +
1691682884.5581286-CDS-L-elsbetiae_contig12092:2862..30331691682884.5581286-CDS-L-elsbetiae_contig12092:2862..3033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 2863..3033 +
1622815408.3457444-CDS-L-elsbetiae_contig12092:3406..35381622815408.3457444-CDS-L-elsbetiae_contig12092:3406..3538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 3407..3538 +
1691682884.5673428-CDS-L-elsbetiae_contig12092:3406..35381691682884.5673428-CDS-L-elsbetiae_contig12092:3406..3538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 3407..3538 +
1622815408.3567204-CDS-L-elsbetiae_contig12092:5446..56741622815408.3567204-CDS-L-elsbetiae_contig12092:5446..5674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 5447..5674 +
1691682884.5764294-CDS-L-elsbetiae_contig12092:5446..56741691682884.5764294-CDS-L-elsbetiae_contig12092:5446..5674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12092 5447..5674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12092.1755.1

>prot_L-elsbetiae_contig12092.1755.1 ID=prot_L-elsbetiae_contig12092.1755.1|Name=mRNA_L-elsbetiae_contig12092.1755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp
MNGTGVITVVLTLLTARAGAFVASPLSGATDASCVSPAVRSGGTSSLAEL
PYQQRHRRERQQQRQQKPNMILFSSRQHQQHTSQQRQRRRRGRAGSDHLQ
GGSTSIMNMHPGSSEGEDEDHRPQPRLPREQHKPPGRGQQTRADFLRAGA
SLAGLTAVVLGAQQEAAQAIDLGGVEFGFKNKNKFNIPDEDNPDRLRSPR
PLAYRVEFTDPPTTVPFPRDFEPNLVKEMSGQRLVFFGVHGEDSRDPALT
ADVMGKISARLEDKAARVALQKKKKKKVEMQFQPALDAYVAGREGGDLAG
ADAELAKATQWEDRCAFPFENFLPVFHLARSRGLPLVAMGVD
back to top

mRNA from alignment at L-elsbetiae_contig12092:871..5674+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12092.1755.1 ID=mRNA_L-elsbetiae_contig12092.1755.1|Name=mRNA_L-elsbetiae_contig12092.1755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4804bp|location=Sequence derived from alignment at L-elsbetiae_contig12092:871..5674+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGGCACCGGTGTGATCACCGTTGTTCTCACTTTGTTGACCGCTCG
AGCTGGAGCTTTCGTGGCATCGCCTTTGTCCGGAGCTACCGATGCTTCAT
GCGTATCGCCTGCGGTTAGAAGCGGCGGGACCAGCAGTCTCGCAGAGCTT
CCCTACCAGCAGAGACACAGAAGGGAGCGGCAGCAGCAGCGGCAGCAGAA
GCCGAACATGATTTTGTTCTCATCGCGACAGCACCAGCAGCACACATCTC
AGCAGCGGCAGCGACGGCGGCGTGGCCGTGCTGGCTCTGATCACCTCCAA
GGTGGATCAACTTCCATCATGAACATGCACCCCGGCAGTAGCGAGGGCGA
GGATGAGGATCACCGACCACAACCAAGACTGCCACGAGAGCAACATAAGC
CACCAGGGCGTGGGCAGCAGACTCGTGCAGATTTTCTTCGAGCGGGGGCG
TCCTTGGCCGGCCTGACCGCTGTGGTCCTAGGAGCGCAACAGGAGGTACT
AGACTACTGCTGCTGTTGTGGATATGACTACCGTCGGTGACAGAGGATAC
CACCCCCCTGGACATATTTTCAAAGCTCGATTCCTCCGTAGCGAAGAGGG
CGTCAGCACACAACGATACGTTCTCGGGCCGCCCTCGACTAGAACTTTCC
AACGCCACCTCTTTTGGCACTGTCACTCTTCTTGCTGGGGGGGAATCGAG
CTTTGAAAATCTGTACAAGGGGGAGGTATCTTGTGCCACCTACGGTATTT
TTTGCGAAGTGGTAGCTAGACTAGTAGGTTATACAAGGTTCCCCTTCGGG
AGGTCAGCGCGTGCCTCCCGAGGGTGACGCAAGTCGAAATACCCACAAAC
AACGTAGGACACGAGGTAGCACTTCAAACAAAAAGTGTTGCACGAAAAAA
AAACGCACGAAAAAAGCGTTTAAAAAAAAATGAAGGCCGTGCCGGGATTC
GAACCCGCGTCCGGATATTCGATGGTTTGGACGGAAGGAATCCCCCGCAA
CACCCCGCGAGATTTCTTTTTTTGCATGTGCCATCTGCCGTGTGTGGCCT
GCAACATCTGCGTTTTACTCTCCAAATATGTGCACACCGTCTTGCTGCGT
GTGGACGGACGTGCAGCCAGCAGTGTGCACGTATGCAAATGCGTGACGAG
CAGAAAAGAGACTCCGAAGAAAAAGAACAAACGCCTGTTTTAGTTTTTCC
GGAATCGGTACCCCGCAAAATAGAGCCAGTTTCGGCGGCTTTCGGCGGCC
ATAACTCGCGCCACCGGTGTCGCATGAACCCCACACACGGCTGATAATGT
ACCGACGGGTCCTCTGAGTGTCTTCCAGAAATAAAATTGAGACAAAACGA
TGTCCCAGCGGAGGAAATTGCACAGAAGCAGTAAAAAAGACGAAATGGTA
CTTAGACATACTAGAGGGGCTAGACTATCCCCTGAACCAAAGTAGTCAGC
GCTGACTACTTCGGCTCAGGGGACACAAGTTGCTGCGCGTGATCTCAACC
AGAGAACGAACACCTATGTACGAGCACGTCCAAATGACAGTTGCACAATC
TGGGTCCGCAACTCGCGCACATTGGCTGTGCACATGTATGTGCAGGCATG
TCTCTTGTATTGTTTTGATACATGTGAAGACTTCGACTTATTTTCGACAG
CGGTACTGCGGATGTATCTATCTACTCGGCAACTAGACGCATCTCAGAGG
CAACAGCCAACATCTAAGAGGACACGAATTATTTCAGGCAGGATAGTTCC
CCTCGCGGTACACAGCAGCAGTGCATGTAAACACTGCGGCTACGGTTTCT
TTTCGCGCGAAGTAATTTACTTCTACAAACTCCGTTCAGATATAGATGCG
GCGGTGGACGCCTTTTTAAAAATAAACAAAGAATCAAAGATGGAACCTAA
CCCACACTAGAGCAAAGACTCGATATGGGGTTTAAACGGTTTTCCATACA
GAGACGTAGCATTTGTTCCTACTGTTCTGTATCGCCGAACAGGCGGCGCA
AGCGATCGACCTCGGCGGCGTCGAGTTCGGCTTCAAGAACAAGAACAAAT
TCAACATTCCGGACGAGGACAACCCGGACCGGTTGCGGTCGCCCAGGCCG
CTCGCCTACCGCGTGGAGTTCACGGACCCTCCCACCACGGTTCCGTTCCC
GCGGGATTTCGAGGTAAGCGGGCGTGTGGGGTGGCGTGGCTCGTCCCTCG
GGGGGAAGGGGGGGAGGGGGGGGGGGGACGTGTTGGGGGAAATGCACAGC
ATCAACATGGGTATCGATACTTTTGGCCTCCGGCGCGTTAGTCCTTCCCC
GGCACATCTTCCGTCTGTCATCGCGGGGGCGCCCGCGCCAGCTCTGGCCC
AAGACCATTGCTCGATCGATTCGTGTCCTCGCTCTGGAGCCCCGTGTTTT
TGCGGCTCCGCACGAGAAAAGTGCATGCATGGCCGCGGGGGGGCCGACCG
ACCCCCCCCACATAACATAAACACCCCGCCGTCCCCCCCCCCCCCCCCCC
CTGCCTCTGCTGCTGTTTGCTCGCCAACCCTTTAAGCCCAACCTTGTCAA
GGAAATGTCGGGGCAGCGGCTGGTCTTCTTCGGCGTGCACGGGGAAGACT
CCAGAGATCCGGCGCTCACGGCGGACGTGATGGGCAAGATCTCTGCGAGG
CTCGAAGACAAGGCCGCCGTCGGACTCGAGCAGGCGAGCCACCACACATC
GCGGCAGTAACACGTAGATACATACGTACGTATTGCATTACGCAGGAAAC
CACCCATCGCGGTAATAACCCGTACATACACACGCATTACCCTAGGTGAC
ACAAGATACCACACCCCCTGCACCGAATTTTAGAGGTCCATTACCCCGTA
ACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGGACAGCACTCGACT
AGATCTTTCCAACGCCACCTCTTTCGGCAGTGACGCTCTTCTTGCTGGGG
AGGAATCGAGCTTTGAAAATGTGTCCAGGGGGTGTGGTATCTTGTGTCAC
CTACGGTACGCAGGTAAGCCACCACCCATCGCGGCAACAACACGTACATC
CACACGCATTAAGGGCGGGCTCTGCGCCGTCAGCAGCCGCCGGCCGGTAC
CTGGCGTGTTACTCTGTGAAAGAGAACCTGCAGGGCACAGGGACTTGGAT
CGTTTTTGCATTCTAAAGTGCCGTGTTCTGAGTGTGTGTGTTTGTGTGTG
TGTGCGTGTGTTTTTTTTTTTCTTTTTGCGGGCGGGGCCCGAGCGCTGAG
GAGGTGGGGGGGGGGGGGATGGGACGGCGGGGGCCGCTTATGTACGGCGT
TGGTATTGTCGCGCGCCTCCATGCATATATACATCGCCGAGAAGACGCAG
ATAGTTTTTTTTTCCTTCTTTTTTTTTCCCCTCCCTTTATTGGCTTAACT
ATTCGTCGTCTGCCCCACTGACCCCCTTCCTCCACTACGACTGTTGTAGC
TAGACGACCCAACCGGGGTCACAAAGGAGGGGAGGGGAGGGGGGGAGGTG
GACCCCCCCCCGCGGTGCCCGCCTGTTGTGTTTTATATCGCGAGAAGGCA
GGGTTCAGCACTCGCCAGACCCTCGTCAACAGTAAAGTCGAAGGAGTGTG
TGTCGCGTGGGCAGCAGCGGCGGTGGCGACGAGCTTTCAAGCGCGGTGGG
GCGGGTTCGCTTTTGCGCTCGGTTCTCCGTCGGGGGGCAGTTTTGATTGC
TAAACTCCGTATTAACATACACACATCTTAGGTATAAGTCAGCCTGTGAC
CACGGGAATTGACCGCATCAAGTGTTGGATTAGTACGGACATTGAGAGGT
ACTGGATGGAGAGATCGTAACGGTTTTTAATGTGAAGACAACATACATAC
ATACAAACATATACATATATATTAAAGAGCTCTGTTCCGCCGAGATCTCT
CTCTCTCTCTTCTAGACCTCTCTCTCTCTCTCTTCTACTGCATCTTCCCG
CGGGGCTCGTGTACGCGTGCGTTGGTTGCCAAGAGCCGCCTGAACAGATT
CCCCGGTGGGCGATGATAGAAACAACCTGGGGGGGAAAGCCGGGGGGGGC
GTGCGAGGCGATATCTTGATCCAACCGAAAAGTTGAGTTGCCGAGCGCGA
CCGAAAGCTACATACATGTGTACAAGCAGTGCACCGACGGTGGCACCGCC
ACCCTCTGTCCGTCGCCGTGAGAGCAGTTTCTTCGCCCACACAAACAAAT
AAAAGTCCCGTGAAACCCGCAGCTGTTTATTGATGTTTATTGATATGGTT
GCTGCTTGTATTGTCCAAAGGCTGCATGCAGCCCTTCGGCATCATCACGT
CTCCCGCCAACCCCCAGCCACACCGCCCTCCGTCGCCACTTTTCTCTCCC
ACGCTGACTGCTGTGTAGAAAAATCCTGCAGCAGCCCTTTGACATCACGC
CCCCCCCCCTCCCCTCCCCACGCCGCCCCTCCGTCGCGATTTTCTCGCCC
GCAAAAAAAAAAAAAAAAAGGGGGGGGGGCCGGCCCCCCCCCCCCTCTCC
GCCCCCCNNNNNNNNNNGCAGGAGCGGAGTGTGAGGACCGCGCCATCTTT
CACCTTCCTACGCCGCCCGCCGAGAGCGAGTCGCGCTCCAAAAAAAAAAA
AAAAAAAAGGTGGAGATGCAGTTCCAGCCCGCTCTCGACGCCTACGTCGC
TGGGCGGGAGGGAGGCGACCTGGCCGGCGCTGACGCCGAGCTAGCCAAGG
CCACGCAGTGGGAGGACCGCTGCGCCTTTCCTTTCGAGAACTTCCTGCCG
GTCTTTCACCTTGCCCGTAGTCGTGGCCTGCCGCTGGTGGCAATGGGGGT
CGAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig12092:871..5674+

>mRNA_L-elsbetiae_contig12092.1755.1 ID=mRNA_L-elsbetiae_contig12092.1755.1|Name=mRNA_L-elsbetiae_contig12092.1755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig12092:871..5674+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGGCACCGGTGTGATCACCGTTGTTCTCACTTTGTTGACCGCTCG
AGCTGGAGCTTTCGTGGCATCGCCTTTGTCCGGAGCTACCGATGCTTCAT
GCGTATCGCCTGCGGTTAGAAGCGGCGGGACCAGCAGTCTCGCAGAGCTT
CCCTACCAGCAGAGACACAGAAGGGAGCGGCAGCAGCAGCGGCAGCAGAA
GCCGAACATGATTTTGTTCTCATCGCGACAGCACCAGCAGCACACATCTC
AGCAGCGGCAGCGACGGCGGCGTGGCCGTGCTGGCTCTGATCACCTCCAA
GGTGGATCAACTTCCATCATGAACATGCACCCCGGCAGTAGCGAGGGCGA
GGATGAGGATCACCGACCACAACCAAGACTGCCACGAGAGCAACATAAGC
CACCAGGGCGTGGGCAGCAGACTCGTGCAGATTTTCTTCGAGCGGGGGCG
TCCTTGGCCGGCCTGACCGCTGTGGTCCTAGGAGCGCAACAGGAGATGAA
CGGCACCGGTGTGATCACCGTTGTTCTCACTTTGTTGACCGCTCGAGCTG
GAGCTTTCGTGGCATCGCCTTTGTCCGGAGCTACCGATGCTTCATGCGTA
TCGCCTGCGGTTAGAAGCGGCGGGACCAGCAGTCTCGCAGAGCTTCCCTA
CCAGCAGAGACACAGAAGGGAGCGGCAGCAGCAGCGGCAGCAGAAGCCGA
ACATGATTTTGTTCTCATCGCGACAGCACCAGCAGCACACATCTCAGCAG
CGGCAGCGACGGCGGCGTGGCCGTGCTGGCTCTGATCACCTCCAAGGTGG
ATCAACTTCCATCATGAACATGCACCCCGGCAGTAGCGAGGGCGAGGATG
AGGATCACCGACCACAACCAAGACTGCCACGAGAGCAACATAAGCCACCA
GGGCGTGGGCAGCAGACTCGTGCAGATTTTCTTCGAGCGGGGGCGTCCTT
GGCCGGCCTGACCGCTGTGGTCCTAGGAGCGCAACAGGAGGCGGCGCAAG
CGATCGACCTCGGCGGCGTCGAGTTCGGCTTCAAGAACAAGAACAAATTC
AACATTCCGGACGAGGACAACCCGGACCGGTTGCGGTCGCCCAGGCCGCT
CGCCTACCGCGTGGAGTTCACGGACCCTCCCACCACGGTTCCGTTCCCGC
GGGATTTCGAGGCGGCGCAAGCGATCGACCTCGGCGGCGTCGAGTTCGGC
TTCAAGAACAAGAACAAATTCAACATTCCGGACGAGGACAACCCGGACCG
GTTGCGGTCGCCCAGGCCGCTCGCCTACCGCGTGGAGTTCACGGACCCTC
CCACCACGGTTCCGTTCCCGCGGGATTTCGAGCCCAACCTTGTCAAGGAA
ATGTCGGGGCAGCGGCTGGTCTTCTTCGGCGTGCACGGGGAAGACTCCAG
AGATCCGGCGCTCACGGCGGACGTGATGGGCAAGATCTCTGCGAGGCTCG
AAGACAAGGCCGCCCCCAACCTTGTCAAGGAAATGTCGGGGCAGCGGCTG
GTCTTCTTCGGCGTGCACGGGGAAGACTCCAGAGATCCGGCGCTCACGGC
GGACGTGATGGGCAAGATCTCTGCGAGGCTCGAAGACAAGGCCGCCCGAG
TCGCGCTCCAAAAAAAAAAAAAAAAAAAGGTGGAGATGCAGTTCCAGCCC
GCTCTCGACGCCTACGTCGCTGGGCGGGAGGGAGGCGACCTGGCCGGCGC
TGACGCCGAGCTAGCCAAGGCCACGCAGTGGGAGGACCGCTGCGCCTTTC
CTTTCGAGAACTTCCTGCCGGTCTTTCACCTTGCCCGTAGTCGTGGCCTG
CCGCTGGTGGCAATGGGGGTCGACCGAGTCGCGCTCCAAAAAAAAAAAAA
AAAAAAGGTGGAGATGCAGTTCCAGCCCGCTCTCGACGCCTACGTCGCTG
GGCGGGAGGGAGGCGACCTGGCCGGCGCTGACGCCGAGCTAGCCAAGGCC
ACGCAGTGGGAGGACCGCTGCGCCTTTCCTTTCGAGAACTTCCTGCCGGT
CTTTCACCTTGCCCGTAGTCGTGGCCTGCCGCTGGTGGCAATGGGGGTCG
AC
back to top