mRNA_L-elsbetiae_contig12073.1741.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: D7FV70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV70_ECTSI) HSP 1 Score: 305 bits (782), Expect = 6.740e-103 Identity = 201/223 (90.13%), Postives = 208/223 (93.27%), Query Frame = 1 Query: 1 MPKGGRLVFKGGEVAVSSRGKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MRPVSGSGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAGGKRLVYRERTPAGNYRIIERTVDEAMSREEMLDMRATKKADRHCN 663 MPKGGRLVFKGGEVAVSSRGKKK XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX MRPVSG+GRITSSGTAVHGHEAKFMDELHSGDAILITHPTTL EETRI+KMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAE+ K+RK+Q E+DSAFGTYAGAGGKRLVYRERTPAGNYRIIE TVDEAM+REEMLDMRATKKADRHCN Sbjct: 1 MPKGGRLVFKGGEVAVSSRGKKKDKLXXXXXXXXXXXXXXSTGEAAXXXXXXXXXXXXXXXXXXEMRPVSGTGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLREETRIIKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEERKKRKVQ-EEDSAFGTYAGAGGKRLVYRERTPAGNYRIIETTVDEAMTREEMLDMRATKKADRHCN 222
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A835Z5I8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I8_9STRA) HSP 1 Score: 157 bits (397), Expect = 6.040e-45 Identity = 83/159 (52.20%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 190 MRPVSGSGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAGGKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHC 660 +RPV+G+GRI+SSGT V GH +FM EL +GDA+++THPT+L +ETR+V+MVLS+ +SS FS+DLISTT F+Y+ APR E AE A KR ++Q E+D AFGTY+ GG ++VYR + G Y I+ ++M+REE+L++R+ KKADR+C Sbjct: 34 LRPVAGTGRISSSGTVVTGHGTRFMSELRAGDALIVTHPTSLAQETRLVRMVLSDAHAGVSSAFSTDLISTTAFQYVSAPRGE--AEDPAVAAKRARLQ-EEDRAFGTYSSGGGSKVVYRVKKAGVYGGYEIVTADSKKSMTREELLNVRSKKKADRYC 189
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A7S2S051_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S051_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.660e-43 Identity = 90/158 (56.96%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAGGKRLVYRERTPA--GNYRI-IERTVDEAMSREEMLDMRATKKADRHC 660 V+G GRI++SGT VHGHE +FM +L GDA++ITHPTT+ +ETRIVKMVLS++S+SISSPFSSDLIST FR++KAP EV E E+ K++K+ + AFGTYAG G + VYRE+ G Y I +E T D SR ++L+MRA KKADR C Sbjct: 65 VAGKGRISTSGTTVHGHEGTQFMKQLKHGDAVIITHPTTMMDETRIVKMVLSDVSMSISSPFSSDLISTVEFRFVKAPEEEVDYEA-IENQKKQKLLDTEKEAFGTYAGDLGTKFVYREKKAGAFGGYAIRVEDTADR--SRTDLLEMRAGKKADRFC 219
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A7S2D383_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D383_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.810e-42 Identity = 88/157 (56.05%), Postives = 115/157 (73.25%), Query Frame = 1 Query: 202 SGSGRITSSGTAVHGHE-AKFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAGGKRLVYRERTPA--GNYRIIERTVDEA-MSREEMLDMRATKKADRHC 660 +GSGRI++SGT V GH+ ++FMDELH+GDAI++THP +L +ETRI+ MVLSN+S+++SS FSSDLIST++FR++ PR EV T AE KR+K + AFGTYAG G++ VYRER P G Y I EA SR E+L+MR+ KKADR C Sbjct: 39 TGSGRISTSGTIVTGHDGSRFMDELHNGDAIIVTHPASLIDETRIITMVLSNVSMNMSSAFSSDLISTSDFRFVNQPREEVD-HTIAESRKRQKRVDGEKDAFGTYAGDLGEKFVYRERKPGVYGGYYICSEDNGEAPKSRGELLNMRSKKKADRMC 194
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A024UEL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEL5_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.760e-42 Identity = 89/160 (55.62%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHCN 663 + G+GRI +SGT V G KF EL GDA++I HPT+L EETRIVKMVLS++S+SISSPFSSDL+STT F YIKAP EV + E KR K E+ SAFGTYAG G YR + G Y II+ T D SREE+LD+R+ +K DRHCN Sbjct: 53 LQGTGRILTSGTTVMGKMGTKFFHELSIGDALIINHPTSLKEETRIVKMVLSDVSVSISSPFSSDLVSTTTFWYIKAPPEEVDKDA-VESKKRSKKNDEEASAFGTYAGGTTAGTEFTYRVKKAGVYGGYAIIKETADANRSREELLDIRSKRKGDRHCN 211
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A6G0XV17_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV17_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.370e-41 Identity = 90/159 (56.60%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAG--GKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHC 660 + GSGRI +SGT V G +F EL GDA++I HPT+L EETRIV MVLS++SISISSPFSSDLISTT F YIKAP EV + + E KRRK +QE+ AFGTYAG G YR + G Y I++ T D SREE+LD+R+ KK DRHC Sbjct: 54 LQGSGRILTSGTTVMGKMGTRFSHELSIGDALIILHPTSLKEETRIVTMVLSDVSISISSPFSSDLISTTTFSYIKAPPEEVDKD-ELETKKRRKNEQEESFAFGTYAGGTTVGTEYTYRVKKSGAYGGYAIVKETADSNRSREELLDIRSKKKGDRHC 211
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: W4H648_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H648_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.520e-40 Identity = 84/160 (52.50%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAG--AGGKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHCN 663 + G+GRI +SGT V G KF EL GDA++I HPT++ EETRIVKMVLS++SISISSPFSSDL+STT F YIKAP E+ + E KR K +E+ AFGTYAG + G YR + G Y +++ T D SRE++LD+R+ +K DRHCN Sbjct: 52 LQGTGRILTSGTTVMGKMGTKFYHELSIGDALIIMHPTSMKEETRIVKMVLSDVSISISSPFSSDLVSTTTFSYIKAPPEEIDQDA-IETKKRSKKNEEETFAFGTYAGGTSAGSEFTYRVKKAGAYGGYAVLKETADANRSREDLLDIRSKRKGDRHCN 210
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A485LKB6_9STRA (Aste57867_21986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB6_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.360e-39 Identity = 83/159 (52.20%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHC 660 V G+GRI +SGT V G +F EL GDA++I HPT+L EETRI+ MVLS++S+SISSPFS+DL+STT F YIKAP+ EV E+ K+RK E+ AFGTYAG G YR + G Y I++ T D SRE++LD+R+ KK DRHC Sbjct: 55 VQGTGRILTSGTTVMGKMGTRFSHELSIGDALIIVHPTSLKEETRIITMVLSDVSVSISSPFSTDLVSTTTFSYIKAPKEEVDV-ADLENKKKRKKNDEELFAFGTYAGGTTAGTEFTYRVKKAGVYGGYAILKETADSNRSREDLLDIRSKKKGDRHC 212
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A7S3ZK63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZK63_9STRA) HSP 1 Score: 142 bits (359), Expect = 5.990e-39 Identity = 82/147 (55.78%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 202 SGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGAGGKRLVYRERTP-----AGNYRIIERTVDEAMSREEML 624 +GSGRI+SSGTAV GH+ +FM EL +GDA++ITHPTTL EETRIVKMVLS++SI+ISS FSSDL+STT FRY+ APR+E SA K D +R++ +ED A G YAG GG LVYR R + ++I+ + E +R E+L Sbjct: 67 AGSGRISSSGTAVRGHDGTRFMAELRAGDAVVITHPTTLTEETRIVKMVLSDVSIAISSAFSSDLVSTTAFRYVAAPRVEQSAADKERDAAQRRVLRED-GAVGDYAGGGGTTLVYRTRKKGAVGGSNGWKIVTEKLAEPKTRTELL 212
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Match: A0A1V9YA44_9STRA (Niemann-Pick C1 protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA44_9STRA) HSP 1 Score: 140 bits (352), Expect = 6.730e-38 Identity = 83/160 (51.88%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 199 VSGSGRITSSGTAVHGHEA-KFMDELHSGDAILITHPTTLGEETRIVKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEDGKRRKMQQEDDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIERTVDEAMSREEMLDMRATKKADRHCN 663 V G+GRI +SGT V G +F EL GDA++I HPT+L EETRIV+MVLS++SISISS FSSDL+STT F YIKAP + + E +++ + E+ AFGTYAG G +L YR + G Y II+ T D + SREE+LD+R+ K DRHCN Sbjct: 54 VQGTGRILTSGTTVMGKMGTRFASELSVGDAMIIVHPTSLQEETRIVRMVLSDVSISISSAFSSDLVSTTTFHYIKAP-PDXXXXAQKELATKKQKKDEEGFAFGTYAGGTTAGSQLTYRVKKSGVYGGYTIIKETADTSRSREELLDLRSKMKGDRHCN 212 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12073.1741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12073.1741.1 >prot_L-elsbetiae_contig12073.1741.1 ID=prot_L-elsbetiae_contig12073.1741.1|Name=mRNA_L-elsbetiae_contig12073.1741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp MPKGGRLVFKGGEVAVSSRGKKKDKIKRKRERALAKAHGEGAAGAAAGADback to top mRNA from alignment at L-elsbetiae_contig12073:2875..4447- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12073.1741.1 ID=mRNA_L-elsbetiae_contig12073.1741.1|Name=mRNA_L-elsbetiae_contig12073.1741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1573bp|location=Sequence derived from alignment at L-elsbetiae_contig12073:2875..4447- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12073:2875..4447- >mRNA_L-elsbetiae_contig12073.1741.1 ID=mRNA_L-elsbetiae_contig12073.1741.1|Name=mRNA_L-elsbetiae_contig12073.1741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1332bp|location=Sequence derived from alignment at L-elsbetiae_contig12073:2875..4447- (Laminarionema elsbetiae ELsaHSoW15)back to top |