mRNA_L-elsbetiae_contig12058.1731.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 353 bits (905), Expect = 6.390e-121 Identity = 184/202 (91.09%), Postives = 190/202 (94.06%), Query Frame = 1 Query: 4 ALEVPSAQLSGVAPDQRSNPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINKDAFRLQQEEGADIG 609 ALEVPS + V+P +RS+PQAMA+SAGEVEFYRLLRQEL KCSEFFTGVE QL VRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVV APFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTIN +AFRLQQ EGADIG Sbjct: 34 ALEVPSGKPE-VSPAKRSDPQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 234
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE) HSP 1 Score: 278 bits (710), Expect = 1.310e-91 Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 1 Query: 178 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINKDAFRLQQEEGADIG 609 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVN APFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTIN +AFRLQQ EGADIG Sbjct: 11 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 154
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.010e-59 Identity = 103/172 (59.88%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 43 PDQRSNPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLL-LPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAP-FVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTM 552 P+ S+P+A+++SAGEV F++ LRQEL KC EFF E+Q +VR+ARV EGWRQL +P V V+G KRLMAACV+LYKDLLLLENFAIMNY FSKILKKHDKLTGF TRE +MKNVVN+ F YP+V++ML VE LF+ I++ + + + EEQLFID M Sbjct: 52 PNGLSSPEALSKSAGEVAFFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHANIAHSS-------EEQLFIDAM 216
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.140e-48 Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 58 NPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINKDAFRLQQEEGADIG 609 NP+ +AQSAGEV F+R LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N++A +Q+EE AD+G Sbjct: 64 NPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.800e-48 Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 58 NPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINKDAFRLQQEEGADIG 609 NP+ +AQSAGEV F+R LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N++A +Q+EE AD+G Sbjct: 64 NPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.640e-38 Identity = 96/256 (37.50%), Postives = 137/256 (53.52%), Query Frame = 1 Query: 10 EVPSAQLSGVAPDQRSNPQ-AMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLP---------------------------NVVVEGNPNKR-LMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIES--------LPS----ASAEAGTR---------------VPLREE-QLFIDTMLTINKDAFRLQQEEGADI 606 ++ +A+ SG +P +R + A+A+ A E++F+ L EL K EF+ G E + +R +RV EG RQLL P V NP +R ++ACV++YKDLLLLE +AIM+YC FSKILKKHDK+TG+ TR +M VVN PF +Y V+KML E+LFK + + LPS + +AG R +PL EE QLFID + +N +A L ++E ++ Sbjct: 34 DMSAAKRSGASPKKRGRREVAIAEDALEIQFFSHLMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEV 289
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A7S0GC00_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC00_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.570e-37 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 79 SAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACV-KLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINKDAFRLQQEEGA 600 S GEV F++LL EL K FF+ E + +R+ RV E + PN ++ N ++A V +LYKDLLLLE FAIM+YC +SKILKKHDK+TG+ TR +FM NVVN A F YP +++M+S E L+ + L + + G +E+LF++ + +N+ A EEGA Sbjct: 63 SPGEVAFFKLLHGELKKAIRFFSKAEEEFAIREERVRESMIIMKKPNSIMLINDRWSVLAKSVYRLYKDLLLLETFAIMSYCAYSKILKKHDKVTGYETRVAFMSNVVNKANFTNYPNLVQMISRTETLYDEVSHLLESEGKQGL---YEDERLFLNMIHRLNEQALDTAGEEGA 234
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A7S2LY79_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY79_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.520e-37 Identity = 75/189 (39.68%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 46 DQRSNPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINKDAFRLQQEEGA-DIG 609 D R M+++ GEV F++LL EL K FF + + +R+ARV EG + N ++ + + +LYKDLLLLE +AIM YC FSKILKKHDK+TG TR +FMKNVVN A F YPK+++M++ +E++++ + ++G +E+LFI+ + +N+ ++EEGA D+G Sbjct: 106 DGRRAAAKMSRNPGEVAFFKLLNSELKKAIHFFDKAQLEFDIREARVREGTEIMKKANSLMVNEKWSLMAKSLYRLYKDLLLLETYAIMTYCSFSKILKKHDKVTGHNTRIAFMKNVVNKANFTHYPKLMQMITRIESMYEEVSQSLIDEGKSGL---YEDERLFINMIHRLNEQVLDTKEEEGAPDVG 291
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.010e-36 Identity = 76/185 (41.08%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 55 SNPQAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFV-QYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLR-EEQLFIDTMLTINKDAFRLQQEEGAD 603 ++ +++ +S GE +F++ L EL K SEFF E Q+V+R AR+ EG RQL V N ++ +MAAC+KLYKDLL+LEN+AI+N+CGFSKILKKHDK TGF TR+ FM N V+ + +Y + +++ E LF I + + T++ L+ +E++ I+++L + A R ++ D Sbjct: 62 TSKRSITESIGERDFFKALHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKI----SHTNTKLSLQTDERISIESILNLKFQAIRFKKSVCGD 242
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Match: A0A7S2A9F4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9F4_TRICV) HSP 1 Score: 141 bits (355), Expect = 1.560e-36 Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 64 QAMAQSAGEVEFYRLLRQELHKCSEFFTGVEAQLVVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNLAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINKDAFRLQQEEGA 600 Q++ +S GEV F++LL E K FF + + +R+ R+ EG + PN ++ L + +LYKDLLLLE FAIM YC FSKILKKHDK+TG+ TR +FM NVVN A F YP V+ M+S EAL++ + + + G +E+LFI+ + +N ++ EGA Sbjct: 139 QSIGKSPGEVAFFKLLHSEFKKAVHFFERAQEEFSIREGRIREGMEIMKKPNSIMVSEKWSLLAKSLHRLYKDLLLLETFAIMTYCSFSKILKKHDKVTGYETRNAFMTNVVNRANFTNYPDVLSMISRCEALYEEVSQHLISEGKEGL---CEDERLFINMIHRLNSQVMDTREAEGA 314 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12058.1731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12058.1731.1 >prot_L-elsbetiae_contig12058.1731.1 ID=prot_L-elsbetiae_contig12058.1731.1|Name=mRNA_L-elsbetiae_contig12058.1731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp QALEVPSAQLSGVAPDQRSNPQAMAQSAGEVEFYRLLRQELHKCSEFFTGback to top mRNA from alignment at L-elsbetiae_contig12058:1577..5626- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12058.1731.1 ID=mRNA_L-elsbetiae_contig12058.1731.1|Name=mRNA_L-elsbetiae_contig12058.1731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4050bp|location=Sequence derived from alignment at L-elsbetiae_contig12058:1577..5626- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12058:1577..5626- >mRNA_L-elsbetiae_contig12058.1731.1 ID=mRNA_L-elsbetiae_contig12058.1731.1|Name=mRNA_L-elsbetiae_contig12058.1731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig12058:1577..5626- (Laminarionema elsbetiae ELsaHSoW15)back to top |