mRNA_L-elsbetiae_contig1200.1705.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.490e-46 Identity = 85/138 (61.59%), Postives = 103/138 (74.64%), Query Frame = 3 Query: 327 VCDFEGRAALDP-EQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRYPGTEFKVTYRRPRLPDD 737 VCDF GRA P E + S LAACF SGSL+QHLV+TGL GAGPHL +L V+FS+ G + RAAGPM+VGED RVY AV+YP+M+ELWP++Y+ AV VV+VDVF+ VR + IRYPGTE KVTYRR R+ D Sbjct: 5 VCDFHGRAVAHPQESVVPSALAACFMSGSLEQHLVFTGLV-GAGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYRRTRMSPD 141
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE) HSP 1 Score: 127 bits (319), Expect = 4.970e-31 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 327 VCDFEGRAALDP-EQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEV 659 VCDF GRA P E + +S LAACF SGSL+QHLV+TGL GAGP L +L V+FS+ G + RAAGPM+VGED RVY AV++P+M+ELWP++Y+ AV VV+V +F + Sbjct: 14 VCDFHGRAVAHPQESVDSSALAACFMSGSLEQHLVFTGLV-GAGPDLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQVRLFPSI 124
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: A0A6H5L4C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C2_9PHAE) HSP 1 Score: 124 bits (311), Expect = 3.240e-30 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 3 Query: 342 GRAALDP-EQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEV 659 GRA P E + SPLA SGS +QHLV+T L+ GAGPHLA L VHFS+T GH +ERA GPM+V +DGRVY AV+ PS+SELWP++Y +++RVV+VDV+V V Sbjct: 6 GRAVAQPQESVDRSPLATFLLSGSREQHLVFTELD-GAGPHLAHLTPTVHFSITAGHSLERAGGPMQVRKDGRVYVAVKCPSISELWPEIYNNRSIRVVQVDVYVTV 111
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 119 bits (298), Expect = 7.850e-26 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 333 DFEGRAALDPEQLAASPLAACFSSGSLD--QHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRYPGTEFKVTYRRPR--LPDDGFVPWRP 758 DFEGR ++P + + SP AA FS D QHLV+ GL P L LAA FS G + ER GP++ G +GRVY AVQYPSM+ELWP+VY + A+RVV+VD+ VEVR + Y TE K YRRP + G + WRP Sbjct: 210 DFEGRT-IEPNKPSDSPFAAAFSVPRSDDEQHLVFIGLGETGRP-LPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPPGGSRNQGAL-WRP 352
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 112 bits (281), Expect = 4.590e-23 Identity = 70/148 (47.30%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 333 DFEGRAALDPEQLAASPLAACFSSGSLD--QHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEV--GEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRYPGTEFKVTYRRPR--LPDDGFVPWRP 758 DFEGR ++P + + SP AA S D Q+LV+ GL P L LAA FS G Q ER GP++ G +GRVY AVQYPSM+ELWP+VY +KA+RVV+VD+ VEVR + Y TE YRRP + G + WRP Sbjct: 292 DFEGRT-IEPNKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRP-LPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRRPSGGSRNQGAL-WRP 436
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 108 bits (269), Expect = 4.600e-21 Identity = 59/137 (43.07%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 330 CDFEGRAALDPEQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRYPGTEFKVTYRRPRLPDDG 740 CDFEGR + + P SS HLV+TGLNN G L L HF V H+V + P+++G +GR YA V YPSM E+WP++Y T +RVVEVD+ VE+R +Y G + KVTY R P D Sbjct: 384 CDFEGRPTPPTDPKSGEPPIP--SSTDRQCHLVFTGLNN-TGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPADA 517
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 2.050e-18 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 333 DFEGRAALDPEQLAASPLAACFSSGSLD--QHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRYPGTEFKVTYRRPRL 728 DF+GR+ SP A+ FS D Q+L +TGL + G L L A V FSV E GP++ G +GRVY A++YPSMSELWP++ T AVRVV+VD V++R ++ + G KVTYR+ ++ Sbjct: 476 DFDGRSYQPDNPPKDSPFASVFSVPCSDEAQYLAFTGLGH-TGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQAQV 608
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 4.740e-15 Identity = 56/146 (38.36%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 330 CDFEGRAALDPEQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQA-IRYPGTEFKVTYRR--PRLPDDGFVPWRP 758 CD EGR + + +P+ A S + H+ +TGL G L L F V HQ+ P+EVG DGR Y+ V YP M E+WP++Y T +R+VEVDV +E+ R+ G KV YRR P + D G V RP Sbjct: 116 CDLEGRP-ITRIGNSLTPITAS-SPDVRESHIEFTGLEK-TGHDLRGLRVTAIFGVDAVHQIACVTSPIEVGPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVDDGGDVSPRP 258
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 5.980e-15 Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 3 Query: 330 CDFEGRAALDPEQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQR-QAIRYPGTEFKV 707 CDFEGR P + ++ SS D H+V+TGLN+ G L V F V HQ+ P++V DGR Y+ V YPS+ E+WP++Y T VR VEVDV VEV + RY G KV Sbjct: 56 CDFEGRPL--PGGGSGMTPSSTVSSNGRDTHVVFTGLND-TGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.070e-14 Identity = 61/158 (38.61%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 270 YGAGSPGRAGETRT---GAI*AV----CDFEGRAALDPEQLAASPLAACFSSGSLDQHLVYTGLNNGAGPHLAFLAAAVHFSVTIGHQVERAAGPMEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQR-QAIRYPGTEFKVTYRR 719 +G G G A E R G + A+ CDFEGR P + ++ SS D H+V+TGL+N G L V F V HQ+ P++V DGR Y+ V YPS+ ++WP++Y T VR VEVDV VE+ + RY G KV Y R Sbjct: 207 HGFGGAGMAEERRLPIEGVVVALARKECDFEGRPL--PGGGSGMTPSSTVSSNGRDTHVVFTGLHN-TGHDPRGLRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTR 361 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1200.1705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1200.1705.1 >prot_L-elsbetiae_contig1200.1705.1 ID=prot_L-elsbetiae_contig1200.1705.1|Name=mRNA_L-elsbetiae_contig1200.1705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp MEVGEDGRVYAAVQYPSMSELWPDVYRTKAVRVVEVDVFVEVRLQRQAIRback to top mRNA from alignment at L-elsbetiae_contig1200:13812..18491+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1200.1705.1 ID=mRNA_L-elsbetiae_contig1200.1705.1|Name=mRNA_L-elsbetiae_contig1200.1705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4680bp|location=Sequence derived from alignment at L-elsbetiae_contig1200:13812..18491+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1200:13812..18491+ >mRNA_L-elsbetiae_contig1200.1705.1 ID=mRNA_L-elsbetiae_contig1200.1705.1|Name=mRNA_L-elsbetiae_contig1200.1705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=456bp|location=Sequence derived from alignment at L-elsbetiae_contig1200:13812..18491+ (Laminarionema elsbetiae ELsaHSoW15)back to top |