mRNA_L-elsbetiae_contig11996.1697.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI) HSP 1 Score: 191 bits (484), Expect = 3.240e-54 Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 1 Query: 1 KVTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRKVLSHYDEVKKDGAQLTLG 318 KVTHGA +FEAGDSVILTLKDQ LL+EDEHGRVTGLKDD+DELENVHMKEAERRKELDKEA+RAKRGAYQAYDDEEFEGEIGPGA+RKVLSHYDE KK+G +LTLG Sbjct: 285 KVTHGAASFEAGDSVILTLKDQGLLDEDEHGRVTGLKDDEDELENVHMKEAERRKELDKEAIRAKRGAYQAYDDEEFEGEIGPGAERKVLSHYDEAKKEGPRLTLG 390
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A7S3URM7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URM7_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 6.140e-18 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 KVTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFE--GEIGPGAKRKVLSHYDE 285 +V H EAG +V++TL+D +LE DEHG GL D D L NV++++ ER KEL ++ + RG YQ YDD EFE IGPGA+R VL+ YDE Sbjct: 150 EVAHDLKGLEAGGTVVMTLEDAEVLERDEHGVARGLADRTDRLMNVNLRDDERTKELLEKKRQTARGDYQGYDDAEFEEGAAIGPGARRAVLTKYDE 246
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A484E5T2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5T2_BRELC) HSP 1 Score: 77.4 bits (189), Expect = 2.280e-14 Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRKVLSHYDEV 288 V+H F G+ V+LTLKDQ +L+ D G+ L DD+DELENV ++EA+RR +A RA Y AYDD+EF E+G G KRK+L+ YD++ Sbjct: 185 VSHSIDHFNEGNEVVLTLKDQHVLKND--GKA--LNDDEDELENVELREADRRVAQQTQAKRAVMPVYCAYDDDEFL-ELGSGRKRKILAQYDDI 274
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A067C1I0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1I0_SAPPC) HSP 1 Score: 75.9 bits (185), Expect = 7.860e-14 Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRKVLSHYDE 285 V H A +FE G+ VILTLKD +L +D + + D DDELENV + EA++RKE ++ A RA Y +DDEEF +G K+++L+ YDE Sbjct: 193 VAHDAQSFEEGEDVILTLKDNRILTDD----MGNVNDADDELENVTLTEADKRKEREEMAKRAAGPVYSGFDDEEFSTVLGDRPKKRLLTQYDE 282
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A067BGK3_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGK3_SAPPC) HSP 1 Score: 74.7 bits (182), Expect = 1.090e-13 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRKVLSHYDE 285 V H A +FE G+ VILTLKD +L +D + + D DDELENV + EA++RKE ++ A RA Y +DD+EF +G K+++L+ YDE Sbjct: 193 VAHDAQSFEEGEDVILTLKDNRILTDD----MGNVNDADDELENVTLTEADKRKEREEMAKRAAGPVYSGFDDDEFSTVLGDRPKKRLLTQYDE 282
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A1V9Y503_9STRA (U4/U6.U5 tri-snRNP-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y503_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.850e-13 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRKVLSHYDEVKK 294 V H A AFE G+ VILTLKD +L +D + + D DDELENV + EA++RKE +++A RA Y +DD+EF G +++L+ YDE ++ Sbjct: 116 VAHDAHAFEEGEEVILTLKDTRILTDD----MAAVNDADDELENVTLAEADKRKEREEQAKRAAGPVYSGFDDDEFTTVGGDRPTKRLLTQYDEEEE 208
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A485L1Q9_9STRA (Aste57867_14843 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1Q9_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.500e-12 Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGA--KRKVLSHYDE 285 V H A AF+ G+ VILTLKDQ +L G + + +D DELENVH+ E +RR E + +A Y +DD+EF IG A K+++L+ YDE Sbjct: 192 VAHDARAFDEGEDVILTLKDQRILT----GDLNDVNEDGDELENVHISEMDRRAEREARMKKASGPVYSGFDDDEFTSVIGGKAPLKKRLLAQYDE 283
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: A0A024TXF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXF0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 8.450e-12 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKR------KVLSHYDEVKK 294 V H A AFE GD VILTLKDQ +L +D +G+ D+ DELENV ++EA+ R E D +A Y +DD+EF +G G+K+ ++L+ YDE ++ Sbjct: 232 VAHDAHAFEEGDEVILTLKDQRVLTDDR----SGVNDESDELENVDLREADSRAERDARMKKATGPVYSGFDDDEFTTILG-GSKKGVRKPVRLLAQYDEEEE 329
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: W4G1G8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1G8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.460e-11 Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 4 VTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKRGAYQAYDDEEFEGEIGPGAKRK----VLSHYDE 285 V H A AFE GD VILTLKDQ +L +D + + D DELENV M++ +RR E + RA Y +DD+EF +GP K +L+ YDE Sbjct: 225 VAHDARAFEEGDEVILTLKDQRVLTDDRND----VNDGGDELENVDMRDEDRRLEREARLKRASGPVYSGFDDDEFTTILGPKKATKKTVRLLAQYDE 318
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Match: F4RU14_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RU14_MELLP) HSP 1 Score: 67.0 bits (162), Expect = 1.030e-10 Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 1 KVTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEAERRKELDKEAVRAKR-GAYQAYDDEEFEGEIGPGAKRKVLSHYDE 285 KV H FE GD V+LTLKD +L+E+ DDELENV+MKEA R +EL + K G Y YDD+EF + PG ++LS Y+E Sbjct: 143 KVAHQVDEFEQGDEVVLTLKDNRILDEE-----------DDELENVNMKEAARDQELLSLKKKGKSAGQYTGYDDDEF---LNPGQSNQILSKYNE 224 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11996.1697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11996.1697.1 >prot_L-elsbetiae_contig11996.1697.1 ID=prot_L-elsbetiae_contig11996.1697.1|Name=mRNA_L-elsbetiae_contig11996.1697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp KVTHGAGAFEAGDSVILTLKDQALLEEDEHGRVTGLKDDDDELENVHMKEback to top mRNA from alignment at L-elsbetiae_contig11996:1184..4963+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11996.1697.1 ID=mRNA_L-elsbetiae_contig11996.1697.1|Name=mRNA_L-elsbetiae_contig11996.1697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3780bp|location=Sequence derived from alignment at L-elsbetiae_contig11996:1184..4963+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11996:1184..4963+ >mRNA_L-elsbetiae_contig11996.1697.1 ID=mRNA_L-elsbetiae_contig11996.1697.1|Name=mRNA_L-elsbetiae_contig11996.1697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig11996:1184..4963+ (Laminarionema elsbetiae ELsaHSoW15)back to top |