mRNA_L-elsbetiae_contig11989.1693.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11989.1693.1
Unique NamemRNA_L-elsbetiae_contig11989.1693.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: D7G583_ECTSI (Acetylornithine transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G583_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 4.080e-140
Identity = 213/269 (79.18%), Postives = 230/269 (85.50%), Query Frame = 1 
Query:   34 AAALLVGGSDGFVSSSSFLGAMSQQAAAVKDHQVLSMVSTPPKPS-GSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQVSPSGPPSPPQ 837
            A A +VGG+DGF +SSS     +      +  Q  SMVSTPP PS  ST S PL+QDQFNAYVQ+TYGRYPLTIV GEGCKLFDS+GKEYLDFVAGISTCALGHAD DLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEA IKLARK+A TKLGI EPVI+TAK+SFHGRT+AT+TATGQP YQ+NFGPL+PGFEYATYND EDLKRVVKRINRR KIRSLFGRPRR VAAIMMEALQ      P+ P+
Sbjct:    8 AGAFVVGGTDGFAASSSAFSGGNMLHHGPRSSQAFSMVSTPPTPSTASTSSAPLTQDQFNAYVQNTYGRYPLTIVRGEGCKLFDSDGKEYLDFVAGISTCALGHADSDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAGIKLARKHASTKLGIAEPVIVTAKKSFHGRTLATMTATGQPNYQKNFGPLVPGFEYATYNDPEDLKRVVKRINRRGKIRSLFGRPRRAVAAIMMEALQGEGGVVPATPE 276
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BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: A0A835ZAE5_9STRA (Acetylornithine transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE5_9STRA)

HSP 1 Score: 339 bits (869), Expect = 1.830e-110
Identity = 171/251 (68.13%), Postives = 203/251 (80.88%), Query Frame = 1 
Query:   52 GGSDGFVSSSSFLGAMSQQAAAVKDHQVLSMVSTPPKPSGSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            G SD F SS   +   S+Q      H  L+MV+TP  P  S+ + PL+ D+++ YVQ+TYGRYPLTIV G+GC L D +GKEYLD VAGISTCALGHADP+L +AV  QM + HH+SNLYYIPEQG+LAKWLV+NSCADRVFFCNSGAEANEA IKLARKYAHT LG+D PVIITA+QSFHGRT+AT+TATGQPKYQ++FGPL  GFEY TYND +DL+  VKRIN R+K+R+L G P+RGVA I+MEALQ
Sbjct:   20 GSSDAFTSSP--VAHTSKQ----HRHSTLTMVATPEAPQVSSAA-PLTMDEYSKYVQTTYGRYPLTIVRGKGCHLVDKDGKEYLDMVAGISTCALGHADPELTSAVSAQMSRMHHISNLYYIPEQGRLAKWLVENSCADRVFFCNSGAEANEAQIKLARKYAHTVLGLDLPVIITARQSFHGRTLATVTATGQPKYQKDFGPLPSGFEYVTYNDIDDLRATVKRINGRAKLRALLGLPKRGVAGILMEALQ 263
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BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: A0A6V1MZH1_HETAK (Acetylornithine transaminase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MZH1_HETAK)

HSP 1 Score: 289 bits (740), Expect = 2.400e-91
Identity = 136/203 (67.00%), Postives = 169/203 (83.25%), Query Frame = 1 
Query:  196 QDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            Q+QF + V +TYGRYP+ I  G+GC+L  + GKEYLDFVAGISTCALGHA+  +  AV DQMKK HHVSNLYYIP QG+LA+ LV+ SCADRVFFCNSGAEANEAAIKLARKY HT+LG+DEP+IITA  SFHGRT+AT+TAT QPKYQ++FGP++PGF +AT+ND  +L+ +V+ +NR+    + FGRPR GVAA+++E LQ
Sbjct:   42 QEQFQSNVMTTYGRYPIAIKEGKGCRLVSTEGKEYLDFVAGISTCALGHANQRMIDAVTDQMKKVHHVSNLYYIPGQGELAQKLVEKSCADRVFFCNSGAEANEAAIKLARKYGHTQLGLDEPLIITAHASFHGRTLATITATAQPKYQQDFGPMVPGFHHATFNDLGELQELVRALNRQGAQAAQFGRPRAGVAAVLLEPLQ 244
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BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: A0A651E731_9CYAN (Acetylornithine aminotransferase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651E731_9CYAN)

HSP 1 Score: 278 bits (712), Expect = 1.270e-87
Identity = 132/214 (61.68%), Postives = 165/214 (77.10%), Query Frame = 1 
Query:  163 PSGSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            PS  T  IP + D F+ YV STYGR+PL +  GEGC+++D++G+EYLDFVAGI+TC LGHA P +  A+  Q++  HHVSNLYY+P QGQLA+WLV++SCADR FFCNSGAEANE AIKLARKYAHT LGI+EPVI+TA+ SFHGRT+AT+TATGQPKYQ+NF PL+PGF Y  YND   L++ +  +++            R VAAIM+EALQ
Sbjct:    8 PSLGTAQIPFTSDGFDQYVMSTYGRFPLALERGEGCRVWDTDGREYLDFVAGIATCTLGHAHPAMVEAISQQIRTLHHVSNLYYVPSQGQLAQWLVEHSCADRAFFCNSGAEANEGAIKLARKYAHTVLGIEEPVILTAQASFHGRTLATVTATGQPKYQKNFSPLVPGFHYVPYNDIPALEQAIADLDQGE----------RRVAAIMLEALQ 211
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BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: K8YRG0_NANGC (Acetylornithine transaminase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRG0_NANGC)

HSP 1 Score: 279 bits (714), Expect = 3.280e-87
Identity = 140/215 (65.12%), Postives = 166/215 (77.21%), Query Frame = 1 
Query:  163 PSGSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRS-LFGRPRRGVAAIMMEALQ 804
            P  +   +P     F   + +TYGRYP+T+V G+G KL+DS GKEYLDFVAGISTC LGHA+P L AAV +Q+ K HHVSNLYY  EQG+L  WLV++S AD+VFFCNSGAEANEAAIKLARK+AH KLG+ EPVIITAK SFHGRT+A +TATGQPKY   F PL+PGF Y  YNDA  L+R V+RIN   ++R  L G+ RRGVAAI+MEALQ
Sbjct:   51 PENAARPLPAEAAVFAQNIMATYGRYPITMVKGQGVKLWDSTGKEYLDFVAGISTCCLGHANPGLTAAVTEQLGKLHHVSNLYYTAEQGRLGAWLVEHSVADKVFFCNSGAEANEAAIKLARKHAHEKLGLGEPVIITAKASFHGRTLAAITATGQPKYHRGFEPLVPGFVYVDYNDAGALERTVRRINFWGRLRGWLPGKKRRGVAAILMEALQ 265
[Close]
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: M1VG10_CYAM1 (Acetylornithine transaminase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VG10_CYAM1)

HSP 1 Score: 279 bits (713), Expect = 6.830e-87
Identity = 132/203 (65.02%), Postives = 160/203 (78.82%), Query Frame = 1 
Query:  202 QFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRIN--RRSKIRSLFGRPRRGVAAIMMEALQ 804
            +F+ YVQ+TY RYPLT+V G G K+ D NG+ Y+D VAGI+TC+LGHADP L +AV DQ+++ HHVSNLYY  EQ  LAKWLV++SC DRVFFCNSGAEANEAA+KL RKYAHT+LG+D PV++TA  SFHGRT+AT+TATGQPKYQ  F PL+PGF Y  YND   L+RVV  +   R S  R + G PR G+AAIM+EALQ
Sbjct:   78 EFDRYVQNTYARYPLTLVSGRGSKVVDDNGRTYIDCVAGIATCSLGHADPRLVSAVSDQIRRLHHVSNLYYTVEQASLAKWLVEHSCGDRVFFCNSGAEANEAALKLVRKYAHTQLGLDVPVVVTAMNSFHGRTLATITATGQPKYQRGFEPLMPGFRYVPYNDVAALERVVNELEQMRNSWWRRIQGAPRTGLAAIMLEALQ 280
[Close]
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: A0A2W4U0S4_9CYAN (Acetylornithine aminotransferase n=1 Tax=Leptolyngbya foveolarum TaxID=47253 RepID=A0A2W4U0S4_9CYAN)

HSP 1 Score: 276 bits (705), Expect = 1.980e-86
Identity = 129/201 (64.18%), Postives = 157/201 (78.11%), Query Frame = 1 
Query:  202 QFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            QF+ +V +TYGR+P+ +  GEGC+L+DS G+EYLDFVAGI+TC LGHA P + AA G+QMKK HHVSNLYYIPEQG LA+WL  +SCADRVFFCNSGAEANE AIKLARKY HT+LGI+ P++ITAK SFHGRT+AT+TATGQPKYQ+NF PL+PGF Y  YND E LK  +  ++             R VAAI++E +Q
Sbjct:   30 QFDQHVMATYGRFPIALERGEGCRLWDSEGREYLDFVAGIATCTLGHAHPKMIAAAGEQMKKLHHVSNLYYIPEQGALAQWLTKHSCADRVFFCNSGAEANEGAIKLARKYGHTELGIEAPIVITAKASFHGRTLATVTATGQPKYQKNFNPLVPGFHYVPYNDIEALKATIAELDAEQ----------RQVAAILLEPMQ 220
[Close]
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: A0A6U1PT46_9STRA (Acetylornithine transaminase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PT46_9STRA)

HSP 1 Score: 275 bits (703), Expect = 5.910e-86
Identity = 139/203 (68.47%), Postives = 156/203 (76.85%), Query Frame = 1 
Query:  196 QDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            Q+++ + V STYGRYP+TI  G+GCKL    GKEYLDFVAGISTCALGHAD  L  A+  QM+K HHVSNLYYIPEQ  LA+ LV NSCADR FFCNSGAEANEAAIKL RKYA T+ G+  PVIITA  SFHGRT+A +TATGQPKYQ+NFGPL PGFEYATYNDAE L+ +VK+IN             R VA IMMEALQ
Sbjct:   40 QEKYQSNVMSTYGRYPITIKEGKGCKLVSVEGKEYLDFVAGISTCALGHADDRLIEAITKQMQKVHHVSNLYYIPEQADLAELLVKNSCADRAFFCNSGAEANEAAIKLCRKYAATEKGVKSPVIITALDSFHGRTLAAITATGQPKYQQNFGPLPPGFEYATYNDAEGLRSLVKKINEDGASEG------RKVAGIMMEALQ 236
[Close]
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: K9Z8S9_CYAAP (Acetylornithine aminotransferase n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9Z8S9_CYAAP)

HSP 1 Score: 273 bits (699), Expect = 1.050e-85
Identity = 135/211 (63.98%), Postives = 160/211 (75.83%), Query Frame = 1 
Query:  175 TVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLG-IDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            T     SQD FN YV +TYGR+P+ I  GEGCKL+D+  KEYLDFVAGI+TC LGHA P L  AV  Q+KK HH+SNLYYIPEQG+LAKW+VD+SCAD+VFFCNSGAEANEAAIKL RKYAHT L  +++PVI+TAK SFHGRT+AT+TATGQPKYQ+NF PL+PGFEY  YND   ++  +  I+             R VAAIM+E LQ
Sbjct:    8 TTKTGFSQDTFNQYVMNTYGRFPVAIEKGEGCKLWDTEDKEYLDFVAGIATCTLGHAHPALVEAVTKQIKKLHHISNLYYIPEQGELAKWIVDHSCADKVFFCNSGAEANEAAIKLVRKYAHTVLEFLEQPVILTAKSSFHGRTLATITATGQPKYQKNFEPLVPGFEYVPYNDITAIEEAITDIDEGD----------RRVAAIMIEPLQ 208
[Close]
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Match: UPI0016881BE0 (Aspartate aminotransferase family protein n=15 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI0016881BE0)

HSP 1 Score: 273 bits (698), Expect = 1.920e-85
Identity = 133/221 (60.18%), Postives = 162/221 (73.30%), Query Frame = 1 
Query:  142 MVSTPPKPSGSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDFVAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNSCADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMATLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFGRPRRGVAAIMMEALQ 804
            +V  P  P+ S VS+P   + F+A V STYGRYPL +  G GC+L+DS G+EYLDFVAGI+TC LGHA P L   V  Q++  HHVSNLYYIP QG+LAKWL+D+SCADR FFCNSGAEANE AIKLARKYAHT  GI++P+I+TA  SFHGRT+AT+TATGQPKYQ+NF PL+PGF Y  YND   +K  +  ++   +          GV AIM+EALQ
Sbjct:    6 LVENPSIPAESGVSVPYDPEGFDASVMSTYGRYPLALERGAGCRLWDSEGREYLDFVAGIATCTLGHAHPALVETVTRQIQTLHHVSNLYYIPVQGELAKWLIDHSCADRAFFCNSGAEANEGAIKLARKYAHTVKGIEKPIILTAHASFHGRTLATITATGQPKYQKNFAPLMPGFYYVPYNDIGAIKNAIATLDEGDQ----------GVTAIMLEALQ 216
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11989.1693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G583_ECTSI4.080e-14079.18Acetylornithine transaminase n=2 Tax=Ectocarpus Ta... [more]
A0A835ZAE5_9STRA1.830e-11068.13Acetylornithine transaminase n=1 Tax=Tribonema min... [more]
A0A6V1MZH1_HETAK2.400e-9167.00Acetylornithine transaminase n=1 Tax=Heterosigma a... [more]
A0A651E731_9CYAN1.270e-8761.68Acetylornithine aminotransferase n=3 Tax=Cyanobact... [more]
K8YRG0_NANGC3.280e-8765.12Acetylornithine transaminase n=3 Tax=Monodopsidace... [more]
M1VG10_CYAM16.830e-8765.02Acetylornithine transaminase n=1 Tax=Cyanidioschyz... [more]
A0A2W4U0S4_9CYAN1.980e-8664.18Acetylornithine aminotransferase n=1 Tax=Leptolyng... [more]
A0A6U1PT46_9STRA5.910e-8668.47Acetylornithine transaminase n=1 Tax=Fibrocapsa ja... [more]
K9Z8S9_CYAAP1.050e-8563.98Acetylornithine aminotransferase n=5 Tax=Cyanobact... [more]
UPI0016881BE01.920e-8560.18Aspartate aminotransferase family protein n=15 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11989contigL-elsbetiae_contig11989:982..4690 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score417.9
Seed ortholog evalue4.4e-114
Seed eggNOG ortholog2880.D7G583
KEGG rclassRC00006,RC00062
KEGG koko:K00818
KEGG ReactionR02283
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EggNOG OGsCOG4992@1,KOG1401@2759
EC2.6.1.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Ec32 ortholog descriptionacetylornithine aminotransferase
Ec32 orthologEc-14_006580.1
Exons6
Model size1026
Cds size1017
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815397.9326859-UTR-L-elsbetiae_contig11989:981..9901622815397.9326859-UTR-L-elsbetiae_contig11989:981..990Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11989 982..990 +
1691682878.6548257-UTR-L-elsbetiae_contig11989:981..9901691682878.6548257-UTR-L-elsbetiae_contig11989:981..990Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11989 982..990 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815397.9455197-CDS-L-elsbetiae_contig11989:990..11131622815397.9455197-CDS-L-elsbetiae_contig11989:990..1113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 991..1113 +
1691682878.6666186-CDS-L-elsbetiae_contig11989:990..11131691682878.6666186-CDS-L-elsbetiae_contig11989:990..1113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 991..1113 +
1622815397.9596753-CDS-L-elsbetiae_contig11989:1367..15291622815397.9596753-CDS-L-elsbetiae_contig11989:1367..1529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 1368..1529 +
1691682878.6749868-CDS-L-elsbetiae_contig11989:1367..15291691682878.6749868-CDS-L-elsbetiae_contig11989:1367..1529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 1368..1529 +
1622815397.9718199-CDS-L-elsbetiae_contig11989:1858..19901622815397.9718199-CDS-L-elsbetiae_contig11989:1858..1990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 1859..1990 +
1691682878.6829333-CDS-L-elsbetiae_contig11989:1858..19901691682878.6829333-CDS-L-elsbetiae_contig11989:1858..1990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 1859..1990 +
1622815397.9881966-CDS-L-elsbetiae_contig11989:3146..32391622815397.9881966-CDS-L-elsbetiae_contig11989:3146..3239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 3147..3239 +
1691682878.6911712-CDS-L-elsbetiae_contig11989:3146..32391691682878.6911712-CDS-L-elsbetiae_contig11989:3146..3239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 3147..3239 +
1622815397.9990082-CDS-L-elsbetiae_contig11989:3781..39291622815397.9990082-CDS-L-elsbetiae_contig11989:3781..3929Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 3782..3929 +
1691682878.7019987-CDS-L-elsbetiae_contig11989:3781..39291691682878.7019987-CDS-L-elsbetiae_contig11989:3781..3929Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 3782..3929 +
1622815398.0094066-CDS-L-elsbetiae_contig11989:4331..46901622815398.0094066-CDS-L-elsbetiae_contig11989:4331..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 4332..4690 +
1691682878.7150419-CDS-L-elsbetiae_contig11989:4331..46901691682878.7150419-CDS-L-elsbetiae_contig11989:4331..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11989 4332..4690 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11989.1693.1prot_L-elsbetiae_contig11989.1693.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11989 991..4690 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11989.1693.1

>prot_L-elsbetiae_contig11989.1693.1 ID=prot_L-elsbetiae_contig11989.1693.1|Name=mRNA_L-elsbetiae_contig11989.1693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
MYALGLGFAAALLVGGSDGFVSSSSFLGAMSQQAAAVKDHQVLSMVSTPP
KPSGSTVSIPLSQDQFNAYVQSTYGRYPLTIVGGEGCKLFDSNGKEYLDF
VAGISTCALGHADPDLAAAVGDQMKKFHHVSNLYYIPEQGQLAKWLVDNS
CADRVFFCNSGAEANEAAIKLARKYAHTKLGIDEPVIITAKQSFHGRTMA
TLTATGQPKYQENFGPLLPGFEYATYNDAEDLKRVVKRINRRSKIRSLFG
RPRRGVAAIMMEALQVSPSGPPSPPQATPGVSALLGFRLLHMYIRPEHHA
VSRPDAPSRPCPTGSKCSEEETGGRLRCGSRGGGGGGFL
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mRNA from alignment at L-elsbetiae_contig11989:982..4690+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11989.1693.1 ID=mRNA_L-elsbetiae_contig11989.1693.1|Name=mRNA_L-elsbetiae_contig11989.1693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3709bp|location=Sequence derived from alignment at L-elsbetiae_contig11989:982..4690+ (Laminarionema elsbetiae ELsaHSoW15)
TTCAAGACCATGTACGCCTTAGGGTTAGGGTTTGCTGCAGCCTTGCTGGT
CGGTGGAAGCGATGGCTTCGTGTCGTCGTCATCATTTTTGGGCGCCATGT
CGCAGCAAGCCGCTGCCGTGAAAGACCACCAGGTGAGGTACAGACATGCA
CGCCGCTACGCTACTGCTCGGGGGTGTGCTGGGGATGAGTTGACTGCCCT
CGTTGCTGCCTGCCCTGCGTCGGTTTTGTGGGTGCCGTTTGTGGCTATCT
GCACTGCTGTCTGTTTCTAGGTTTCGATACCCCCAATTGTGCATGTTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTGTATGTCTCTCTCTTCCT
TTGCTTCTTCTTCTTCCGTCCTCGCTCGCTCGCCAGGTCTTGTCCATGGT
GTCGACTCCCCCGAAACCTTCCGGCTCCACGGTGAGCATCCCACTTTCGC
AGGACCAGTTCAACGCCTACGTTCAGAGCACGTACGGGAGGTATCCGCTC
ACGATCGTGGGCGGCGAGGGGTGCAAGCTCTTCGACTCCAATGGAAAGGT
ATTTGTAGACCAATCCCTTGGAATGTGCGCGTAAAACTGTTTTGGAAAAT
CAGGGTGGCCGTGTGCGTTCAGGGTGACTCGCTCCAATCTGTTCCGGGGC
AAATGTGCTGTATTTTGAACCTTTGAAAAATCGGAAAATACAAAAATACA
GCCTCAAGTACGCCGTTTTTGTTTTCTCTCTCTCGTGGGACAAGGAGACG
GGCTTCGCTTCCCTCATTCCATCTGCGTACTTTCATATGTGTGCACGCTG
CGCTCACTTCTCTCCACCGCCCCCCCCCTCCCCTCTACTGCGCTTCTCCC
CGATCTGTACCCGCGCTCGCCGAGCAGGAGTACCTCGATTTTGTTGCGGG
GATCTCGACCTGCGCTCTCGGCCACGCAGACCCCGACCTCGCAGCGGCGG
TAGGAGACCAGATGAAGAAGTTCCATCACGTCAGCAACCTCTACTACATC
CCGGAGCAGGTGCAAAAGTCTGGATTAGTTTGTGTCGCTGGTGGTTTGAG
TAACAGCTGCGGCATCAGTTTGTCTAAAACCTTTGCTTTCGGAAATGCCC
GGAGGGGAGAGAGGGCTAGACCCGCTTACGGCTCATCTGCACCGTGTGGG
TTTGCCGTCCCACTTTACTATGCATTCCTTTAGAGTCGGGGGTTCCGTAG
TCAAGTCCACGGAAGGGACGGCAATGGATGCGATTATGCAGATCGGGGGG
TGGCGTACGGAGAGGGTGGCTTCGCGCTACATCGGAGCTACGACCAGCGG
AGCCGCCCCAGGCTCCAAGCGGAGGCAGAGTGAGCTCTATGCGGACTCTA
GCGAGTTGCCGTTGTCTGCGGAGTTCACTCGAAAAATTTCCGCATGCGCG
CGGAAATGAGGATTTGATGTGTATGATTTAACGCAAGTTTGGGGGACATC
CGAGTGGCAGTGGTCAGAAAAGCACCAGGTAAGAAAGTATAGGCGGGACC
ACCGCCTGGTGCACAAGGCCTCACCCAAGAAATCCAATACTTACACTGAA
TGATCCGGGTAAGGGACAATAATACAACAGTAATCTCGAGAAGCTACGAA
TTTTCGGTTTCGGAACGAAACCCGAAAAAGGCGTGCAAGGCGGGAAAATA
TGTTGTAAAATGAATCGCCACAGAATCAGTGCATTTTATCCTCCCGTAAA
TACCTGGGAGCAGAGGAGGTATGATATATTTTGAGACCATCCCTCCCACC
CTGCAAGTTTGTGTTCATGTCATTACTGATCGTTCAAACATTCCCCGTGC
TGACGTACACCATCTAATGGGCATCAGCACGGGGGTTGTTACAAAGGCGA
GGAGGCGAGGCCAGGAGGCCTCACCCAAGAAATCCAATACTTACACTGAA
TGATCCGGGCAAGGGACAAGAATACAACAGGAAGCTACAGATATATGTAG
GTCGTCGCTCACCCGTGTAAAAGCGCACAATTTTGTGGTGTGTTGCATGG
CGCACCAGCCCCGCTGGCACTCGTCATATCAATGTGTTTCAATAATACAA
GCACAGAGTTAGTTGTGCAAGCCATCGCGGCGAAGTCGATCGTCGTCGAA
TCTCGTTTGGATGAGAGTGCCTCCCCCCTCCTGCCTGCCATGCCTGTCGT
GCCCGCGCCGAGTAGGGGCAGCTGGCGAAGTGGCTGGTGGACAATAGCTG
CGCGGACCGCGTCTTCTTCTGCAACTCTGGAGCTGAGGCCAACGAGGCGG
CCATCAAGGTGCGGCTTCCTTCCACAAGTCGACGACGAGTTTCACCGCTT
TCCCACTTGCGTGCTCGCGTAATCGGCGGAGAGAGGGTTACTGCAAGCGT
TGGGGTGATGCTGATCCTCGGACGTGCTGTGCCAACGGCGCCGAGACGAC
AGACAATAACAGTAGTCGCCTAGATGCATGCGGTAGAAGCTAAGATAGAT
AGAAAACCCCTCCTGACTACGTCGCACCTCCATCTGAATGGAAGAAAGAG
GACGCGCGTACATATGCATGAAGGATGCGACTCTGCAGAGCCCCCCGTGG
TCCGTTTTTTGTCTTCCCTCCCGTGCCCACGCAAGCCGGAACAACCGCCA
TGGGAAAAAGGGCGGGAGACAGCAGGAGTCGCTCCATCCTAAGGGCGTGG
TAGTGTACATAGCTTTGCCGTGATATCTGGGCGCCACGCGACTCTCGTGA
CCGCCTCTCTAAATAAACAACGAAGCTTCCTCTTTTTCGCCATCCTCCCC
CCCCCCCTCCCCGTTCCTCGATGCTGTTTCGACGCCATCCTCCTCGTCAG
CTGGCCCGGAAATACGCCCACACCAAGCTGGGCATCGACGAGCCGGTCAT
CATTACCGCCAAGCAATCGTTCCACGGCCGGACTATGGCCACGCTCACGG
CCACGGGACAGCCCAAGTACCAGGAGAACTTCGGGCCGCTTCTGCCAGGT
GAGACACGCAGGCGGTGGGTGGGCGACGCACACCATTTTGTGTGTGTGTC
TTTCGACGATTACAATTACACCACGTTCGTCGTGGTTTTTGAAGTTGCCG
GTGCGTGCGAGTGGGGTGCTCATGGCATGTTTTTGATAACCCTTTGGCTT
GGGTGTCGCGGCAGAGCTTTTTCCGTGCTGGTTTGCTGGCGCGGTGTGCC
GCCCTTGCGGATTGTGTCGGGTCAAGCCACAGCGAAAATACAGAAATACG
TCCACCAGGGAGAAACAGTAGTGCTTTGCGCGATTCCCGCGATTGGTGCA
TATATACACGACCACGTTTGTGTATGCCTACATAAGCATCGCTTTGCTGG
TATATTTGCCGTGTCCTCAAAACGATTCTGTGTTATTTATCGCGTGAAAG
GGTTTGAGTACGCCACCTACAACGATGCGGAGGACCTGAAGCGGGTGGTG
AAGCGCATCAACCGGCGGAGCAAGATCCGGTCCCTCTTCGGCCGACCTCG
TCGAGGGGTCGCCGCTATCATGATGGAGGCGTTGCAGGTCAGTCCGTCCG
GTCCGCCCAGCCCCCCGCAAGCTACACCGGGCGTGAGTGCCCTGCTCGGT
TTCCGACTGCTACATATGTATATCAGACCAGAGCATCACGCGGTATCACG
CCCCGATGCTCCCTCGCGCCCTTGTCCAACGGGAAGTAAGTGTTCTGAGG
AGGAAACAGGGGGGCGCTTGAGATGTGGATCTCGGGGGGGGGGGGGGGGG
GGGTTTTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11989:982..4690+

>mRNA_L-elsbetiae_contig11989.1693.1 ID=mRNA_L-elsbetiae_contig11989.1693.1|Name=mRNA_L-elsbetiae_contig11989.1693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2034bp|location=Sequence derived from alignment at L-elsbetiae_contig11989:982..4690+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGCCTTAGGGTTAGGGTTTGCTGCAGCCTTGCTGGTCGGTGGAAG
CGATGGCTTCGTGTCGTCGTCATCATTTTTGGGCGCCATGTCGCAGCAAG
CCGCTGCCGTGAAAGACCACCAGATGTACGCCTTAGGGTTAGGGTTTGCT
GCAGCCTTGCTGGTCGGTGGAAGCGATGGCTTCGTGTCGTCGTCATCATT
TTTGGGCGCCATGTCGCAGCAAGCCGCTGCCGTGAAAGACCACCAGGTCT
TGTCCATGGTGTCGACTCCCCCGAAACCTTCCGGCTCCACGGTGAGCATC
CCACTTTCGCAGGACCAGTTCAACGCCTACGTTCAGAGCACGTACGGGAG
GTATCCGCTCACGATCGTGGGCGGCGAGGGGTGCAAGCTCTTCGACTCCA
ATGGAAAGGTCTTGTCCATGGTGTCGACTCCCCCGAAACCTTCCGGCTCC
ACGGTGAGCATCCCACTTTCGCAGGACCAGTTCAACGCCTACGTTCAGAG
CACGTACGGGAGGTATCCGCTCACGATCGTGGGCGGCGAGGGGTGCAAGC
TCTTCGACTCCAATGGAAAGGAGTACCTCGATTTTGTTGCGGGGATCTCG
ACCTGCGCTCTCGGCCACGCAGACCCCGACCTCGCAGCGGCGGTAGGAGA
CCAGATGAAGAAGTTCCATCACGTCAGCAACCTCTACTACATCCCGGAGC
AGGAGTACCTCGATTTTGTTGCGGGGATCTCGACCTGCGCTCTCGGCCAC
GCAGACCCCGACCTCGCAGCGGCGGTAGGAGACCAGATGAAGAAGTTCCA
TCACGTCAGCAACCTCTACTACATCCCGGAGCAGGGGCAGCTGGCGAAGT
GGCTGGTGGACAATAGCTGCGCGGACCGCGTCTTCTTCTGCAACTCTGGA
GCTGAGGCCAACGAGGCGGCCATCAAGGGGCAGCTGGCGAAGTGGCTGGT
GGACAATAGCTGCGCGGACCGCGTCTTCTTCTGCAACTCTGGAGCTGAGG
CCAACGAGGCGGCCATCAAGCTGGCCCGGAAATACGCCCACACCAAGCTG
GGCATCGACGAGCCGGTCATCATTACCGCCAAGCAATCGTTCCACGGCCG
GACTATGGCCACGCTCACGGCCACGGGACAGCCCAAGTACCAGGAGAACT
TCGGGCCGCTTCTGCCAGCTGGCCCGGAAATACGCCCACACCAAGCTGGG
CATCGACGAGCCGGTCATCATTACCGCCAAGCAATCGTTCCACGGCCGGA
CTATGGCCACGCTCACGGCCACGGGACAGCCCAAGTACCAGGAGAACTTC
GGGCCGCTTCTGCCAGGGTTTGAGTACGCCACCTACAACGATGCGGAGGA
CCTGAAGCGGGTGGTGAAGCGCATCAACCGGCGGAGCAAGATCCGGTCCC
TCTTCGGCCGACCTCGTCGAGGGGTCGCCGCTATCATGATGGAGGCGTTG
CAGGTCAGTCCGTCCGGTCCGCCCAGCCCCCCGCAAGCTACACCGGGCGT
GAGTGCCCTGCTCGGTTTCCGACTGCTACATATGTATATCAGACCAGAGC
ATCACGCGGTATCACGCCCCGATGCTCCCTCGCGCCCTTGTCCAACGGGA
AGTAAGTGTTCTGAGGAGGAAACAGGGGGGCGCTTGAGATGTGGATCTCG
GGGGGGGGGGGGGGGGGGGTTTTTGGGTTTGAGTACGCCACCTACAACGA
TGCGGAGGACCTGAAGCGGGTGGTGAAGCGCATCAACCGGCGGAGCAAGA
TCCGGTCCCTCTTCGGCCGACCTCGTCGAGGGGTCGCCGCTATCATGATG
GAGGCGTTGCAGGTCAGTCCGTCCGGTCCGCCCAGCCCCCCGCAAGCTAC
ACCGGGCGTGAGTGCCCTGCTCGGTTTCCGACTGCTACATATGTATATCA
GACCAGAGCATCACGCGGTATCACGCCCCGATGCTCCCTCGCGCCCTTGT
CCAACGGGAAGTAAGTGTTCTGAGGAGGAAACAGGGGGGCGCTTGAGATG
TGGATCTCGGGGGGGGGGGGGGGGGGGGTTTTTG
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