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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1751 |
| Cds size | 1737 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815397.0958672-UTR-L-elsbetiae_contig11977:2269..2283 | 1622815397.0958672-UTR-L-elsbetiae_contig11977:2269..2283 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11977 2270..2283 + |
| 1691682878.245176-UTR-L-elsbetiae_contig11977:2269..2283 | 1691682878.245176-UTR-L-elsbetiae_contig11977:2269..2283 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11977 2270..2283 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815397.1056516-CDS-L-elsbetiae_contig11977:2283..4020 | 1622815397.1056516-CDS-L-elsbetiae_contig11977:2283..4020 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11977 2284..4020 + |
| 1691682878.2651272-CDS-L-elsbetiae_contig11977:2283..4020 | 1691682878.2651272-CDS-L-elsbetiae_contig11977:2283..4020 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11977 2284..4020 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11977.1682.1 >prot_L-elsbetiae_contig11977.1682.1 ID=prot_L-elsbetiae_contig11977.1682.1|Name=mRNA_L-elsbetiae_contig11977.1682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=579bp
MGASAKLAPKPSPRQVGRAAAATSTPELRQATGSNQPPGQVLPASPVIMS
SAPASSGRPALDMPSHFPYADAWHLLPYAQQLAICSPAAAAEAVLVTTRT
IDQDRQQQARRLREGEEQRLVARRAGTLAREARLRVLVQEQADIKAANGR
LAEQLRGLQDERCALDAKLGTTTSAQDIMLLREENLARDETAEGERWASQ
LASFAQPSSPRLDPVLATAPPASSTAATSSSAAATAASSPPVRAAPATSA
PPPASTTVPATVLAPVSVADFPALAPDPVSAPSWSTVAAASRSSATPAAG
SAAAHPRAAALFVHGDKRWADSSIARFAERHPNGLRHVDSLTITQLALRL
LLTIGQDNSGITLHQLANVSHRPLTPATESHLQDLLAALRAASANAPEAA
PWMRGRPGVWSGSWAESSSSSLPRGRSAAGVGGGRMDAPETNRSASRDKR
ERSQRTGAPGVIGSPSEPARAKKADGKATLKLTSRQVFSLLDTAPHSPLP
VLPHEYASWPLHPPPCPPVVARSDHTLPAPLSSSPALAATLAAAQSVSAS
CYADPEVFFTDPIPTPGNALVLPAPSTDA back to topmRNA from alignment at L-elsbetiae_contig11977:2270..4020+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig11977.1682.1 ID=mRNA_L-elsbetiae_contig11977.1682.1|Name=mRNA_L-elsbetiae_contig11977.1682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1751bp|location=Sequence derived from alignment at L-elsbetiae_contig11977:2270..4020+ (Laminarionema elsbetiae ELsaHSoW15)
CGCGAATTCTCGAAATGGGTGCCTCTGCCAAGCTCGCCCCTAAACCCTCG
CCTCGACAAGTTGGGCGTGCCGCAGCTGCCACGTCTACGCCGGAGCTTCG
CCAGGCGACCGGCAGCAACCAGCCTCCTGGACAAGTTTTGCCGGCTTCGC
CGGTCATCATGAGCTCCGCCCCGGCTTCTTCCGGGCGTCCTGCGTTGGAC
ATGCCCTCTCATTTCCCTTATGCGGACGCCTGGCACCTCCTACCGTACGC
CCAGCAGCTTGCCATCTGCTCGCCGGCCGCAGCGGCGGAGGCTGTGCTCG
TCACCACCCGCACCATCGATCAGGATCGACAGCAGCAGGCGCGCCGACTT
CGCGAGGGGGAGGAGCAACGGCTCGTCGCGCGCCGCGCCGGCACTCTGGC
TCGGGAGGCCCGTCTCCGCGTTCTTGTTCAGGAGCAAGCCGACATCAAAG
CGGCCAACGGCCGGCTTGCTGAGCAACTTCGGGGATTGCAAGACGAGAGG
TGCGCGCTGGACGCGAAGCTGGGAACGACGACTTCGGCGCAGGACATCAT
GCTTCTTAGAGAGGAGAATCTGGCCCGCGACGAGACTGCCGAGGGCGAGC
GCTGGGCCAGCCAGCTGGCTTCCTTTGCGCAACCTTCGTCTCCACGCCTA
GACCCGGTCTTGGCGACGGCGCCCCCGGCTTCTTCGACGGCCGCAACATC
TTCCTCGGCGGCAGCAACAGCGGCATCTTCCCCCCCTGTCCGAGCCGCCC
CTGCGACCTCAGCGCCGCCTCCTGCTTCGACCACGGTGCCCGCCACTGTT
TTGGCTCCTGTCTCGGTGGCCGACTTTCCTGCTCTGGCGCCGGACCCGGT
TTCGGCTCCTTCATGGTCTACCGTCGCCGCCGCCTCCCGCTCGTCGGCGA
CTCCGGCCGCCGGCTCAGCGGCGGCACACCCCCGGGCAGCGGCCCTGTTC
GTCCACGGTGATAAGCGTTGGGCAGACTCGAGCATCGCGCGGTTTGCCGA
ACGTCACCCCAACGGCCTTCGACACGTCGACAGCCTCACCATCACCCAGC
TCGCGCTGCGTCTGCTTCTCACCATTGGCCAGGATAACTCCGGCATCACG
TTGCACCAGCTCGCCAACGTCTCGCACCGCCCCCTGACGCCAGCGACAGA
GAGCCACCTCCAAGATCTTCTCGCCGCGCTCCGAGCGGCTTCAGCGAACG
CTCCTGAGGCGGCTCCGTGGATGCGGGGCAGGCCGGGCGTGTGGTCTGGG
TCTTGGGCGGAGTCTTCGTCTTCGTCGCTACCTCGTGGACGGAGTGCAGC
GGGTGTGGGTGGTGGCCGGATGGACGCTCCGGAAACTAACCGCTCGGCGT
CCCGTGACAAACGTGAGCGTTCACAGCGGACGGGCGCCCCAGGCGTTATT
GGCTCGCCCTCCGAACCGGCCCGTGCCAAAAAGGCCGATGGTAAGGCTAC
CCTTAAGCTTACGTCGAGGCAAGTTTTTTCTTTGCTCGATACTGCCCCGC
ATTCTCCGTTGCCCGTTTTGCCGCATGAATATGCCTCTTGGCCCTTGCAT
CCTCCTCCTTGCCCGCCTGTAGTTGCACGCTCCGACCACACTTTGCCCGC
TCCTTTGAGTTCATCGCCCGCGCTTGCTGCCACCTTAGCCGCGGCTCAAT
CTGTGTCTGCTAGTTGCTACGCTGATCCCGAAGTCTTTTTCACCGACCCC
ATACCAACGCCTGGAAATGCTCTGGTTCTCCCAGCGCCTTCCACCGATGC
C back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig11977:2270..4020+ >mRNA_L-elsbetiae_contig11977.1682.1 ID=mRNA_L-elsbetiae_contig11977.1682.1|Name=mRNA_L-elsbetiae_contig11977.1682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3474bp|location=Sequence derived from alignment at L-elsbetiae_contig11977:2270..4020+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTGCCTCTGCCAAGCTCGCCCCTAAACCCTCGCCTCGACAAGTTGG
GCGTGCCGCAGCTGCCACGTCTACGCCGGAGCTTCGCCAGGCGACCGGCA
GCAACCAGCCTCCTGGACAAGTTTTGCCGGCTTCGCCGGTCATCATGAGC
TCCGCCCCGGCTTCTTCCGGGCGTCCTGCGTTGGACATGCCCTCTCATTT
CCCTTATGCGGACGCCTGGCACCTCCTACCGTACGCCCAGCAGCTTGCCA
TCTGCTCGCCGGCCGCAGCGGCGGAGGCTGTGCTCGTCACCACCCGCACC
ATCGATCAGGATCGACAGCAGCAGGCGCGCCGACTTCGCGAGGGGGAGGA
GCAACGGCTCGTCGCGCGCCGCGCCGGCACTCTGGCTCGGGAGGCCCGTC
TCCGCGTTCTTGTTCAGGAGCAAGCCGACATCAAAGCGGCCAACGGCCGG
CTTGCTGAGCAACTTCGGGGATTGCAAGACGAGAGGTGCGCGCTGGACGC
GAAGCTGGGAACGACGACTTCGGCGCAGGACATCATGCTTCTTAGAGAGG
AGAATCTGGCCCGCGACGAGACTGCCGAGGGCGAGCGCTGGGCCAGCCAG
CTGGCTTCCTTTGCGCAACCTTCGTCTCCACGCCTAGACCCGGTCTTGGC
GACGGCGCCCCCGGCTTCTTCGACGGCCGCAACATCTTCCTCGGCGGCAG
CAACAGCGGCATCTTCCCCCCCTGTCCGAGCCGCCCCTGCGACCTCAGCG
CCGCCTCCTGCTTCGACCACGGTGCCCGCCACTGTTTTGGCTCCTGTCTC
GGTGGCCGACTTTCCTGCTCTGGCGCCGGACCCGGTTTCGGCTCCTTCAT
GGTCTACCGTCGCCGCCGCCTCCCGCTCGTCGGCGACTCCGGCCGCCGGC
TCAGCGGCGGCACACCCCCGGGCAGCGGCCCTGTTCGTCCACGGTGATAA
GCGTTGGGCAGACTCGAGCATCGCGCGGTTTGCCGAACGTCACCCCAACG
GCCTTCGACACGTCGACAGCCTCACCATCACCCAGCTCGCGCTGCGTCTG
CTTCTCACCATTGGCCAGGATAACTCCGGCATCACGTTGCACCAGCTCGC
CAACGTCTCGCACCGCCCCCTGACGCCAGCGACAGAGAGCCACCTCCAAG
ATCTTCTCGCCGCGCTCCGAGCGGCTTCAGCGAACGCTCCTGAGGCGGCT
CCGTGGATGCGGGGCAGGCCGGGCGTGTGGTCTGGGTCTTGGGCGGAGTC
TTCGTCTTCGTCGCTACCTCGTGGACGGAGTGCAGCGGGTGTGGGTGGTG
GCCGGATGGACGCTCCGGAAACTAACCGCTCGGCGTCCCGTGACAAACGT
GAGCGTTCACAGCGGACGGGCGCCCCAGGCGTTATTGGCTCGCCCTCCGA
ACCGGCCCGTGCCAAAAAGGCCGATGGTAAGGCTACCCTTAAGCTTACGT
CGAGGCAAGTTTTTTCTTTGCTCGATACTGCCCCGCATTCTCCGTTGCCC
GTTTTGCCGCATGAATATGCCTCTTGGCCCTTGCATCCTCCTCCTTGCCC
GCCTGTAGTTGCACGCTCCGACCACACTTTGCCCGCTCCTTTGAGTTCAT
CGCCCGCGCTTGCTGCCACCTTAGCCGCGGCTCAATCTGTGTCTGCTAGT
TGCTACGCTGATCCCGAAGTCTTTTTCACCGACCCCATACCAACGCCTGG
AAATGCTCTGGTTCTCCCAGCGCCTTCCACCGATGCCATGGGTGCCTCTG
CCAAGCTCGCCCCTAAACCCTCGCCTCGACAAGTTGGGCGTGCCGCAGCT
GCCACGTCTACGCCGGAGCTTCGCCAGGCGACCGGCAGCAACCAGCCTCC
TGGACAAGTTTTGCCGGCTTCGCCGGTCATCATGAGCTCCGCCCCGGCTT
CTTCCGGGCGTCCTGCGTTGGACATGCCCTCTCATTTCCCTTATGCGGAC
GCCTGGCACCTCCTACCGTACGCCCAGCAGCTTGCCATCTGCTCGCCGGC
CGCAGCGGCGGAGGCTGTGCTCGTCACCACCCGCACCATCGATCAGGATC
GACAGCAGCAGGCGCGCCGACTTCGCGAGGGGGAGGAGCAACGGCTCGTC
GCGCGCCGCGCCGGCACTCTGGCTCGGGAGGCCCGTCTCCGCGTTCTTGT
TCAGGAGCAAGCCGACATCAAAGCGGCCAACGGCCGGCTTGCTGAGCAAC
TTCGGGGATTGCAAGACGAGAGGTGCGCGCTGGACGCGAAGCTGGGAACG
ACGACTTCGGCGCAGGACATCATGCTTCTTAGAGAGGAGAATCTGGCCCG
CGACGAGACTGCCGAGGGCGAGCGCTGGGCCAGCCAGCTGGCTTCCTTTG
CGCAACCTTCGTCTCCACGCCTAGACCCGGTCTTGGCGACGGCGCCCCCG
GCTTCTTCGACGGCCGCAACATCTTCCTCGGCGGCAGCAACAGCGGCATC
TTCCCCCCCTGTCCGAGCCGCCCCTGCGACCTCAGCGCCGCCTCCTGCTT
CGACCACGGTGCCCGCCACTGTTTTGGCTCCTGTCTCGGTGGCCGACTTT
CCTGCTCTGGCGCCGGACCCGGTTTCGGCTCCTTCATGGTCTACCGTCGC
CGCCGCCTCCCGCTCGTCGGCGACTCCGGCCGCCGGCTCAGCGGCGGCAC
ACCCCCGGGCAGCGGCCCTGTTCGTCCACGGTGATAAGCGTTGGGCAGAC
TCGAGCATCGCGCGGTTTGCCGAACGTCACCCCAACGGCCTTCGACACGT
CGACAGCCTCACCATCACCCAGCTCGCGCTGCGTCTGCTTCTCACCATTG
GCCAGGATAACTCCGGCATCACGTTGCACCAGCTCGCCAACGTCTCGCAC
CGCCCCCTGACGCCAGCGACAGAGAGCCACCTCCAAGATCTTCTCGCCGC
GCTCCGAGCGGCTTCAGCGAACGCTCCTGAGGCGGCTCCGTGGATGCGGG
GCAGGCCGGGCGTGTGGTCTGGGTCTTGGGCGGAGTCTTCGTCTTCGTCG
CTACCTCGTGGACGGAGTGCAGCGGGTGTGGGTGGTGGCCGGATGGACGC
TCCGGAAACTAACCGCTCGGCGTCCCGTGACAAACGTGAGCGTTCACAGC
GGACGGGCGCCCCAGGCGTTATTGGCTCGCCCTCCGAACCGGCCCGTGCC
AAAAAGGCCGATGGTAAGGCTACCCTTAAGCTTACGTCGAGGCAAGTTTT
TTCTTTGCTCGATACTGCCCCGCATTCTCCGTTGCCCGTTTTGCCGCATG
AATATGCCTCTTGGCCCTTGCATCCTCCTCCTTGCCCGCCTGTAGTTGCA
CGCTCCGACCACACTTTGCCCGCTCCTTTGAGTTCATCGCCCGCGCTTGC
TGCCACCTTAGCCGCGGCTCAATCTGTGTCTGCTAGTTGCTACGCTGATC
CCGAAGTCTTTTTCACCGACCCCATACCAACGCCTGGAAATGCTCTGGTT
CTCCCAGCGCCTTCCACCGATGCC back to top
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