mRNA_L-elsbetiae_contig1196.1673.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1196.1673.1
Unique NamemRNA_L-elsbetiae_contig1196.1673.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: D8LPW9_ECTSI (Putative S-adenosylmethionine-dependent methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW9_ECTSI)

HSP 1 Score: 554 bits (1427), Expect = 2.350e-190
Identity = 293/366 (80.05%), Postives = 313/366 (85.52%), Query Frame = 1 
Query:  133 VVVVSQALLLLTPSYAFQLQPPISSSP--SAEVSHHGCGPARRAQALCRSSSACSTAAVAGTRRATTALGVA-------GADNDDESFAEDKRYRRKPKGANLKRDAAGLPSEKVYAPRQSAYGAPTVGGTGRAGKVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTIKKK 1203
            +++ +QALL LT S AF LQPPIS  P  S+  +H     ARRA      ++ C TA+ A T R       A       G   DDESFAED+RYRRK +GANL+RD  GLPSEK+YAPRQSAYG PTVGGTGR GKVRPQG+EREVSINNAARL+VAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFET D RFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNA LCGFSD+AKAVKGDVMDVLYNPR+YGLDAPFDVITVTPPYEEVVY ELVKALSVSDLV+QDT+VVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFV+IKKK
Sbjct:    1 MMIAAQALLALTESRAFLLQPPISPPPTHSSRFNHFSSNSARRAPVA---ATHCLTASSARTARTAIHAAAAKSRSSSGGRQGDDESFAEDQRYRRKARGANLRRDDTGLPSEKIYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK 363
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A835Z8R5_9STRA (Putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R5_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.850e-106
Identity = 179/305 (58.69%), Postives = 226/305 (74.10%), Query Frame = 1 
Query:  298 AVAGTRRATTALGVAGADNDDESFAEDKRYRRKPKGANLKRD-AAGLPSEKVYAPRQSAY--GAPTVGGTGRAGKVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTIKKK 1203
            AVA ++  +T  G   A +   +  + K+  R+P+GA+LKRD   GLP E VYAPR S Y       G +G + +VR QG ERE  +NNA RLRV GG+AKGRRLESP+V+LRPMM KVKEAL++TL+ FG+FE +  RFLDLF GSGSVG+EALSRGA H TFVD A +CC V  RNA  CGF  +  AV+GDV+ VL  P  +GLDAP+DV+T+TPPY EVVY +L+ A + S LV +DTIVVIEYPVELGC+PH IGDG +VGLRNRRYGRTV+GV++  P+G+   + DSRPEEF+++KK+
Sbjct:   48 AVAASQLLSTPSGGDAAADAASAEKDAKKRLRRPRGAHLKRDEVTGLPIEAVYAPRFSPYLTKKKLSGTSGGSKRVRAQGSEREEGLNNAQRLRVLGGVAKGRRLESPEVYLRPMMGKVKEALYNTLLSFGLFEGAGPRFLDLFCGSGSVGVEALSRGASHVTFVDLAAECCAVAERNAVACGFEGQGSAVRGDVLRVLSQPSAFGLDAPYDVVTITPPYAEVVYGDLIAAAASSPLVREDTIVVIEYPVELGCLPHVIGDGRLVGLRNRRYGRTVLGVYICRPTGRLY-LADSRPEEFISLKKQ 351
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A6V1VNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VNJ1_HETAK)

HSP 1 Score: 263 bits (672), Expect = 3.250e-78
Identity = 131/230 (56.96%), Postives = 174/230 (75.65%), Query Frame = 1 
Query:  511 KVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFS-DKAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTIK 1197
            ++R QG++RE   NN  +LRV GGIA+GR++ESPDVFLRPMM KVKEALFS+L   G+F++   + LDLFSGSGSVGIEALSRGA +A FVDFAK+CC+V ++N    GF   + +AV   V D L +P +YG D  FD++TVTPPYEEVVYA+LV+A++ S  V +D +VV+EYPVELG +PH +GDG ++GLRN+RYGRTV+  ++  PSG+     + +PEEF  +K
Sbjct:   86 RIRAQGKKREGGFNNPNKLRVMGGIARGRKIESPDVFLRPMMGKVKEALFSSLTNMGLFDSGSAKALDLFSGSGSVGIEALSRGASYACFVDFAKECCEVAMKNVVNVGFEPQQGQAVCASVYDFLADPARYGADHRFDLVTVTPPYEEVVYADLVQAVADSPAVGEDCVVVLEYPVELGSLPHLLGDGRLIGLRNKRYGRTVIATYIKNPSGKLE--YNPKPEEFERLK 313
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A7S2H4B1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H4B1_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.360e-72
Identity = 123/235 (52.34%), Postives = 172/235 (73.19%), Query Frame = 1 
Query:  511 KVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKAKAVK--GDVMDVLYNPRKYGLD--APFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTI 1194
            K+RPQG+ RE  +NN + LR+  G A+GRRL+SP+V+LRPMM KV+EA++ST   FG+++   TR LD+FSGSGSVG+E+LSRGA H +FVD ++DCCD   RN   C F ++ KA    GD +  L +P   G+    PF V+T+ PPYEE+VYA+L++A++ S LV+ DTI++IEYPVELGC PH I     G +VG+RNR+YGRTVV +++  P+G   ++ +SRPEEFV++
Sbjct:  149 KLRPQGKAREAGMNNPSNLRIMAGTARGRRLDSPEVYLRPMMGKVREAVYSTFTSFGLYDGDSTRHLDIFSGSGSVGLESLSRGASHCSFVDLSRDCCDAVERNLKWCNFEEEGKAAVYCGDAIRALSDPASMGIPDHLPFQVVTLCPPYEEIVYADLLEAVANSSLVTDDTIILIEYPVELGCFPHVIQRKDGGALVGVRNRKYGRTVVAMYIVNPTGNM-EVAESRPEEFVSV 382
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A7S1Z804_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z804_TRICV)

HSP 1 Score: 246 bits (628), Expect = 3.460e-71
Identity = 130/285 (45.61%), Postives = 189/285 (66.32%), Query Frame = 1 
Query:  409 NLKRDA-AGLPSEKVYAPRQSAYGAPTVGGTGRAGKVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFET-SDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGF---------------SDKAKAVKGDVMDVLYNPRKYGLD--APFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTIK 1197
            NL+R   A  PS     P  ++       G      +RPQG+ER+V +NN + LR+ GG A+GR+L+SP+V+LRPMM KV+EA+FST   FG+++  S+ R LD+F+GSGSVG+E+LSRGAGH TFVDFA DCCD   RN   CGF               +++ + V+ D +  L +P   G+     + ++T+ PPYEEVVYA+L++A+  S LV+ DT+++IEYPVELGC+PH I     G ++G+RNR+YGRTV+ ++V  P+G+  ++  SRPEEFV+++
Sbjct:   77 NLRRKVRASRPSLGHVVPSSASSSRTKKRGGSAGSALRPQGRERDVGLNNPSNLRILGGTARGRKLDSPEVYLRPMMGKVREAVFSTFTSFGLYDRGSNVRHLDIFAGSGSVGLESLSRGAGHVTFVDFADDCCDAVERNVKRCGFDVDEDDDDGTGRRAGTERTRVVRADYLRALRDPESVGIPPLTTYGIVTLCPPYEEVVYADLIEAVCNSRLVTDDTVIMIEYPVELGCLPHVITREDGGKVIGVRNRKYGRTVIAMYVVNPTGRM-EVASSRPEEFVSLR 360
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: B8BT17_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT17_THAPS)

HSP 1 Score: 236 bits (602), Expect = 4.880e-69
Identity = 122/241 (50.62%), Postives = 165/241 (68.46%), Query Frame = 1 
Query:  523 QGQEREVS-INNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFE-----------TSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKAKAVKGDVMDVLYNPRKYGLD--APFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIG---DGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTI 1194
            QG  R+    NN + LR+ GG  +GR+LESP V+LRPMM KVKEA++ST   FG++E           T  TR LD+FSGSGSVG+E+LSRGA H TFVD + DCC  C RN   CG    AK V  D    L  P   G+D    +D++T+ PPYEE+VYA+L+ A++ S+LV++DT+++IEYPVELGC+PHAIG    G ++G+RNR+YGRTV+ +++  P+G   +  +SRPEEF+TI
Sbjct:    1 QGVNRDTERYNNPSNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGEPIAKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGA-RETAESRPEEFITI 240
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A7S3VWL2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWL2_EMIHU)

HSP 1 Score: 233 bits (595), Expect = 9.890e-68
Identity = 134/258 (51.94%), Postives = 174/258 (67.44%), Query Frame = 1 
Query:  424 AAGLPSEKVYAPRQSAYGAPTVGGTGRAGKVRPQGQE-REVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRP--EEFV 1188
            A  LP+ +V APR+    AP      R G++R QG++ +E S+    RL+V+GG  +GRRL +P V++RPMM++V+EALFS L   GV   S  R LDLFSGSG VGIEALSRG GHATFVDF+ +C      N    G  ++   V+ DVM VL +P ++GL  P+D++TVTPPYEEVVYAEL+ A+  S L+ +D +V +EYPVELG  P  +G G +VGLRNRRYGRTVV ++V  PSG+    LD  P  EEFV
Sbjct:    3 ADALPTARVRAPRRLRNSAPGGQVASRPGRLRRQGKDGQERSLQ---RLQVSGGAHRGRRLVTPSVYMRPMMSRVREALFSMLYPTGVLRES-ARALDLFSGSGVVGIEALSRGVGHATFVDFSAECAGTIRSNCEALGEGERIDVVEADVMSVLADPSRHGLQGPYDLVTVTPPYEEVVYAELMGAICASPLLGEDCLVAVEYPVELGLFPPTLGGGRLVGLRNRRYGRTVVAIYVNRPSGK----LDLAPFSEEFV 252
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: I2CS21_NANGC (N6-adenine-specific methylase (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS21_NANGC)

HSP 1 Score: 236 bits (602), Expect = 2.160e-67
Identity = 134/289 (46.37%), Postives = 188/289 (65.05%), Query Frame = 1 
Query:  349 DNDDESFAEDKRYRRKPKGANLKRDAAGLPSEKVYAPRQ-----SAYGAPTVGGTGRAGKVRPQGQEREVSINNAA----RLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSD-KAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEF 1185
            +N   S   DKR+++K +   L  D  GLP + ++APRQ      A     +GG+  +   + QG+  ++     A    RLR+ GG A+G+RL+SP+V LRPMM+KV+EALFSTL  F +F +   R +DLF G+GSVG+EALSRGAG A FVD A +CC+   RN  LC F   K K V+    +VL  P++ G+   FD+I++TPPYEEVVYA+L++ +  S  V++D+++VIEYPVELG +P  IG G ++GLRNRRYGRTV+ ++   P+G+     D RPEEF
Sbjct:   55 ENGHNSRKVDKRWQKKRRRVELGPD--GLPVQPIHAPRQIRGAGDARKIHELGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSG--DLRPEEF 339
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: A0A7S3PYP8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.500e-66
Identity = 112/242 (46.28%), Postives = 174/242 (71.90%), Query Frame = 1 
Query:  490 GGTGRAGKVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSDKA--KAVKGDVMDVLYNPRKYGLDAPF--DVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTI 1194
            GG+G   K+R QG+ R   +NN + L++ GG A+GR+++SP+V+LRPMM KVKEA++ST   FG+++   TR LD+FSGSGSVG+E+LSRGA H TFVD A+DCC+   RN  + GF +    + +  D +  L +P   G+   F  +++T+ PPYEE+VYA+L++A++ S +V+ DT++++EYP+ELGC+PH I     G ++G+RNR+YGRT++ ++V  P+G+     +SRPE+FV++
Sbjct:  116 GGSG-GPKLRAQGKSRADGMNNPSNLKILGGTARGRKIQSPEVYLRPMMGKVKEAVYSTFTSFGLYDGVATRHLDIFSGSGSVGLESLSRGAAHCTFVDLARDCCETSQRNIDIIGFDEPGMTRVICTDAITALRDPYSVGIPEGFTYNLVTLCPPYEEIVYADLLEAVANSPVVTDDTVILVEYPIELGCLPHVITRDDGGALIGVRNRKYGRTIIAMYVVNPTGRLDSSAESRPEDFVSL 356
[Close]
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Match: K0SD16_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD16_THAOC)

HSP 1 Score: 231 bits (590), Expect = 2.970e-66
Identity = 137/294 (46.60%), Postives = 182/294 (61.90%), Query Frame = 1 
Query:  406 ANLKRDA-AGLPSEKVYAP---RQSAYGAPTVGGTGRAGKVRPQGQEREVS-INNAARLRVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFE-----TSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNAYLCGFSD----------------KAKAVKGDVMDVLYNPRKYGLD--APFDVITVTPPYEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIG---DGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTI 1194
            ANLKR   A  P+     P   R   YG    GGT ++ ++RPQG  R+    NN + LRV GG  +GR+LESP V+LRPMM KVKEA++ST   FG ++        TR LD+FSGSGSVG+E+LSRGA H TFVD + DCC  C RN   CGF                   A  V  D    L  P   G+D  A +D++T+ PPYEE+VYAEL+ A++ S LV +DT++++EYPVELGC+PH IG    G ++G+RNR+YGRTV+ +++  P+G   +  +SRPEEF+TI
Sbjct:   27 ANLKRKIKASRPTLGHVVPKNARSRQYGNDQ-GGT-KSAQLRPQGLSRDTQRYNNPSNLRVLGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGFYDGVGGQPCTTRHLDIFSGSGSVGLESLSRGAKHCTFVDMSSDCCGACERNIERCGFDGWNEGGIGTEVGDSGEPVANVVCTDAYRALREPETVGIDPEAKYDLVTLCPPYEEIVYAELLDAVANSKLVKEDTVILVEYPVELGCLPHVIGREDGGVLIGVRNRKYGRTVIAMYIVNPTGD-RESAESRPEEFITI 317
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1196.1673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW9_ECTSI2.350e-19080.05Putative S-adenosylmethionine-dependent methyltran... [more]
A0A835Z8R5_9STRA2.850e-10658.69Putative S-adenosylmethionine-dependent methyltran... [more]
A0A6V1VNJ1_HETAK3.250e-7856.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H4B1_9STRA2.360e-7252.34Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1Z804_TRICV3.460e-7145.61Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
B8BT17_THAPS4.880e-6950.62Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S3VWL2_EMIHU9.890e-6851.94Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
I2CS21_NANGC2.160e-6746.37N6-adenine-specific methylase (Fragment) n=2 Tax=N... [more]
A0A7S3PYP8_9STRA2.500e-6646.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K0SD16_THAOC2.970e-6646.60Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1196contigL-elsbetiae_contig1196:16267..26493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score560.5
Seed ortholog evalue6.3e-157
Seed eggNOG ortholog2880.D8LPW9
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Conserved hypothetical protein 95
EggNOG OGs2QSWU@2759,COG0742@1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionputative S-adenosylmethionine-dependent methyltransferase
Ec32 orthologEc-15_001850.1
Exons7
Model size2269
Cds size1161
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815396.31245-UTR-L-elsbetiae_contig1196:16266..163111622815396.31245-UTR-L-elsbetiae_contig1196:16266..16311Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1196 16267..16311 +
1691682877.8574739-UTR-L-elsbetiae_contig1196:16266..163111691682877.8574739-UTR-L-elsbetiae_contig1196:16266..16311Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1196 16267..16311 +
1622815396.4020698-UTR-L-elsbetiae_contig1196:25430..264931622815396.4020698-UTR-L-elsbetiae_contig1196:25430..26493Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1196 25431..26493 +
1691682877.939966-UTR-L-elsbetiae_contig1196:25430..264931691682877.939966-UTR-L-elsbetiae_contig1196:25430..26493Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1196 25431..26493 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815396.3252363-CDS-L-elsbetiae_contig1196:16311..167391622815396.3252363-CDS-L-elsbetiae_contig1196:16311..16739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 16312..16739 +
1691682877.8760152-CDS-L-elsbetiae_contig1196:16311..167391691682877.8760152-CDS-L-elsbetiae_contig1196:16311..16739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 16312..16739 +
1622815396.337349-CDS-L-elsbetiae_contig1196:18938..191071622815396.337349-CDS-L-elsbetiae_contig1196:18938..19107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 18939..19107 +
1691682877.8854334-CDS-L-elsbetiae_contig1196:18938..191071691682877.8854334-CDS-L-elsbetiae_contig1196:18938..19107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 18939..19107 +
1622815396.3486454-CDS-L-elsbetiae_contig1196:20220..202831622815396.3486454-CDS-L-elsbetiae_contig1196:20220..20283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 20221..20283 +
1691682877.8950903-CDS-L-elsbetiae_contig1196:20220..202831691682877.8950903-CDS-L-elsbetiae_contig1196:20220..20283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 20221..20283 +
1622815396.3585343-CDS-L-elsbetiae_contig1196:21303..214051622815396.3585343-CDS-L-elsbetiae_contig1196:21303..21405Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 21304..21405 +
1691682877.9030228-CDS-L-elsbetiae_contig1196:21303..214051691682877.9030228-CDS-L-elsbetiae_contig1196:21303..21405Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 21304..21405 +
1622815396.3686285-CDS-L-elsbetiae_contig1196:23509..235811622815396.3686285-CDS-L-elsbetiae_contig1196:23509..23581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 23510..23581 +
1691682877.9133658-CDS-L-elsbetiae_contig1196:23509..235811691682877.9133658-CDS-L-elsbetiae_contig1196:23509..23581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 23510..23581 +
1622815396.3802297-CDS-L-elsbetiae_contig1196:23915..240321622815396.3802297-CDS-L-elsbetiae_contig1196:23915..24032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 23916..24032 +
1691682877.9234095-CDS-L-elsbetiae_contig1196:23915..240321691682877.9234095-CDS-L-elsbetiae_contig1196:23915..24032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 23916..24032 +
1622815396.3920557-CDS-L-elsbetiae_contig1196:25220..254301622815396.3920557-CDS-L-elsbetiae_contig1196:25220..25430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 25221..25430 +
1691682877.9316545-CDS-L-elsbetiae_contig1196:25220..254301691682877.9316545-CDS-L-elsbetiae_contig1196:25220..25430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1196 25221..25430 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1196.1673.1prot_L-elsbetiae_contig1196.1673.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1196 16312..25430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1196.1673.1

>prot_L-elsbetiae_contig1196.1673.1 ID=prot_L-elsbetiae_contig1196.1673.1|Name=mRNA_L-elsbetiae_contig1196.1673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
MPIVQQQPRGGMRRKRATLTGSKSCGAGWVVVVSQALLLLTPSYAFQLQP
PISSSPSAEVSHHGCGPARRAQALCRSSSACSTAAVAGTRRATTALGVAG
ADNDDESFAEDKRYRRKPKGANLKRDAAGLPSEKVYAPRQSAYGAPTVGG
TGRAGKVRPQGQEREVSINNAARLRVAGGIAKGRRLESPDVFLRPMMAKV
KEALFSTLMGFGVFETSDTRFLDLFSGSGSVGIEALSRGAGHATFVDFAK
DCCDVCLRNAYLCGFSDKAKAVKGDVMDVLYNPRKYGLDAPFDVITVTPP
YEEVVYAELVKALSVSDLVSQDTIVVIEYPVELGCMPHAIGDGTMVGLRN
RRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVTIKKK*
back to top

mRNA from alignment at L-elsbetiae_contig1196:16267..26493+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1196.1673.1 ID=mRNA_L-elsbetiae_contig1196.1673.1|Name=mRNA_L-elsbetiae_contig1196.1673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10227bp|location=Sequence derived from alignment at L-elsbetiae_contig1196:16267..26493+ (Laminarionema elsbetiae ELsaHSoW15)
GTTCAGTTCAGTTGGCCTGTGTGTCTATCTCACGACCCGCCAGCCATGCC
GATCGTCCAGCAGCAGCCCCGCGGAGGAATGAGACGAAAGCGCGCTACTT
TGACCGGAAGCAAAAGCTGCGGTGCCGGCTGGGTGGTCGTTGTCTCCCAA
GCACTCCTGCTGCTGACTCCAAGTTACGCCTTTCAACTACAACCCCCCAT
TTCCTCCTCACCCTCTGCCGAGGTCAGCCATCACGGCTGTGGCCCAGCTC
GGAGAGCTCAGGCCCTCTGTAGAAGCAGCAGCGCATGCTCTACTGCGGCT
GTTGCTGGAACTCGAAGAGCAACGACTGCACTCGGTGTAGCAGGCGCGGA
CAACGACGACGAGAGTTTTGCTGAAGACAAGAGGTACCGGAGGAAGCCTA
AGGGGGCCAACCTCAAGAGGGATGCCGCTGGTCTACCCTCGGAGAAGGTG
TACGCGCCCCGGCAGAGCGCCTAGTGAGTCAAACTGTTATATCGCCAAGC
TTGCTCGGGAGGTGTGTTTAGAGAGCCATGTCTTTCTCTCAAGATGTTGC
ACGAATAGCGGCGGGACCGGGCTGTGCATGTACCGTACATAGGTGACACA
AGATAACCCACCCCCTGGATAGATTTTGAAAGCTCGATTCCTCCCCAGCA
AGAAGAGTGCCAGTGCCGAAAGGGGTAGTGTTGGGAAGACCGAGTGGAGG
GGTATCCGAAAATGTGTCGTTTGGTGCTGGCGCCCTCTTCGCTACGGAGG
AATCGAGCTCTGAAAATTTGTCCAGGGGGGGGGCGGTATCTTGTGTCAAA
TACGGCAGTCTTCATGTACATATGTACAGGCAAAGTTGCATGGGCACGTA
AATCGGTTTATCCCAGTTTCGATGGTACGTGTTTCACTATGTTTGCCGCA
GTTTTTCAATCCAAAGGTGTGGTGCTGGGGCGTGCCCTCAACCCAAGACC
TGTAGTAGGCGAGGGCAATGGGTACCTTGTGTGTCGGGTTGTGTCTATGT
ATGGTCATGTACACACTCCCCTGTCTCGCGTGCCGCGGTGGTCGTTGCCC
ATATTTTTTTCTGAGAGGGGCCCCGCACATAAATGCGGTAGGGGCTACGT
ACCTAGACTTCTGCACCCGCCAAACCCTTGTTTCACCAATCAATAGGCTT
GTTGCAACACCCGCGCACCCGCGTTTCAGGGGGCTCCGTGTCGCGCTTTT
TGGAAAGAAATGTTCACGAGCGCCGGAATTTTGGAGCCCCCGCTGGCCCG
CTTTCGCCATAAGGGCTGGGCAGTCACTTCGTAATGGCTCCGGCTGTATT
TGGGATCCAAAATCCCCCCATCCTTCTATGGAATCTGTGTGGATTCCCGT
ACAGCCTGGTCCCACCGTGAAGCTTTTCGGGCAATGTTTTCGGCCGCCGA
CACAGCGATGAAGGTTCAAATCGGGAAACTTTTGGGGAAAAAATAAACAT
CGTTGGAGGTAGATTCATGGTGCGTGATTTTGTTCCCTTCTGTGAAGAGA
GGTGACTTTGGATGTTCGCTGATGTGGCTGTCATCCCTTGATCCAAAAAT
GCTCCACCCTTGAAATGACTCTGCACTCTGCACCCATGTGCCGAAACACG
GAGCCGAAACACGGAGCGCTTTCGTGAACTCCTTTGACGGCCGACAGCCG
CGTGAAGTTTGCTGCTGAGGGGCAAAAAAATCAGCAGCAAACTGGCTTCT
TACAGTCGCGACGACGCAGCATCCCTCGAGCTCAGGACGAAACAAAGGCT
TGCAAACTACTTGCGGACGTCGAAATTGATATATACCAGACCACCTGAAA
ATTTAAGAGCAAGCTGCGACCTGTGTATTGTAAGGAGCAGAATGGTTGTT
CTGAAAGGTTGTGACTCGGTCGAGCTCAGCGAAAAAGAAGGGCTGGGGGC
TGAAAGGGAAATTTTCCCGCCTGCGTGGACTCCGGTGACAATTTTTTATT
GCGCGGAGCCCCCTGCAACGCGGGTCAAGGGGTCACCCAGGTGACAATCC
TGGAAGCATATCCCCCCCTCCTTCTTTTTTGGCCCTACCGAGGTTAAGGA
AACATATAAGATTTAAGTATAGGGGGACCGTTCGGGGGCATATACCCCCG
GCTAAAAGCGCCCCCTTAATAATACCAGCTGAGGGCCCCCTTTCTTTTAT
GCTTCTATAGGTTTTAGTATACCCCCCCCCCCCCCCCCCCCCCCCACTCT
GGCCATATGGAAGGTTGGGNNNNNNNNNNCCCCGCAATCCTGGTGGGGAC
CCCTTGCGGGGGTGGCAAAAGAGCCTCTAATTCTCAAAAATAGTTTTGGG
GGCAGGCGGGGGGGGGGGGGTACTAATCTAGGAAATATATAGACTTAAAG
ATCCCCGACAGTGCCACTTCTTCAGAATTGGAGGGCCCTGCTGCATACAT
ACATACCGTAGGTGACATAAGATAAGACACACCCCCTGGACCGATATTGA
AAGCTTGGTTACTCCGCAACGGTTACGATTCTAACCACAAACGCCACACT
GTCGGAGAGCTCTCGACGAGATCTTTCCAACGCCGCCCTTTTCCGGACTG
ACTGACGCTCTGCTTGCTGTGGAGTACTTAAAGCTTTGAAAATCGGTCCA
GGGGGTGTCTTATCTTATGTCACCTACGGTAACCACCCCGGAACGCCTCC
CGCGCCTTCACGCGCCTCACAGCGGCGCCCCGACGGTGGGAGGGACCGGC
CGCGCTGGGAAAGTTCGGCCGCAGGGGCAGGAGAGGGAGGTTTCGATCAA
CAACGCGGCGCGATTGAGGGTGGCGGGGGGTATCGCCAAGGGGAGGCGGC
TTGAGTCCCCCGACGTGTTTTTGCGTCCCATGATGGCCAAGGTGCGTGTA
CGGCAAGGGGCCTCTCCCGGATTGCAGGGCTGGCGCACCACAGGTGCAAA
ACACCGATAAGCCCCAGAATCAAGGGAGGGGGGGGTCTCACTATCTACAT
GGTAGGATTTAGTATGGTCGTACTTGTGACGCTCGTTACCACCCCCCCCC
CCCTCCTCCTCCAATAAATCCGAGTGTTGGTGGGTCCTGACGACGCCATA
TAGGGTCCTGACGACTCTATCCACAGTAATTCCTATACAAAACAAAATAT
CGATAAACCCAGCATTAGGGGGGGGGGGGGGGCTGTGGTGCCTACCCTGC
ATTCCGGGAGGCCCCTATGTTCGAGGACGCGGGGGCTGCGGGAAAGGAAA
TCATGTGTGTGGGTGTCGTAGTTTCTGCGGGGAGGGACGGGCAGGGAGAT
GGTATTTTATGTATTGTCAGGTTCGAAGAACAAAACGTGAGCTGGTGGAA
CCTTTAAGTTGGGTTCCCGTTTGGTTTTGATCTGCGGTCCAAACGGCGGG
ACTGTTTGGTGGATGCGTGTTTGCGTGTCGGCAGGGAAAGGGGGGTAGGG
CAAGGCATGTATGTACCCTAGGTGACACAAGATACCACACCCTCTGGATC
GAACTTTAGAGCTCCATTACTCCGTAACGAAGAAGGTGCCAGCACCAAAC
GACGCATTTTCGGACAGCCCTTGACTAGATCTTTCCAACGCCGCCCTTTT
TGGCATTGGCACTCTTCTGGCGGGGGAGGAGTCGAGCTTTGAAAATCTGT
CCAGGAGTGTGGTATCTTGTGTCACCTACGGTATGTACTCGAGTACATAA
CCGTGCATGTTTTTCGAAAGGAATAGTGTCGAAAGTTTTCGACATGGAGG
TGGAACGAAGAGGAAACCGTCGATTTCTGGCTCTGTTTCCCTCTGTTGCT
CTTGCGTGGACAATGGCTTCGAGCCCCCTCGGCATTCTGCTCGATAGTGA
GAGCTGGAGTAGGAGGTATGGAATGTGTAAAAATATATCTCCGCGTTTGA
CGGGACAGACAGGACCCCGGCTAGATCATGAAACACCTTGATTATGCTCA
AAAACTGCACCATTGCCATTCGACTTACCGCGTTACGTGCGCCTGCGTCC
GCAGGTGAAGGAAGCGTTGTTCAGTACCCTCATGGGCTTCGGAGTCTTCG
AGACGAGCGATACAAGGGTAGGTGGTCACGATGAGACAGAACGTTGAGAG
GGGGTTGCCGTGAACCGAAAAAATAGCGCCCCAAGCCCCAAGCGAGAAGT
CACCGTTTTCTAGCGTACCGTATCTCATCCTAGGCTCGTACGCACGTGTT
GAAACGCCCGCGTTTGGGCGGAGGCGTGTCAGGACTCGCCGGGTCGCTGC
CGGGCGACAGAGGCGCCGGTACCGACCAATCCCAGGTGGTCGGAAAGCAC
TCGAACGACACAAAAATAGCCTCAGCCGCACCCGTTTCTGTTGCCAGGAA
CATTGTTTTTTTTGCTACGGTACACAAACTAACAAATATTTCAGTCCTTC
GCGCCGGTCTTCCTTTGTTACGTTGTCCCCCCGCATTGTTCCCCCGACAG
CAGTTCCTTGACCTCCTCTCTTTTTGAAAGATAAGCAGATAATCAAAAAT
GGAACCTAACCCACATTGGAGACGGGACTCCCGTGATAATTTTCGGCATA
CCATATAGTGACGTAATATTGGGCCGGCCGGGTAGAAAAACACCTAAAAT
ATTAGAAGATTCAACATCTCCCCTGCAGCTCTCTGATAGGTCAAACAACA
TGTATTCCGGGGAGAAACCCTCCGTGATGTCGTGATGTTGTCACCAACTT
CTATGATAGGAACACATCGCATGATTTGACTTTATTAAAAATAAACAAAG
AATCAAAGATGGAACCTAACCCACACTAGAGCAAAGACTCGATATGGGGT
TCAAACGGTATCCATACAGAGACGTAATATATAATATTTGGCGAAGCGAG
CAGAAAAACAACCTAAATATCAGAAGAGTTCAACATCTCCCCTGCAAAGA
TTTAAGGTTGGCTTTATTGTTAAAATATTCCGACGGCAGTTTCTTGCCTG
TTCTCCTTCATTTAAAATGTTTGTCCGACGGCAACTTCTTGCCATTTTTC
TTTTTCGTTTTAAATGTGTAAATTATCCGATGGCAGTTTTTTTTGTCCTC
TTTTCTCTTTTTCGTCGAAATTTTGTTCCGGCGGCAGTTTCTTGACCTCT
TTTCGGGCTCTGGTTCGGTGGGCATTGAGGCGCTGTCGAGAGGAGCGGGT
CACGCGACTTTTGTGGACTTCGCCAAGGACTGCTGCGATGTGAGGACGTG
TTTGCTGCCGCCAATAATGGCGTTCACATCAGGGGGGCGAAAGTGTTGCA
CAACTACTCAGCTTCGTTAACACTTGTTCGCGAGGGGAAGTTCCAGCGGG
TTTTCACCGGTGTAGGCTTTTGTGTTCTCATAGTCAGGCAGATGCCCCCC
TCCCCCCCCCCGTCCCAAAATGATTGCAGCTCCGGCGATGAGGAATATTT
ATCGGGGGAATTGTTTTATGGTCGTTTTTTTGTTTGACTCCTTTTGAGAT
GGTCAATTCTAGACCTGCCTGGTGTAGCTTGCATTCTAGGGTTATCACAA
GTGTATTGCCTAAAAGTCCTTTTCAAAAGTCTGGGAGGAAGTTCGGGACG
GTTGGGCCATTTAGTGTGCGGACCTCAGGAAAGTGCCGGTTCGCCCCCTA
GCCTAGACTGTACACTGTACACCCACTGGTATCTCACGAAGATTTTGTGT
ATACATAGACGTAAGATGGAAAAATGGACGAGTCAAAAAAATCTTCGGGT
GTGCTGCGCGTACGGCGCACACAGCACACAACCAGCACATAATCTGACAT
CTCATCGGGCATCACAAGCCGCATGTGTATTCAGGAATGCCTGCTGTGCA
GCGGCGCAGCAGAGTGACAGGCGAGACGGCGGTGTGTGGCGGGAAAAAAA
TAAGTGTCCGCACTCTCTCTCATGCAAAAAAAAAGGACCACATTTTAATT
TTTCCCGTTGTGGCCTCTCTCGCGACACTGCCGACAGTCGGCAACGAGCT
ATAACAAACGCACCAGGCGTCCTCTACAGGGTGTGTCTATAAGACCCGTT
GGTCTATAACAGCGGAAGTCTTTCCCTTGTCTCTGTTTGGGGGAGGTGAA
AAGCCGCACACTTTTGCTTGGGCACATCACCGTTGGTTTTTTTCCGTTGA
TCACCCCATTACCACAGATAGATCCACAAAGCAGCTCACCCCAGCACACC
TTAGCACCAGGGGGTGCTCTGAGGAGGGTTTATGGTGCTCTTTCGCGGGC
GTATGTCTCTGGGGTGGTGCGTTTTGCATCTCTGACGCGGTTGGTGTACG
CGCTGCAGGCTCGCAAGCTGTGTGCGTGGCAGGTGTCGGTTGGAAAAAGG
ACATATTTTTTGCCTGCGACGTGCATCGAATAATAGGAATAAATTCAAAA
TGTTGAGAAAAAGTCCCTGGGCAAAAACATGTTTCAGGCGCGGCCTAACC
TCCGAAACGTAGTTATATTATGAACCGGAACTACGAAAAGGACTTATTAT
TGGGAAAGGTAGTTACTATTTTTTGTGTGATGACCACCTGTTATGGGTTC
CAAGAAGCAGAAGGTACCGTAATCATGCGAAGGTTCGCACCCCCGTGTTA
AGCGTTTTTCTATAGCGTATTTCTCCACAACCAGGAGGGTACCACTGCCG
AAAAGGGTGGTTTTCGAAACGTCTCGTCGGGGGCTTTCCAGAGAGAGGTA
TCAGTTAGTGTTCGCGCCCTCCTGGTTGTGGAAAAACACGCTTTAGAAAA
ATGCTAACACGGGGGTGCGAACCTTCGCATGATTTACGGTAATTGTCTCT
GATGTTTGCTGCAAGTGGAGGGGCGTGATTTTGTGTTTCACCGGGCCGGT
TGACAGGAAATAACAGAAGGGCTGGTTCCTCGAACAGGGCCGACTTCAAA
GAGGGGACTACAATAATCGTTCTGCTGCAGAGAGGGGTCCTGAAATCGGT
TTTCGGGGGGGGGGGGGTACGGAGAGAAGAAGAGTTTCTCCAGCGGAGAT
GGACGGTAGGAAGGGACGGGGGTTGCTGATGACAGCCGTTTACACTTTTG
GCTGCGGCGGAACACGCTAAAACAATGTTTCTCCCCGAAGTACATGCTGT
TTGACCTGGCAAAGTTATGCAGGGGAGGTGGTGTACTTTTTCGTCATTTA
GACAGGTGTTTTTCTACTGGGCTGGACCAATATTACTACGTAACTATATA
TGGAATACCGTTAGAAGCTCATGGGAGTTCGGCTGTCTTTGTGGGTTAGG
TTCCATTTTTGATTAACTGTTTCATTTTCAAAATGTTTGTGTTTCAAGCG
CCGGCGCTCTCTCTGGCCTTGTCCTGTCTTTTGTCTCTCCAAGGTGTGTC
TCCGCAACGCCTATCTCTGCGGCTTCTCCGACAAGGCGAAAGCCGTGAAA
GGAGACGTCATGGACGTGAGTCTTCATCATCGAATTTCAACCTTGTTGTA
GGATAGAGAGGCAGAAGCTTTGCTCGCCGCCTCTCCCGGCCATGATATGA
ATATGTACCGTACACCGTATGCCTCAGGCTAACAAATGCTCTCCGCGTTC
GAACGCTCGTACACAGGTATTTTAATAAGGCCCTCCTCCTTGTCTTTATT
TGTCTGGTTTCCCGAAACCGCGGTGTGGTTGTCTAACCACCGTTTGGTCC
GTCGCAGCTAGATACGTCCTTTCTCTCGGCTGTCCACACTCCCCCCGCGG
TTCATTTTCTTGAGCCCCACGCCCTTGCTGCTCTGTTCCGAACAATCAGG
TGTTGTACAACCCCCGAAAATATGGGCTAGACGCCCCCTTCGATGTCATC
ACGGTCACGCCCCCGTACGAAGAAGTGGTGTACGCGGAACTCGTGAAGGC
CCTCTCCGTCAGCGATGTAAGCCGAAGACCCCAAACGCGGTGCTGTATCT
ATCGTACTGCCCGAGGACCAGATAGGGCACACGCGAGTGCCTTTGCTCTG
ATAACATGATGTTGGAAAATAGCAGGGAAGTAAGAAACCGCGCCTGAAGC
ATGCAACCGACCGGTTATAACCCTGCGCTGGCCGGGGACGAATACGTTCC
ATCCCCGGGGTGGTATACAGCGTACATACACTCTTGATATTTTTTTCGGT
CGGAAGCAGCTCTCGAGACATGCTGTGCTGGTTGTGTACTACTCCACTGC
TGCTGCCTTCCAATCGCTCTACTCTACCTTTGGGTTGTGTGGGCGGCGGT
CTACTTGAATGGGGGATGGGTTTTTAGGGGTTCCCGCACCATGTGAATAC
ACCCTCCCCGAATAAAGGGCCCCTGGAAGTAAAATGAATCTGGAACTTCT
ATGCAACCTACCTCGGAAACTGATAACCGGTTATAATCGGTTGCCAGTTT
CTTCCATCACTGGAAAATAGCACTCACGACGCCCCCAACCAAGAAGGCCA
AAGGCAGGCGAACAGCGGGTTATTAAGCCCAGGAAACTGTGCCAATGTTT
GCTCGTGGAATGTTGTCCGCGGTCGAGCTGTCGAATGTGCGTGTGTAAAA
GCTCGCGGTGTCGGGTGCGTGCCTCTACCTATGTAGGTAGCCGGGAAGAG
CGCGGAGGATTGCCGATAGTTTATAGTTGGCTACGTGGTCACGGCGGAGG
CGTCCCGAAATAAACCAACCACGCCACCCTCACGCACCCATCGCTCAAAA
CGGCCGGAAAGCACGCCCGAAATTGCGTTCACCAGCCCCGTGGACCTGAG
CATGCGTGGTTCAGTAGGATATATGTTTTTTACCGGCATATTCATAGGTG
TACCTCCTCGGCTTTGTGTACCCTTGCCCGGTGGATCTGCGTATGTTTTT
TTCAGATCTTCTGGTGGCTCTAGCACTTCTGTGACCACGGGCCGTGAGTT
GCTAGAATTTTGGAATTAGCAATCTCGATTATACGAGCTAAATTAATGTG
AAGAAACAACAACCTGAGCCTCAGTTTTCCCTCCCTCGCTCGCTGTCGCA
CTGCCTCCGGGTGCCTCGTCGTACCGGTCCTTCGGGCTCCGGGCGTTGTT
TCTTGGTAACCGTCGCTGTCAACGACATTGTCAACACCGATCGACAAAGC
GCAGCTCGTGTCTCAGGATACGATCGTCGTGATCGAGTACCCTGTGGAGC
TCGGCTGCATGCCGCACGCGATAGGGGACGGCACGATGGTGGGCCTCCGG
AATAGACGGTACGGCCGGACGGTGGTAGGGGTTTGGGTTTACCTGCCTTC
GGGGCAGTTCGGCGACATGCTCGACTCTCGCCCGGAGGAGTTTGTCACTA
TCAAGAAGAAGTAAAACAGGAATCTAGGTTGGACGTGCTGTATCTTCTGC
GAGCCGGACGTTGCGGTTGGTTTGGGGAGTGGTCTATGTAGGCGGGATTT
GACGGCACGGAGGTAAGGGAGGGAAACCACTCTCTGGAAACATATCGTGT
TCGGGTCTGTGCCCTGTGTTGGCTGAATCTAGTCGGTACATGTATACAAG
TAGTCTACATGCTTTCATGGGTTTTCAGAGCACCAGCGTCACAGCACGAA
ACATAAACTCGTTGTTTTTCAAGAACCCCAAGTGCCTAGTTTGTCACAGC
CGCAAGCAGGGACAAGTTTGACGCTCCCTCCGCACATTTCGTGGAGGCGG
CACACTCTCGCCATAGGGATCGTTCGTCTAAATCAGGTCACCCGCCCTTG
GGCCCAGAAGTTACCGTTAGTCACGGAGTTTTCGCCCCGGGGAGGGGATT
TCGGTTTTCATCAAACCAACACCCGCGGGGGGAAATTCACGTATTCATGG
GGGTAAGATTTGTTTCAACAATACCCCGGGGGAAGTCCCCCCCCAATGAG
ACGATTAAGGATGAGGCACGCAGCACAGCTTTGAAATCCTGGATAGGGAT
TCCAGGAGAGAGCCCGAAGCGACACTTGTTTTTTTTATAGCGGTTCTTTT
TTACCATCTTCCACAGAAACTGCCGTAATAGAACTCTCTCCAGCTGCCCT
CTTACCGCAAAATCGCTTTTTGCACTTCGAAACAGGAACCGATACCAAAA
GTCCTCAGTCAATCTTAGGAGTTGGCTATCTTGAGATAGCCCTTACTGTA
GGTATTAGAGCAGAGAGCAATATGTAACACGGTCGACCGTGTGAATACTA
GTTTTCACCGAGCAAACTAGATTTTTGTGTGTCCGCGAAACGAGGGCAGG
CACGCTTGGAGTAGACAGCAGTTAGGGTCAGCCATGGAGCGCTATAGGCC
TCTGGAGACATCGTCTTCGACTTAGCACCCCTTAAAAGAACCTTGGAGGA
ACATAGTCGGAGCACAGCAGGAGCGGTGCGCAACTTTCGATCTGGAGAAC
TTGTGTTTCAAACTTATCAAAATGTCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1196:16267..26493+

>mRNA_L-elsbetiae_contig1196.1673.1 ID=mRNA_L-elsbetiae_contig1196.1673.1|Name=mRNA_L-elsbetiae_contig1196.1673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig1196:16267..26493+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGATCGTCCAGCAGCAGCCCCGCGGAGGAATGAGACGAAAGCGCGC
TACTTTGACCGGAAGCAAAAGCTGCGGTGCCGGCTGGGTGGTCGTTGTCT
CCCAAGCACTCCTGCTGCTGACTCCAAGTTACGCCTTTCAACTACAACCC
CCCATTTCCTCCTCACCCTCTGCCGAGGTCAGCCATCACGGCTGTGGCCC
AGCTCGGAGAGCTCAGGCCCTCTGTAGAAGCAGCAGCGCATGCTCTACTG
CGGCTGTTGCTGGAACTCGAAGAGCAACGACTGCACTCGGTGTAGCAGGC
GCGGACAACGACGACGAGAGTTTTGCTGAAGACAAGAGGTACCGGAGGAA
GCCTAAGGGGGCCAACCTCAAGAGGGATGCCGCTGGTCTACCCTCGGAGA
AGGTGTACGCGCCCCGGCAGAGCGCCTAATGCCGATCGTCCAGCAGCAGC
CCCGCGGAGGAATGAGACGAAAGCGCGCTACTTTGACCGGAAGCAAAAGC
TGCGGTGCCGGCTGGGTGGTCGTTGTCTCCCAAGCACTCCTGCTGCTGAC
TCCAAGTTACGCCTTTCAACTACAACCCCCCATTTCCTCCTCACCCTCTG
CCGAGGTCAGCCATCACGGCTGTGGCCCAGCTCGGAGAGCTCAGGCCCTC
TGTAGAAGCAGCAGCGCATGCTCTACTGCGGCTGTTGCTGGAACTCGAAG
AGCAACGACTGCACTCGGTGTAGCAGGCGCGGACAACGACGACGAGAGTT
TTGCTGAAGACAAGAGGTACCGGAGGAAGCCTAAGGGGGCCAACCTCAAG
AGGGATGCCGCTGGTCTACCCTCGGAGAAGGTGTACGCGCCCCGGCAGAG
CGCCTACGGCGCCCCGACGGTGGGAGGGACCGGCCGCGCTGGGAAAGTTC
GGCCGCAGGGGCAGGAGAGGGAGGTTTCGATCAACAACGCGGCGCGATTG
AGGGTGGCGGGGGGTATCGCCAAGGGGAGGCGGCTTGAGTCCCCCGACGT
GTTTTTGCGTCCCATGATGGCCAAGCGGCGCCCCGACGGTGGGAGGGACC
GGCCGCGCTGGGAAAGTTCGGCCGCAGGGGCAGGAGAGGGAGGTTTCGAT
CAACAACGCGGCGCGATTGAGGGTGGCGGGGGGTATCGCCAAGGGGAGGC
GGCTTGAGTCCCCCGACGTGTTTTTGCGTCCCATGATGGCCAAGGTGAAG
GAAGCGTTGTTCAGTACCCTCATGGGCTTCGGAGTCTTCGAGACGAGCGA
TACAAGGGTGAAGGAAGCGTTGTTCAGTACCCTCATGGGCTTCGGAGTCT
TCGAGACGAGCGATACAAGGTTTCTTGACCTCTTTTCGGGCTCTGGTTCG
GTGGGCATTGAGGCGCTGTCGAGAGGAGCGGGTCACGCGACTTTTGTGGA
CTTCGCCAAGGACTGCTGCGATTTTCTTGACCTCTTTTCGGGCTCTGGTT
CGGTGGGCATTGAGGCGCTGTCGAGAGGAGCGGGTCACGCGACTTTTGTG
GACTTCGCCAAGGACTGCTGCGATGTGTGTCTCCGCAACGCCTATCTCTG
CGGCTTCTCCGACAAGGCGAAAGCCGTGAAAGGAGACGTCATGGACGTGT
GTCTCCGCAACGCCTATCTCTGCGGCTTCTCCGACAAGGCGAAAGCCGTG
AAAGGAGACGTCATGGACGTGTTGTACAACCCCCGAAAATATGGGCTAGA
CGCCCCCTTCGATGTCATCACGGTCACGCCCCCGTACGAAGAAGTGGTGT
ACGCGGAACTCGTGAAGGCCCTCTCCGTCAGCGATGTGTTGTACAACCCC
CGAAAATATGGGCTAGACGCCCCCTTCGATGTCATCACGGTCACGCCCCC
GTACGAAGAAGTGGTGTACGCGGAACTCGTGAAGGCCCTCTCCGTCAGCG
ATCTCGTGTCTCAGGATACGATCGTCGTGATCGAGTACCCTGTGGAGCTC
GGCTGCATGCCGCACGCGATAGGGGACGGCACGATGGTGGGCCTCCGGAA
TAGACGGTACGGCCGGACGGTGGTAGGGGTTTGGGTTTACCTGCCTTCGG
GGCAGTTCGGCGACATGCTCGACTCTCGCCCGGAGGAGTTTGTCACTATC
AAGAAGAAGTAACTCGTGTCTCAGGATACGATCGTCGTGATCGAGTACCC
TGTGGAGCTCGGCTGCATGCCGCACGCGATAGGGGACGGCACGATGGTGG
GCCTCCGGAATAGACGGTACGGCCGGACGGTGGTAGGGGTTTGGGTTTAC
CTGCCTTCGGGGCAGTTCGGCGACATGCTCGACTCTCGCCCGGAGGAGTT
TGTCACTATCAAGAAGAAGTAA
back to top