mRNA_L-elsbetiae_contig11950.1665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11950.1665.1
Unique NamemRNA_L-elsbetiae_contig11950.1665.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D8LTV8_ECTSI (PhoD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV8_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.590e-151
Identity = 209/238 (87.82%), Postives = 222/238 (93.28%), Query Frame = 1
Query:    1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714
            +SVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL+LE L R+DWDSKREDLLE YRKTYRTTWNMP VATVLASAANYMICDDHEFVDNL GDNPEHSD STVEFYVAK+GYQAYCEYQMQLL D+DV D  +KP+YAWKLSPKVGFFMTDNRI RTLHR +RPD EW DR+FMGP QW+R+ EAFS+DFAEC+TVFFGTPTPLVFISQS
Sbjct:  116 ASVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLILEPLARSDWDSKREDLLECYRKTYRTTWNMPAVATVLASAANYMICDDHEFVDNL-GDNPEHSDTSTVEFYVAKVGYQAYCEYQMQLLRDVDVQDTRVKPFYAWKLSPKVGFFMTDNRIERTLHRQDRPDAEWVDREFMGPDQWDRIKEAFSADFAECQTVFFGTPTPLVFISQS 352          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D8LTV9_ECTSI (PhoD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTV9_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 9.760e-106
Identity = 158/274 (57.66%), Postives = 197/274 (71.90%), Query Frame = 1
Query:    4 SVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRT--------TWNMPK---------------------------VATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHE--RPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714
            +VSCNC   +EK+ LWDRL+ V GD+DCVLHLGDQIYAD DFGAK  G V F+SAW++CL MLE +DR+ WD+ R  LLE YR+TYR         +WN P+                           VA VLAS ANYMICDDHEFVD+L GD PEHS+ +T +FYVA++GYQ YCEYQ QLL ++DVTD +L+P+YA++LSPK+GFFMTDNR+ R+LHR+E    + EWKDR+F+GP QW R+ +AF +DFA+CETV FG PTPLVFISQ+
Sbjct:  136 AVSCNCHTHIEKLGLWDRLSTVVGDVDCVLHLGDQIYADEDFGAKSGGSVRFDSAWQACLTMLEDVDRSGWDALRPQLLECYRRTYRKFVRGIEHGSWNGPRRPAQGMLLFSTMFWTRSIPLNMGTSPFVAKVLASTANYMICDDHEFVDDL-GDEPEHSNHTTPDFYVARVGYQVYCEYQKQLLNEIDVTDHTLRPFYAFRLSPKLGFFMTDNRVERSLHRYEDGTSEAEWKDREFLGPKQWTRLEQAFRTDFADCETVLFGAPTPLVFISQA 408          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5JSS6_9PHAE (PhoD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS6_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 1.020e-104
Identity = 148/238 (62.18%), Postives = 181/238 (76.05%), Query Frame = 1
Query:    1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714
            ++VSCN     EK+ LW RL RV GD+DC+LHLGDQ+Y D +FG K++G   FESAW + L +LE L R DWD+ +E++ E YR+ YRTTWNMP  A  LASAANYMICDDHEF D+L GD P+H + ST+ FYVA + YQ Y EYQ QLLED DVTD S+KPYYA KLSP+VG FMTDNR+ R+LHR +     W++R FMGPAQW+RVTEAF +DF  C+ V FGTPTPLVF+SQ+
Sbjct:   65 ATVSCNNHALTEKIKLWKRLTRVIGDVDCILHLGDQVYGDVEFGTKESG-EDFESAWHASLTLLEPLQREDWDNHQEEVREFYRECYRTTWNMPFTAICLASAANYMICDDHEFTDDL-GDEPDHHNPSTLAFYVATLAYQVYNEYQHQLLEDCDVTDLSIKPYYACKLSPRVGLFMTDNRVERSLHRAQGTKSSWENRTFMGPAQWDRVTEAFENDFDSCDVVLFGTPTPLVFLSQT 300          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D7FMC9_ECTSI (PhoD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC9_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 5.030e-103
Identity = 149/238 (62.61%), Postives = 182/238 (76.47%), Query Frame = 1
Query:    1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714
            ++VSCN     EK+ LW RL RV GD+DC+LHLGDQIY D DFG K++G   FESAW + L +LE ++R +WD+ +E++ E YR+ YRTTWNMP  A  LASAANYMICDDHEF D+L GD PEH + ST+ FYVA + YQ Y EYQ QL ED DVTD S+KPYYA KLSP+VGFFMTDNR+ R+LHR +     W++R FMGPAQW+RVTEAF +DF  C+ V FGTPTPLVF+SQ+
Sbjct:   65 ATVSCNNHALTEKIKLWKRLTRVIGDVDCILHLGDQIYGDVDFGTKESG-EDFESAWHASLTLLEPMERGEWDNHQEEVREFYRECYRTTWNMPFTAICLASAANYMICDDHEFTDDL-GDEPEHHNPSTLAFYVATLAYQVYNEYQHQLHEDCDVTDLSIKPYYACKLSPRVGFFMTDNRVERSLHRAQGTKSSWENRAFMGPAQWDRVTEAFENDFDSCDVVMFGTPTPLVFLSQT 300          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5KIJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ5_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.530e-65
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 1
Query:  346 DNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714
            D+LAGDNPEHSD STVEFYVAK+GYQAYCEYQMQLL D+DV D  +KP+YAWKLSPKVGFFMTDNRI RTL R +RPD EW DR+FMGP QW+R+  AFS+DFAEC+TVFFGTPTPLVFISQS
Sbjct:   14 DHLAGDNPEHSDTSTVEFYVAKVGYQAYCEYQMQLLRDVDVQDTRVKPFYAWKLSPKVGFFMTDNRIERTLDRQDRPDAEWVDREFMGPDQWDRLKAAFSADFAECQTVFFGTPTPLVFISQS 136          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5KX82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX82_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 6.440e-32
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = 1
Query:    1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE 174
            +SVSCNCFKFVEKVALW+RLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE
Sbjct:   64 ASVSCNCFKFVEKVALWNRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE 121          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A9T2H4_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T2H4_PHYPA)

HSP 1 Score: 120 bits (300), Expect = 1.790e-27
Identity = 85/247 (34.41%), Postives = 122/247 (49.39%), Query Frame = 1
Query:    7 VSCNCFKFVEKVA-----LWDRLARV--AGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWES----CLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTD-PSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFI 705
            +SCN     + +      LW  L++   AG +DC+LHLGDQIY D D       G+  + AW       +  L+ + R  W    + + E YR+ YR TW     A  LA+  N MI DDHE  DN  GD  E  D S+ +F+VA+  +    EYQ QL ED+D +   ++   Y + +   VG    D R SRT HR    D+  K   ++G  QW  +T++ S D  F +   +   +P PLVF+
Sbjct:  200 ISCNKIFITDMLIAPASDLWTHLSKSIEAGKVDCLLHLGDQIYGDGDKRQDAQAGMD-KDAWSDRFRKSMEKLKDVPREKWIDHGDVICEYYREVYRDTWRHAPTAKCLANCPNLMIYDDHEVRDNW-GDVEEDWDPSSADFFVARCAWIVSMEYQRQLYEDVDFSSLENIHEDYHFHVVGGVGLMFLDIRGSRTFHRV--IDDVNK---YLGSRQWNAITKSLSPDGEFGKARALLVCSPAPLVFL 439          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A0G4GS70_VITBC (PhoD domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GS70_VITBC)

HSP 1 Score: 119 bits (298), Expect = 2.420e-27
Identity = 88/263 (33.46%), Postives = 122/263 (46.39%), Query Frame = 1
Query:    7 VSCN----CFKFVEKVA-LWDRLARVAGD--LDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL-----MLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDL---DVTDPSLKPYYAWKLSP----------KVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFISQS 714
            VSCN      K VE    LW  L +   +  +D +LH+GD IYAD+D    +     F+   + C       ++E   R  W ++ E++ E +R  YR TW  P    VLA+  N MI DDHE  D+  GD  EH D    + YVA   YQ Y EYQ QL ED    +V  P+  P    + +P          +VGF   D R  +T H +++ D   KD   MG AQW+ + EA      F  C  V      P+ ++S +
Sbjct:  102 VSCNKIWTTHKDVEPSGDLWGDLEQRVKERSVDYLLHIGDNIYADSDLYLIEGHKRDFQGPDDECRFAVAKKLIEDKPRDQWVNEYENMCEIFRDVYRLTWGHPPTRRVLANIPNLMILDDHEIRDDW-GDTDEHRDPKNPDHYVAMAAYQCYNEYQRQLYEDFTLHEVPMPNYPPMLPPQPAPHCAYHFHSFGEVGFLFLDLRACKTFHWNDKTD---KDLPHMGAAQWDALREALGEGGTFDGCRFVLVLASVPVAYLSHT 360          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A7S0ZZ70_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZZ70_NOCSC)

HSP 1 Score: 109 bits (273), Expect = 3.360e-24
Identity = 80/251 (31.87%), Postives = 120/251 (47.81%), Query Frame = 1
Query:   10 SCNCF-----KFVEKVALWDRLA-RVAGD-LDCVLHLGDQIYADTDF-GAKKAGGVGFESAWESCLLMLE-----GLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVT---DPSLKPY--YAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVF 702
            SC+C+     K   +  LW  LA R+  D +DCV+H+GD +Y DTD+   +K   VG  +A E C   +       L    W +  E + E +R  YR TW  P  A   A+  N MI DDHE  D+  GD P   D+S++++++A   Y   CEYQ  L ED  +     P   P   + +++   VG +M D R  ++ H +E+ D ++     MG  QW     A S    F++C  +    P P  +
Sbjct:   16 SCDCYYNTRDKVEPESDLWRDLADRIERDEIDCVVHIGDNVYNDTDYCDIEKGKKVGQYTADEDCKWNIARKFVVNLPPQQWPTAIEQVREVFRAAYRETWAHPPAAFAFANCPNLMIFDDHEVRDDW-GDRPGDKDRSSLDWFLASQCYFVICEYQRVLFEDTALPVQWSPQTWPRQTFYFQVFGDVGVYMQDIRGCKSFHYNEQTDLQFP---MMGAHQWSEFERALSPGGVFSQCRILIVAGPEPFAY 262          
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A1Y1I3T4_KLENI (PhoD domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3T4_KLENI)

HSP 1 Score: 107 bits (268), Expect = 3.470e-23
Identity = 77/229 (33.62%), Postives = 112/229 (48.91%), Query Frame = 1
Query:   46 LWDRLA-RVA-GDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL---MLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTD-PSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFIS 708
            LW  L  R+A G +D +LHLGDQ+YAD D    KA      S      +   ML+G+    W    + +   YR+ YR TW  P  A  LA+  + MI DDHE  DN  GD P   D +++  +VA+  ++   EYQ QL ED+D      +   + + +   VG    D R SRT HR  RP++ +K   ++G  QW  +  A      F     +   +P P+VF++
Sbjct:  184 LWHHLEKRIAKGQVDMMLHLGDQVYADGDKAFDKAAAREHTSLSNKFAVAEDMLKGIPWEQWPQYYDRICAIYREIYRETWAHPPTARCLATCPSIMIYDDHEVRDNW-GDLPTDWDPASLHMFVARCAWRVQLEYQRQLHEDVDFAHLERITRDFHFHVVGGVGLMFLDIRGSRTFHR--RPNDPYK---YLGSDQWTEIKSALGRGGIFDGVRALLVCSPAPVVFLT 406          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTV8_ECTSI1.590e-15187.82PhoD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LTV9_ECTSI9.760e-10657.66PhoD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5JSS6_9PHAE1.020e-10462.18PhoD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FMC9_ECTSI5.030e-10362.61PhoD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KIJ5_9PHAE1.530e-6580.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX82_9PHAE6.440e-3296.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A9T2H4_PHYPA1.790e-2734.41Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A0G4GS70_VITBC2.420e-2733.46PhoD domain-containing protein n=2 Tax=Vitrella br... [more]
A0A7S0ZZ70_NOCSC3.360e-2431.87Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A1Y1I3T4_KLENI3.470e-2333.62PhoD domain-containing protein n=1 Tax=Klebsormidi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11950contigL-elsbetiae_contig11950:228..5877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score139.8
Seed ortholog evalue1.6e-30
Seed eggNOG ortholog88036.EFJ36647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PhoD-like phosphatase
EggNOG OGs28H57@1,2QPI0@2759,37XUB@33090,3GNK5@35493
Ec32 ortholog descriptionAlkaline phosphatase D-related
Ec32 orthologEc-28_002560.1
COG Functional cat.S
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons7
Model size717
Cds size717
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815395.6744103-CDS-L-elsbetiae_contig11950:227..3171622815395.6744103-CDS-L-elsbetiae_contig11950:227..317Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 228..317 -
1691682877.4202764-CDS-L-elsbetiae_contig11950:227..3171691682877.4202764-CDS-L-elsbetiae_contig11950:227..317Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 228..317 -
1622815395.6878965-CDS-L-elsbetiae_contig11950:676..7401622815395.6878965-CDS-L-elsbetiae_contig11950:676..740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 677..740 -
1691682877.4309745-CDS-L-elsbetiae_contig11950:676..7401691682877.4309745-CDS-L-elsbetiae_contig11950:676..740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 677..740 -
1622815395.6975756-CDS-L-elsbetiae_contig11950:1311..14081622815395.6975756-CDS-L-elsbetiae_contig11950:1311..1408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 1312..1408 -
1691682877.443683-CDS-L-elsbetiae_contig11950:1311..14081691682877.443683-CDS-L-elsbetiae_contig11950:1311..1408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 1312..1408 -
1622815395.7083666-CDS-L-elsbetiae_contig11950:2108..22191622815395.7083666-CDS-L-elsbetiae_contig11950:2108..2219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 2109..2219 -
1691682877.45515-CDS-L-elsbetiae_contig11950:2108..22191691682877.45515-CDS-L-elsbetiae_contig11950:2108..2219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 2109..2219 -
1622815395.717137-CDS-L-elsbetiae_contig11950:2897..29861622815395.717137-CDS-L-elsbetiae_contig11950:2897..2986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 2898..2986 -
1691682877.4653602-CDS-L-elsbetiae_contig11950:2897..29861691682877.4653602-CDS-L-elsbetiae_contig11950:2897..2986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 2898..2986 -
1622815395.726134-CDS-L-elsbetiae_contig11950:4360..44891622815395.726134-CDS-L-elsbetiae_contig11950:4360..4489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 4361..4489 -
1691682877.4745872-CDS-L-elsbetiae_contig11950:4360..44891691682877.4745872-CDS-L-elsbetiae_contig11950:4360..4489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 4361..4489 -
1622815395.7356503-CDS-L-elsbetiae_contig11950:5740..58771622815395.7356503-CDS-L-elsbetiae_contig11950:5740..5877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 5741..5877 -
1691682877.4855502-CDS-L-elsbetiae_contig11950:5740..58771691682877.4855502-CDS-L-elsbetiae_contig11950:5740..5877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11950 5741..5877 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11950.1665.1prot_L-elsbetiae_contig11950.1665.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11950 228..5877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11950.1665.1

>prot_L-elsbetiae_contig11950.1665.1 ID=prot_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGG
VGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVL
ASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQL
LEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRD
FMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS*
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mRNA from alignment at L-elsbetiae_contig11950:228..5877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11950.1665.1 ID=mRNA_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5650bp|location=Sequence derived from alignment at L-elsbetiae_contig11950:228..5877- (Laminarionema elsbetiae ELsaHSoW15)
TCCAGTGTGAGCTGCAACTGCTTCAAGTTCGTCGAAAAGGTGGCCCTGTG GGACCGACTCGCCCGGGTGGCGGGAGACCTGGACTGCGTGCTGCACCTCG GCGACCAGATCTACGCAGATACAGACTTTGGCGCCAAGTGAGTCGTCGGT CGAGCAGGTCGTCAGTGGGCTACTCGATGGAGAAGAAAGGGAGAACCTTT TCGGCCCCCTCCCGACTTCGGGGGATGGGGTGGGGTTTTTTAGCGTCGCC CCCCCCCCCCCCCCCCCCCCCCCCCCACCCGCCCCCGAACAGGCAGCCCC CGGGCACCAGAAAACGCCACCGGGGCCCGCGCCCCNNNNNNNNNNGGGGG CACCTCTCCCCCCCCCCCCCCCTCCTGGGGGGGGGGGGGGGGTTTTTGTT CCCCCCCCCCCCCCCCCCCCCCCCCGTTGATTCAAAGCGAGCTTGAAAAC GAGATCCGTGCGCCGAAATGAAAACGCCCGGAGATCTGATCCCGAGAGAA AGGGGCAGGAAATGGAACAACGGGGCGGCCTGAGGCGAATGGACTGATGA CGTGGAAGTGGATAGACCGAGCTCTCCCTTTGAGTTTAGCTGAGCCTTCC GTTGTTGTTTTTTTTTTACGGGGGGGGGGTTCGTAGAAACTGCACACAAG GCAGATAGATGGCTAGACACGCAGATATCTGCTTTTTCCCCCGGGGTGGT CGTTAAAGCTTGTTGCCAACAGCCCGCTGTAAATGTCGGGTTTATTTTCG CACAGGCCCCGAAAAAGCACAGTAGTAAAGTCGAAAAGCCCGACCATTGG GGGGGGCGGGCGGGCGGCTCTTCGTCGTTCCGGCGCTCAGAGCGAACACC GTGTGAAGTCTTCCCGCATAGGTACATCATATCCTCAACCTAATCCTGTA GATGGGGTCCTTTTCCGGAGAAAACAAGACTTGCCGTTGTGTGTCGCTCG AAGCCCTCGTCGCTAGCCATGGGCAACCAGCCCGGGGCTCCTCTTTTGGC AAGGGTTAACACCACGCCATTCATTCCCTGTGTCTTGTCGGTGTCCTCCT TGTTGTTGTTGTTGTTGCTGTTGCTGTCGTTGATTCTCAAATTAGCTCGT GGAATCGAAACGACTACTCGCCCAAAACCAAGCAAGTCCATTGACGGCCC CGTCGTGGTCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGTGCTGGAGCAATCAATCTCCCAAGGGCCGAGAAACGACAAACGTGAT GCAGTCGTGTTGGCGCGAAGCAAATATTTCTGAACGCGGCTGTTCTGGTG TGGTGTGGATTACGTGTCTGCACGTGTGTTTGTTTCATTTAACTTCGGTA TTCACGACGCGCCCTTTATTGATTGCCCTTGACGGCAGGAAAGCGGGGGG GGTGGGGTTCGAGTCCGCGTGGGAGTCGTGCCTGCTGATGCTGGAGGGGC TGGATAGGGCGGACTGGGACAGCAAGAGGGAGGACCTCCTCGAGTCCTAC CGAAAGACTTACCGAACGTGAGAGGGGAAGGCTATGTGGGGGGTAGGGCA GAGAGAGAGAGAGAGAGAGAGAGGGAGGGGAGAGACGAAGACAGAGAGGC GCTGTGGTGTTGGTAGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCGTTCTCTGCGCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAANN NNNNNNNNGGGGGGGGGGAGACGAAGACACAGGGGGGGGGGGGGGTTGGG AGCCCCCCCCCCCCCCCCCTCCCTCCCATTATTGGCCTATTCGACGTCTG CCCCACTGGCCTCCTTCCTAAAAATAAACAATGAATCAAAGATGGAGCCT ACCCCGCACTAGAGCAAGGACTCGATATGGGGTTCAAACGGTATTCCGTA CAGAGACGTAATATTTGGCGAAGCGAGCAGAAAAACAACCTAAAGTATCA GAAGAGTTCAACATCTCCCGTGCAAAGATTTAAGATATGCGAGGTCGGAC AACAATTATTCAGGCGGGTCTTTCTCCACTACGACTAGCTAGACGACCCA ACCGGGGTCACGCAGGAGGGGGGCTGGTAGTGTTCTCGTTTAACTCCGCT TACGTTTGTCTTTGCTGGTTATTTGCACGCTTATCGGTTCGTATCTCGCT TTGCGTGGGCGAGGGAGCAAAGCCAAGTGCATTGTCCGCTATTTTTCCCA CCAGAAACGGCAGAGAATGACGAGTGTTTCGACGGCGCGCACACGCGTGC AGTGAGGCGTGGGCGTTGGTGTTGAAAACCAGCAAACCACGAACAACAAC AACAAAAACAACAACACTTGAGTCGACTCTCCGAGCGTCGGGCCCTAAAT ACGCATGCGCAGCTTAGTTGTCGGGATGCTAGACTAACCGGCCGGCTTGC GGGATAACCGCATTGCGCCGCATTAGAACAGATGAATGCGGGCGAATAGG CCTTCGGGGTGTTTGTTCGCCCCTCAATTTTCTCCGGGCTCGCTAGGTGG ATACAGTCGACTGTACCCCGCTTTAGGGACGACTTTAACGACGCACGTTT TGAAGACGAGCCCCGCTTTCAGGACGATTTTTTCCACAGAAGCATGGCTC CCCGCATAAGTTAGAGCAAGCGGGGTATTTATCATATTTCAGTCTACGGA CCCCCCCCCCCGCCTCTTTTTCCCTTCCGCTGGCTAAAAAACAATCAGAA ATGCAGAATATGTTGCTCATAGGTATGTTAGTAGGTAAATACTACGTTTT TTTTAAACCTCGCTCGCGTGCAGGGTTAACTGAACCCAAAAACAGTTTAC AGGAGTGCTGTGTTTTTTTCTAACTGTTTCTGCCTGCTTTCATGCAATGT TTCTCTGCGCAAATTGATGCTTTCTTGTTTGTAAAACATAGCACCTGGAA CATGCCGAAAGTGGCCACGGTCCTCGCGAGTGCCGCCAACTACATGATCT GCGACGATCACGAGTTCGTCGACAACCTGGGTGAGCGTGCGTTTTCGTTT TCTCTTGTCCGTGCCTGCTGAGGCTCTCTCGTGTCATTTAGCGGCCTGAC GGTGTGTTTTGACCGTTCACCAATCACGCCATCTTGGTTAAAGTCTGTTG AGAGAGAGAGAGAGAGAGAGAGCAAGCAGCCCAGCTTGCAGCAGCGGCGG CAGCAGCAACACGGCTCCTTTTTGCGTGGGCTGGTGGGGGATACGTACAT ACAAAGGGGGCGCCGTGAGTACACTACCGCTATTTAGTGCATCCGCCTTA TCGGGTGTGCGCTCGCTCACTTCTTGAACCCCCCAGTCACTTTTCAGTCG CCAAGGCAACCAACCACCAGAGCCCCCCACCCCCTGACCAGGAAGAAAAG CTATTTTCTACGGGGTTATTGTACACGGAGCCCTTAAACAATGGTCAAGT TGGGGTCCATCCTGTGGATACACGTACATACATGCACCACCGAACTGTTC TCAACGGTGCTTGCTCCACTTGGTCCCTCTGCAAAACGTTGACGGCGGCA GACTACATAGGTTCGAGGAAAAAATATTTAACTTGCTCACGAGTCGGCGT ACCCCCCCCCCCTCCCCCTCCCCCCCCCTCCTTGTTTTGTCGGCCCCCTC TCTCTCGTTTCGGTTGGCTCTGGCGTGCGGCGCAACTTCGATCCGGCCGA CGAGGGAGCAGGAGACAACCCCGAGCACTCGGACCAGTCCACGGTGGAGT TCTACGTAGCGAAGATCGGATACCAGGCGTACTGCGAATATCAGATGCAG CTCTTGGAGGACCTGGATGGTGAGGCAGGCGCAAATAAACGAGAAACAGC AACAGCAATAAACCCCCCGCTTGCCTTCTTATTTTTGGATATTCTCGGAG GGTGTATTTATTTTTATGTGCAAATGGAATGATGAAGCCATGCTGCGCGT GCTTTCGTTTCGAGGGACCTTTTCCGTTCCCGTGGTAACCACGCGGTCTC GTTCGGTCGAAGTTCTGAGACAAAGCTGCGTCGGTGGTACATACGTGCAG ATCGCGCCACCGCTTAAAGAACCTCCTATTTTGAGCGAGGCTCGGATTCT TAGTCCTCTGTGGGGGAACTAATGCTCCGTACATTGCCTTTATGTAGGTT TTAGTGTAGAGGTTCTTATCCGAGCATCTCAAATGTGGGCAAGTTCTTAG ACTACATTTTTAAGTTTTTTTTTGTGACCTTGATTTTCTTTAATTGCCTC CCCAAGTTCTTAAGTGGTGGCGCGCTCTGCACATACATACATACGCGCTA ATTAATTCCATCGTTCGTTCTGGAGGTTTTGATGAGATCTGTTGGGCCTG CGCTGCTTGGTAGGTATGAATATCGTGTGAAGCTTATGTAACGCTTAACT CCATGAACCGAACCGAACCGAACCGAACCGAACCGAACCGAACCGAACCA TATTGTCCTTTAGCGTGCTCGTTGTTGCCGTTGTTGTGCGCTGTTGTTTC TTTTGTGGAAACGATCCAGTGACGGACCCCAGCTTGAAGCCGTACTACGC CTGGAAGCTAAGCCCCAAAGTGGGCTTCTTCATGACGGACAACCGGATCT CGCGCACCCTCCACCGGTGATTCGCCTGTTTTGGGCCTGTTGCTGTTGCT GCTCTTCTGTTGATGCTGCTGCTGCTATTGATCCTGTTGGTGCTGCTGCT GCTGCTCTGCTGCTGCTGTTGTTTGTTGGCTGTTGCTGTTCTTTACTCGT TGCTGTTTTGTGGTATTTTGTTGTCGCTGCTGTCGCTGTCGCCACTGTTG CTGCTTTTGTCGGCGATTGATCGACCCTTGGGTAGACTGCGTAGAGGGAA GCGACCGCCGAACCCTCTTCGCGTTAAAGATCGAGGCGAGCAAGGCAGAG GGGGCGAGCATGGAGAGCTCAGAGGAGGGTAAACCTTCTCTGTGTGGCCA CGGACTGAAACCCCGGCACGATACCCCTCGACCAAAAAAACGCCCGAGGT TAGGCTGCACCCCCGTTGAAGGACAAGCACGCATGCGATTAGAAGACCGC TCCATAGATGGCATTCCGTACTAAACCACGGCTGGAGGCTCACACGCCTC CTGCCTCCTGCTGCGCTCGCTCTTTGCGCGTCGCTCTCGCCGCACTTGTT CGGCGCTTGTTGCCCTTGACACCATGTAACAACTCAGGCACGAACGTCCC GACGAGGAGTGGAAAGACCGCGACTTCATGGGGCCGGCTCAGTGGGAGCG GGTAAGCACCAAAACCGCTCTTTTCAGCTGGCCAGTAAAATAGATAGATG TGAAGATAAAAATAAAATAAAATAAAAGTCCCGTGAGTCGCAGCGAACAT CGAAACCGCGAGGCCTCTCTATCTCTCTTAGGGCAAGGCCTTGGGTGTGT CTATTGTGTGGTGTGGCGTGCTGAAGTGCTTCACGTTTGCCCCGGGACAC ACATAAAATCTGAAAAAAAATTATAATCTGCGGGGCGTTGTGCCGCACGT GCGAACGACCACAACAGCAGTTGTAGTCGAGTGTTGCCTATGTACGTATG TACTTGTGCTAAGAGAAGCTCTGTGTTTGGTTCGTCCATGGATGTGTGTA TCTACCGCAGGTGACCGAGGCGTTCAGCTCGGACTTTGCGGAGTGCGAAA CCGTCTTTTTCGGCACGCCCACGCCCCTGGTCTTCATCAGCCAGTCGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11950:228..5877-

>mRNA_L-elsbetiae_contig11950.1665.1 ID=mRNA_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig11950:228..5877- (Laminarionema elsbetiae ELsaHSoW15)
TCCAGTGTGAGCTGCAACTGCTTCAAGTTCGTCGAAAAGGTGGCCCTGTG
GGACCGACTCGCCCGGGTGGCGGGAGACCTGGACTGCGTGCTGCACCTCG
GCGACCAGATCTACGCAGATACAGACTTTGGCGCCAATCCAGTGTGAGCT
GCAACTGCTTCAAGTTCGTCGAAAAGGTGGCCCTGTGGGACCGACTCGCC
CGGGTGGCGGGAGACCTGGACTGCGTGCTGCACCTCGGCGACCAGATCTA
CGCAGATACAGACTTTGGCGCCAAGAAAGCGGGGGGGGTGGGGTTCGAGT
CCGCGTGGGAGTCGTGCCTGCTGATGCTGGAGGGGCTGGATAGGGCGGAC
TGGGACAGCAAGAGGGAGGACCTCCTCGAGTCCTACCGAAAGACTTACCG
AACGAAAGCGGGGGGGGTGGGGTTCGAGTCCGCGTGGGAGTCGTGCCTGC
TGATGCTGGAGGGGCTGGATAGGGCGGACTGGGACAGCAAGAGGGAGGAC
CTCCTCGAGTCCTACCGAAAGACTTACCGAACCACCTGGAACATGCCGAA
AGTGGCCACGGTCCTCGCGAGTGCCGCCAACTACATGATCTGCGACGATC
ACGAGTTCGTCGACAACCTGGCACCTGGAACATGCCGAAAGTGGCCACGG
TCCTCGCGAGTGCCGCCAACTACATGATCTGCGACGATCACGAGTTCGTC
GACAACCTGGCAGGAGACAACCCCGAGCACTCGGACCAGTCCACGGTGGA
GTTCTACGTAGCGAAGATCGGATACCAGGCGTACTGCGAATATCAGATGC
AGCTCTTGGAGGACCTGGATGCAGGAGACAACCCCGAGCACTCGGACCAG
TCCACGGTGGAGTTCTACGTAGCGAAGATCGGATACCAGGCGTACTGCGA
ATATCAGATGCAGCTCTTGGAGGACCTGGATGTGACGGACCCCAGCTTGA
AGCCGTACTACGCCTGGAAGCTAAGCCCCAAAGTGGGCTTCTTCATGACG
GACAACCGGATCTCGCGCACCCTCCACCGTGACGGACCCCAGCTTGAAGC
CGTACTACGCCTGGAAGCTAAGCCCCAAAGTGGGCTTCTTCATGACGGAC
AACCGGATCTCGCGCACCCTCCACCGGCACGAACGTCCCGACGAGGAGTG
GAAAGACCGCGACTTCATGGGGCCGGCTCAGTGGGAGCGGGCACGAACGT
CCCGACGAGGAGTGGAAAGACCGCGACTTCATGGGGCCGGCTCAGTGGGA
GCGGGTGACCGAGGCGTTCAGCTCGGACTTTGCGGAGTGCGAAACCGTCT
TTTTCGGCACGCCCACGCCCCTGGTCTTCATCAGCCAGTCGTGAGTGACC
GAGGCGTTCAGCTCGGACTTTGCGGAGTGCGAAACCGTCTTTTTCGGCAC
GCCCACGCCCCTGGTCTTCATCAGCCAGTCGTGA
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