mRNA_L-elsbetiae_contig11950.1665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D8LTV8_ECTSI (PhoD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV8_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 1.590e-151 Identity = 209/238 (87.82%), Postives = 222/238 (93.28%), Query Frame = 1 Query: 1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714 +SVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL+LE L R+DWDSKREDLLE YRKTYRTTWNMP VATVLASAANYMICDDHEFVDNL GDNPEHSD STVEFYVAK+GYQAYCEYQMQLL D+DV D +KP+YAWKLSPKVGFFMTDNRI RTLHR +RPD EW DR+FMGP QW+R+ EAFS+DFAEC+TVFFGTPTPLVFISQS Sbjct: 116 ASVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLILEPLARSDWDSKREDLLECYRKTYRTTWNMPAVATVLASAANYMICDDHEFVDNL-GDNPEHSDTSTVEFYVAKVGYQAYCEYQMQLLRDVDVQDTRVKPFYAWKLSPKVGFFMTDNRIERTLHRQDRPDAEWVDREFMGPDQWDRIKEAFSADFAECQTVFFGTPTPLVFISQS 352
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D8LTV9_ECTSI (PhoD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTV9_ECTSI) HSP 1 Score: 326 bits (836), Expect = 9.760e-106 Identity = 158/274 (57.66%), Postives = 197/274 (71.90%), Query Frame = 1 Query: 4 SVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRT--------TWNMPK---------------------------VATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHE--RPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714 +VSCNC +EK+ LWDRL+ V GD+DCVLHLGDQIYAD DFGAK G V F+SAW++CL MLE +DR+ WD+ R LLE YR+TYR +WN P+ VA VLAS ANYMICDDHEFVD+L GD PEHS+ +T +FYVA++GYQ YCEYQ QLL ++DVTD +L+P+YA++LSPK+GFFMTDNR+ R+LHR+E + EWKDR+F+GP QW R+ +AF +DFA+CETV FG PTPLVFISQ+ Sbjct: 136 AVSCNCHTHIEKLGLWDRLSTVVGDVDCVLHLGDQIYADEDFGAKSGGSVRFDSAWQACLTMLEDVDRSGWDALRPQLLECYRRTYRKFVRGIEHGSWNGPRRPAQGMLLFSTMFWTRSIPLNMGTSPFVAKVLASTANYMICDDHEFVDDL-GDEPEHSNHTTPDFYVARVGYQVYCEYQKQLLNEIDVTDHTLRPFYAFRLSPKLGFFMTDNRVERSLHRYEDGTSEAEWKDREFLGPKQWTRLEQAFRTDFADCETVLFGAPTPLVFISQA 408
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5JSS6_9PHAE (PhoD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS6_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.020e-104 Identity = 148/238 (62.18%), Postives = 181/238 (76.05%), Query Frame = 1 Query: 1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714 ++VSCN EK+ LW RL RV GD+DC+LHLGDQ+Y D +FG K++G FESAW + L +LE L R DWD+ +E++ E YR+ YRTTWNMP A LASAANYMICDDHEF D+L GD P+H + ST+ FYVA + YQ Y EYQ QLLED DVTD S+KPYYA KLSP+VG FMTDNR+ R+LHR + W++R FMGPAQW+RVTEAF +DF C+ V FGTPTPLVF+SQ+ Sbjct: 65 ATVSCNNHALTEKIKLWKRLTRVIGDVDCILHLGDQVYGDVEFGTKESG-EDFESAWHASLTLLEPLQREDWDNHQEEVREFYRECYRTTWNMPFTAICLASAANYMICDDHEFTDDL-GDEPDHHNPSTLAFYVATLAYQVYNEYQHQLLEDCDVTDLSIKPYYACKLSPRVGLFMTDNRVERSLHRAQGTKSSWENRTFMGPAQWDRVTEAFENDFDSCDVVLFGTPTPLVFLSQT 300
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: D7FMC9_ECTSI (PhoD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC9_ECTSI) HSP 1 Score: 316 bits (809), Expect = 5.030e-103 Identity = 149/238 (62.61%), Postives = 182/238 (76.47%), Query Frame = 1 Query: 1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714 ++VSCN EK+ LW RL RV GD+DC+LHLGDQIY D DFG K++G FESAW + L +LE ++R +WD+ +E++ E YR+ YRTTWNMP A LASAANYMICDDHEF D+L GD PEH + ST+ FYVA + YQ Y EYQ QL ED DVTD S+KPYYA KLSP+VGFFMTDNR+ R+LHR + W++R FMGPAQW+RVTEAF +DF C+ V FGTPTPLVF+SQ+ Sbjct: 65 ATVSCNNHALTEKIKLWKRLTRVIGDVDCILHLGDQIYGDVDFGTKESG-EDFESAWHASLTLLEPMERGEWDNHQEEVREFYRECYRTTWNMPFTAICLASAANYMICDDHEFTDDL-GDEPEHHNPSTLAFYVATLAYQVYNEYQHQLHEDCDVTDLSIKPYYACKLSPRVGFFMTDNRVERSLHRAQGTKSSWENRAFMGPAQWDRVTEAFENDFDSCDVVMFGTPTPLVFLSQT 300
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5KIJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.530e-65 Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 1 Query: 346 DNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTDPSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSDFAECETVFFGTPTPLVFISQS 714 D+LAGDNPEHSD STVEFYVAK+GYQAYCEYQMQLL D+DV D +KP+YAWKLSPKVGFFMTDNRI RTL R +RPD EW DR+FMGP QW+R+ AFS+DFAEC+TVFFGTPTPLVFISQS Sbjct: 14 DHLAGDNPEHSDTSTVEFYVAKVGYQAYCEYQMQLLRDVDVQDTRVKPFYAWKLSPKVGFFMTDNRIERTLDRQDRPDAEWVDREFMGPDQWDRLKAAFSADFAECQTVFFGTPTPLVFISQS 136
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A6H5KX82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX82_9PHAE) HSP 1 Score: 122 bits (306), Expect = 6.440e-32 Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = 1 Query: 1 SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE 174 +SVSCNCFKFVEKVALW+RLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE Sbjct: 64 ASVSCNCFKFVEKVALWNRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWE 121
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A9T2H4_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T2H4_PHYPA) HSP 1 Score: 120 bits (300), Expect = 1.790e-27 Identity = 85/247 (34.41%), Postives = 122/247 (49.39%), Query Frame = 1 Query: 7 VSCNCFKFVEKVA-----LWDRLARV--AGDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWES----CLLMLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTD-PSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFI 705 +SCN + + LW L++ AG +DC+LHLGDQIY D D G+ + AW + L+ + R W + + E YR+ YR TW A LA+ N MI DDHE DN GD E D S+ +F+VA+ + EYQ QL ED+D + ++ Y + + VG D R SRT HR D+ K ++G QW +T++ S D F + + +P PLVF+ Sbjct: 200 ISCNKIFITDMLIAPASDLWTHLSKSIEAGKVDCLLHLGDQIYGDGDKRQDAQAGMD-KDAWSDRFRKSMEKLKDVPREKWIDHGDVICEYYREVYRDTWRHAPTAKCLANCPNLMIYDDHEVRDNW-GDVEEDWDPSSADFFVARCAWIVSMEYQRQLYEDVDFSSLENIHEDYHFHVVGGVGLMFLDIRGSRTFHRV--IDDVNK---YLGSRQWNAITKSLSPDGEFGKARALLVCSPAPLVFL 439
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A0G4GS70_VITBC (PhoD domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GS70_VITBC) HSP 1 Score: 119 bits (298), Expect = 2.420e-27 Identity = 88/263 (33.46%), Postives = 122/263 (46.39%), Query Frame = 1 Query: 7 VSCN----CFKFVEKVA-LWDRLARVAGD--LDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL-----MLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDL---DVTDPSLKPYYAWKLSP----------KVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFISQS 714 VSCN K VE LW L + + +D +LH+GD IYAD+D + F+ + C ++E R W ++ E++ E +R YR TW P VLA+ N MI DDHE D+ GD EH D + YVA YQ Y EYQ QL ED +V P+ P + +P +VGF D R +T H +++ D KD MG AQW+ + EA F C V P+ ++S + Sbjct: 102 VSCNKIWTTHKDVEPSGDLWGDLEQRVKERSVDYLLHIGDNIYADSDLYLIEGHKRDFQGPDDECRFAVAKKLIEDKPRDQWVNEYENMCEIFRDVYRLTWGHPPTRRVLANIPNLMILDDHEIRDDW-GDTDEHRDPKNPDHYVAMAAYQCYNEYQRQLYEDFTLHEVPMPNYPPMLPPQPAPHCAYHFHSFGEVGFLFLDLRACKTFHWNDKTD---KDLPHMGAAQWDALREALGEGGTFDGCRFVLVLASVPVAYLSHT 360
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A7S0ZZ70_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZZ70_NOCSC) HSP 1 Score: 109 bits (273), Expect = 3.360e-24 Identity = 80/251 (31.87%), Postives = 120/251 (47.81%), Query Frame = 1 Query: 10 SCNCF-----KFVEKVALWDRLA-RVAGD-LDCVLHLGDQIYADTDF-GAKKAGGVGFESAWESCLLMLE-----GLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVT---DPSLKPY--YAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVF 702 SC+C+ K + LW LA R+ D +DCV+H+GD +Y DTD+ +K VG +A E C + L W + E + E +R YR TW P A A+ N MI DDHE D+ GD P D+S++++++A Y CEYQ L ED + P P + +++ VG +M D R ++ H +E+ D ++ MG QW A S F++C + P P + Sbjct: 16 SCDCYYNTRDKVEPESDLWRDLADRIERDEIDCVVHIGDNVYNDTDYCDIEKGKKVGQYTADEDCKWNIARKFVVNLPPQQWPTAIEQVREVFRAAYRETWAHPPAAFAFANCPNLMIFDDHEVRDDW-GDRPGDKDRSSLDWFLASQCYFVICEYQRVLFEDTALPVQWSPQTWPRQTFYFQVFGDVGVYMQDIRGCKSFHYNEQTDLQFP---MMGAHQWSEFERALSPGGVFSQCRILIVAGPEPFAY 262
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Match: A0A1Y1I3T4_KLENI (PhoD domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3T4_KLENI) HSP 1 Score: 107 bits (268), Expect = 3.470e-23 Identity = 77/229 (33.62%), Postives = 112/229 (48.91%), Query Frame = 1 Query: 46 LWDRLA-RVA-GDLDCVLHLGDQIYADTDFGAKKAGGVGFESAWESCLL---MLEGLDRADWDSKREDLLESYRKTYRTTWNMPKVATVLASAANYMICDDHEFVDNLAGDNPEHSDQSTVEFYVAKIGYQAYCEYQMQLLEDLDVTD-PSLKPYYAWKLSPKVGFFMTDNRISRTLHRHERPDEEWKDRDFMGPAQWERVTEAFSSD--FAECETVFFGTPTPLVFIS 708 LW L R+A G +D +LHLGDQ+YAD D KA S + ML+G+ W + + YR+ YR TW P A LA+ + MI DDHE DN GD P D +++ +VA+ ++ EYQ QL ED+D + + + + VG D R SRT HR RP++ +K ++G QW + A F + +P P+VF++ Sbjct: 184 LWHHLEKRIAKGQVDMMLHLGDQVYADGDKAFDKAAAREHTSLSNKFAVAEDMLKGIPWEQWPQYYDRICAIYREIYRETWAHPPTARCLATCPSIMIYDDHEVRDNW-GDLPTDWDPASLHMFVARCAWRVQLEYQRQLHEDVDFAHLERITRDFHFHVVGGVGLMFLDIRGSRTFHR--RPNDPYK---YLGSDQWTEIKSALGRGGIFDGVRALLVCSPAPVVFLT 406 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11950.1665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11950.1665.1 >prot_L-elsbetiae_contig11950.1665.1 ID=prot_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp SSVSCNCFKFVEKVALWDRLARVAGDLDCVLHLGDQIYADTDFGAKKAGGback to top mRNA from alignment at L-elsbetiae_contig11950:228..5877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11950.1665.1 ID=mRNA_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5650bp|location=Sequence derived from alignment at L-elsbetiae_contig11950:228..5877- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11950:228..5877- >mRNA_L-elsbetiae_contig11950.1665.1 ID=mRNA_L-elsbetiae_contig11950.1665.1|Name=mRNA_L-elsbetiae_contig11950.1665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig11950:228..5877- (Laminarionema elsbetiae ELsaHSoW15)back to top |