mRNA_L-elsbetiae_contig11949.1663.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: R6IML5_9PROT (Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 TaxID=1262706 RepID=R6IML5_9PROT) HSP 1 Score: 211 bits (536), Expect = 7.070e-68 Identity = 103/145 (71.03%), Postives = 116/145 (80.00%), Query Frame = 1 Query: 1 LSHLSVSTEPVSRLRHWCSSEYLRISPLHSEFHSPLSDSRLPVSKAVPRLSPGISPLT*KSAYVRFTPSNSEQR*PPSYYRGCWHEVSRGFFTGYRHYLHRRKSFTTLRPSSLTRHGWIRLAPIVQYSPLLPPVGVWAVSQSQCG 435 LS LSV+ +P SRLRHWCS++YLRISPLH FH PL +S V A+P+LS GISPL+ +AY FTPSNSEQR PPSYYRGCWHEVSRGFF YRH+ H RKSFT +PSSLTRHGW+R+A I QYS LLPPVGVW VSQ QCG Sbjct: 2 LSSLSVNIQPDSRLRHWCSTQYLRISPLHWVFHYPLCNSSHIVIMAIPKLSSGISPLSYITAYTPFTPSNSEQRLPPSYYRGCWHEVSRGFFRCYRHHRHTRKSFTIRKPSSLTRHGWVRVASIAQYSSLLPPVGVWTVSQFQCG 146
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: H6SIC9_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC9_PARPM) HSP 1 Score: 173 bits (439), Expect = 1.090e-53 Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 127 VSKAVPRLSPGISPLT*KSAYVRFTPSNSEQR*PPSYYRGCWHEVSRGFFTGYRHYLHRRKSFTTLRPSSLTRHGWIRLAPIVQYSPLLPPVGVWAVSQSQCG 435 VSKA P LSPG+SPLT +AY FTPS+SEQR PPSYYRGCWHEVSRGFF YRH+LH RKSFTT RPSSLTRHG +R++PI QYSPLLPPVGVWAVSQSQCG Sbjct: 2 VSKAFPGLSPGLSPLTDLTAYALFTPSDSEQRLPPSYYRGCWHEVSRGFFWCYRHHLHTRKSFTTRRPSSLTRHGCVRVSPIAQYSPLLPPVGVWAVSQSQCG 104
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A0V0H4B3_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H4B3_SOLCH) HSP 1 Score: 154 bits (389), Expect = 1.640e-45 Identity = 86/146 (58.90%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 1 LSHLSVSTEPVSRLRHWCSSEYLRISPLHSEFHSPLSDSRLPVSKAVPRLSPGISPLT*KSAYVRFTPSNSEQR*PPSYYRGCWHEVSRGFFTGYRHYLHRRKSF-TTLRPSSLTRHGWIRLAPIVQYSPLLPPVGVWAVSQSQCG 435 LS +SV PV RLR WCSS+YLRISPLH EF PL S VS LSP + T + Y FTP+NS R PP YYRGCWH VSRG F YR RK+ TT PSS TR+ +RL+PI + SPLLPPVGVWAVSQSQCG Sbjct: 1 LSSMSVRCSPVGRLRCWCSSQYLRISPLHWEFLLPLLPSSXSVSTPSMELSPTLXQQTXLTTYGLFTPNNSGXRLPPPYYRGCWHGVSRGLFLRYRQVSSLRKAXXTTQGPSSRTRYCSVRLSPIAENSPLLPPVGVWAVSQSQCG 146
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A0S6TJ15_9PROT (Uncharacterized protein n=1 Tax=Gluconobacter frateurii NBRC 103465 TaxID=1307834 RepID=A0A0S6TJ15_9PROT) HSP 1 Score: 129 bits (323), Expect = 8.500e-36 Identity = 68/102 (66.67%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 129 IKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 +K SS+V+P DFT D LRALYAQ FR TL P + GLL R+PS SSP+K LYNPK F THAA LDQA AHCPIFPTAASRRSLGRVSVPVW Sbjct: 3 LKCSSQVKPGDFTSDCINRLRALYAQSFRATLRPLRITAAAGTKLAGLLLRVPSSSSPSKVLYNPKTFFTHAALLDQAFAHCPIFPTAASRRSLGRVSVPVW 104
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A6A5L825_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L825_LUPAL) HSP 1 Score: 132 bits (333), Expect = 9.480e-36 Identity = 80/142 (56.34%), Postives = 85/142 (59.86%), Query Frame = 3 Query: 9 PQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 P RQ + PPSP VFF ISTNFTSTLG+P +S LK +SIK S+ PGLL LPS SS AKELYNPKAFITHAA LDQACAHCPIFPTAASRRSLGRVSVPVW Sbjct: 14 PDRQCPSRWPPSPPVFFPISTNFTSTLGIPPSSPELKPASIKSYSQ---------------------------------------PGLLLTLPSSSSRAKELYNPKAFITHAALLDQACAHCPIFPTAASRRSLGRVSVPVW 116
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL) HSP 1 Score: 138 bits (348), Expect = 2.610e-35 Identity = 83/144 (57.64%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 3 FAPQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 FAPQRQ + PPSP VFF ISTNFTSTLG+P +S LK +SIK S+ PGLL LPS SS AKELYNPKAFITHAA LDQACAHCPIFPTAASRRSLGRVSVPVW Sbjct: 444 FAPQRQCPSRWPPSPPVFFPISTNFTSTLGIPPSSPELKPASIKSYSQ---------------------------------------PGLLLTLPSSSSRAKELYNPKAFITHAALLDQACAHCPIFPTAASRRSLGRVSVPVW 548
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL) HSP 1 Score: 138 bits (348), Expect = 3.650e-35 Identity = 83/144 (57.64%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 3 FAPQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 FAPQRQ + PPSP VFF ISTNFTSTLG+P +S LK +SIK S+ PGLL LPS SS AKELYNPKAFITHAA LDQACAHCPIFPTAASRRSLGRVSVPVW Sbjct: 421 FAPQRQCPSRWPPSPPVFFPISTNFTSTLGIPPSSPELKPASIKSYSQ---------------------------------------PGLLLTLPSSSSRAKELYNPKAFITHAALLDQACAHCPIFPTAASRRSLGRVSVPVW 525
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL) HSP 1 Score: 138 bits (348), Expect = 3.690e-35 Identity = 83/144 (57.64%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 3 FAPQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 FAPQRQ + PPSP VFF ISTNFTSTLG+P +S LK +SIK S+ PGLL LPS SS AKELYNPKAFITHAA LDQACAHCPIFPTAASRRSLGRVSVPVW Sbjct: 421 FAPQRQCPSRWPPSPPVFFPISTNFTSTLGIPPSSPELKPASIKSYSQ---------------------------------------PGLLLTLPSSSSRAKELYNPKAFITHAALLDQACAHCPIFPTAASRRSLGRVSVPVW 525
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: A0A6A5KZ04_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KZ04_LUPAL) HSP 1 Score: 132 bits (333), Expect = 3.740e-34 Identity = 80/142 (56.34%), Postives = 85/142 (59.86%), Query Frame = 3 Query: 9 PQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 P RQ + PPSP VFF ISTNFTSTLG+P +S LK +SIK S+ PGLL LPS SS AKELYNPKAFITHAA LDQACAHCPIFPTAASRRSLGRVSVPVW Sbjct: 14 PDRQCPSRWPPSPPVFFPISTNFTSTLGIPPSSPELKPASIKSYSQ---------------------------------------PGLLLTLPSSSSRAKELYNPKAFITHAALLDQACAHCPIFPTAASRRSLGRVSVPVW 116
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Match: M1DBW2_SOLTU (30S ribosomal protein S12, chloroplastic n=3 Tax=Pentapetalae TaxID=1437201 RepID=M1DBW2_SOLTU) HSP 1 Score: 126 bits (317), Expect = 2.110e-32 Identity = 80/144 (55.56%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 3 FAPQRQYRASEPPSPLVFFRISTNFTSTLGVPLTSLGLKTSSIKGSSEVEPRDFTPDLKVSLRALYAQ*FRTTLAPFVLPRLLARS*PGLLYRLPSLSSPAKELYNPKAFITHAAWLDQACAHCPIFPTAASRRSLGRVSVPVW 434 F Q Q R S SPLVFF IST+FT+ +P L+ S S VEP D T DLK L+ LYAQ FR TLA VLPRLLA++ SSP KE+++P AF HAA L QA AHC FPTAASRRSLGRVSVPVW Sbjct: 113 FVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN-------TVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVW 249 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11949.1663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11949.1663.1 >prot_L-elsbetiae_contig11949.1663.1 ID=prot_L-elsbetiae_contig11949.1663.1|Name=mRNA_L-elsbetiae_contig11949.1663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=59bp LSHLSVSTEPVSRLRHWCSSEYLRISPLHSEFHSPLSDSRLPVSKAVPRLback to top mRNA from alignment at L-elsbetiae_contig11949:4613..5047+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11949.1663.1 ID=mRNA_L-elsbetiae_contig11949.1663.1|Name=mRNA_L-elsbetiae_contig11949.1663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=435bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:4613..5047+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11949:4613..5047+ >mRNA_L-elsbetiae_contig11949.1663.1 ID=mRNA_L-elsbetiae_contig11949.1663.1|Name=mRNA_L-elsbetiae_contig11949.1663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=354bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:4613..5047+ (Laminarionema elsbetiae ELsaHSoW15)back to top |