mRNA_L-elsbetiae_contig11949.1662.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11949.1662.1
Unique NamemRNA_L-elsbetiae_contig11949.1662.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A1Q9C0X1_SYMMI (Uncharacterized protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C0X1_SYMMI)

HSP 1 Score: 303 bits (777), Expect = 8.670e-97
Identity = 181/273 (66.30%), Postives = 188/273 (68.86%), Query Frame = 3
Query:  765 PPNALKALDHSHYQCPSPHRPKAARSIDSKTSFTRSCPANARSATLQGKRPS---T*GDQRRH---------DPTSGSPCN*SPASNGTHEGPYPAADTSHVPAPLQAEQIFSLRCQGEQAECTKRTPRKRVLILRMAANTLDRNHKGNRETTRMNSMSGERPEQWWAGEDLNLRPHAYQAQVAAVKATGGARRDRTDDLMLAKHALSQLSYGPRRNR-NNHPCLLFQVSECPSGKPDEDRMDILRKEVIQPQVSAPPSGKANSHGVTGGVYK 1544
            PP AL  L    Y     HRPKAARSIDSKTSFTRSCPANARSATLQGK  +   T GD  R            T             T + PY    +S          ++ ++     A    R  RKRVLILRM AN LDRN  G RET RMNSMSGERPEQWWAGEDLNLRPHAYQ  VAAVKATGGARRDRTDDLMLAKHALSQLSYGPRRNR    PCLLFQVSECPSGKPDEDRMDILRKEVIQPQVSAPPSGKANSHGVTGGVYK
Sbjct:   31 PPGALTGLPSQAYGTLR-HRPKAARSIDSKTSFTRSCPANARSATLQGKSQAHKGTRGDTNRQADRTATDRRQATERMKARIRLRIQATFQPPYRPNRSS----------LYDVKVNRRNAR--SRASRKRVLILRMIANRLDRNQTGYRETVRMNSMSGERPEQWWAGEDLNLRPHAYQ--VAAVKATGGARRDRTDDLMLAKHALSQLSYGPRRNRIRQDPCLLFQVSECPSGKPDEDRMDILRKEVIQPQVSAPPSGKANSHGVTGGVYK 288          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6A5L965_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L965_LUPAL)

HSP 1 Score: 196 bits (497), Expect = 6.460e-51
Identity = 120/228 (52.63%), Postives = 135/228 (59.21%), Query Frame = 3
Query:  162 SDILNRPI---------KTRFRCAYTFRLKLACQIKSLTHYTKGTPSGLRPPTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYGTITRYGPTFQTVPVLTIRPLAWSAFARHY*RSLC*CPFLRVLRCFSSPGLPPCGYSLRSGF-PHSEIAGSKLIRSSPTLIAAYHVLHRLLSPRHPPNALKALDHSHYQCPS 815
            +D+ N P+          TRFRCAYT+RLKLA   KSLTHYTKGTPSGLRPPT CRH VSGS+SLP SGCFSPFPHGTCSLSV  EYLGLE G PMFRQDFTCPALL+D        T T   P    +  L         F  H     C  P  R L   ++ G+     S R+ F PH +   +    S+     +YHVLHRL  PRHPPNAL  LD SH QC S
Sbjct:  574 TDLRNAPLPLLKEESSASTRFRCAYTYRLKLASYTKSLTHYTKGTPSGLRPPTACRHPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNEC----STSTGLSPILARLSNL-------FDFIPH-----CHWPGPRSLA--TTCGVSVDVLSCRNLFCPHGQGLRTARRISADGRAPSYHVLHRLCMPRHPPNALTTLDRSHCQCSS 783          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19)

HSP 1 Score: 174 bits (440), Expect = 2.370e-47
Identity = 86/119 (72.27%), Postives = 93/119 (78.15%), Query Frame = 3
Query:  177 RPIKTRFRCAYTFRLKLACQIKSLTHYTKGTPSGLRPPTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYG---TITRYGPTFQTVP 524
            RP++TRFR AYT+RLKLAC  KSLTHYTKGTPS LR PTVCRH VSGS+SLPSSGCFSPFPHGTCSLSV  EYLGLE G PMFRQDFTCPALL+D     P G   TI +    F  +P
Sbjct:   32 RPVQTRFRYAYTYRLKLACYTKSLTHYTKGTPSPLRAPTVCRHPVSGSISLPSSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNQCSTPTGLSPTIAKLSNLFGFIP 150          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL)

HSP 1 Score: 178 bits (451), Expect = 5.240e-45
Identity = 126/273 (46.15%), Postives = 152/273 (55.68%), Query Frame = 3
Query:  171 LNRPIKTRFRCAYTFRLKLACQIKSLTHYTKGTPSGLRP-PTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYGTITRYGPTFQTVPVLTIRPLAWSAFARHY*RSLC*CPFLRVLRCFSSPGLPPCGYSLRSGFP-------HSEIAGSKLIRSSPTLIAAYHVLHRLLSPRHPPNALKALD-HSHYQCPSPHRPKAARSIDSKTS-FTRSCPANARSATLQGKRPST*GDQRR-HDPTS 956
            L RPI+TRFRCA T+RLKLA   KSLTHYTKGTPS     PT CRH VSG+VSLP SGCFSPFPHGT +LSV +EYLGLEGGPPMFRQ FTCPALL D   F   G                + P A +  +R +          R+ R    PG  P   +  SG         + +++  +  R SP LIA  +VLHRL  PRHPP+AL+ LD +S+    +  R K AR +  +TS F RS    AR +  +G    T       HDP S
Sbjct:    3 LGRPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDCFRFIRTG----------------LSP-AMARLSRRF----------RLCRSNHWPG--PRSLATTSGVSVDVLSSGYLDVSVRRPARGSPKLIATCYVLHRLSVPRHPPDALQTLDLNSNENACATRRNKPARELIDRTSCFRRSMLLPARISPGRGASSVTCTSSSLVHDPAS 246          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6B2EHB1_9DIPT (Putative secreted protein (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EHB1_9DIPT)

HSP 1 Score: 158 bits (400), Expect = 2.740e-43
Identity = 77/110 (70.00%), Postives = 82/110 (74.55%), Query Frame = 2
Query:  308 GFRVCFTPLVGVLFTFPSRYLFAIGRQGVLRLGGWSPHVQTGFHVSRPTRGPYRFLPVRDYHPLWSDFPDGSGSYDKATGLVRVRSPLLTESLLMSFPPGTEMFQFPGFA 637
            GFR CFTPL+GVLFTFPSRYLF IG   V RL GWSP+VQTG HVSRPT+       +R  HPLW DFPD S +    TGLVRVRSPLL ES LMSFPP TEMFQF GFA
Sbjct:    1 GFRYCFTPLIGVLFTFPSRYLFTIGHARVFRLRGWSPYVQTGLHVSRPTQVLMFHFRIRGCHPLWPDFPDCSANSPSGTGLVRVRSPLLAESRLMSFPPATEMFQFAGFA 110          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: Q3BKI1_9PROT (Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI1_9PROT)

HSP 1 Score: 163 bits (413), Expect = 3.200e-43
Identity = 80/104 (76.92%), Postives = 85/104 (81.73%), Query Frame = 3
Query:  177 RPIKTRFRCAYTFRLKLACQIKSLTHYTKGTPSGL-RPPTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYG 485
            RPI+TRFRCAYT+RLKLA    SLTHYTKGTPS   R PT CRHSVSG+VSLP SGCFSPFPHGT SLSV +EYLGLE GPPMFRQDFTCPALL+    F P G
Sbjct:   47 RPIQTRFRCAYTYRLKLAAYTNSLTHYTKGTPSPFKRAPTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALLKADTRFTPTG 150          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6G5ADV0_RHIMP (Uncharacterized protein (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ADV0_RHIMP)

HSP 1 Score: 155 bits (393), Expect = 5.150e-42
Identity = 80/109 (73.39%), Postives = 85/109 (77.98%), Query Frame = 2
Query:  302 AFGFRVCFTPLVGVLFTFPSRYLFAIGRQGVLRLGGWSPHVQTGFHVSRPTRGPYRFLPVRDYHPLWSDFPDGSGSYDKATGLVRVRSPLLTESLLMSFPPGTEMFQFP 628
            A  FR+CFTPLVGVLFTFPSRYLF IGR+GVLRLGGWSPHVQTGFHVSRPTR     L      P  +DFP  S  + K+TGLV VRSPLL ES LMSFPPGTEMFQFP
Sbjct:    1 ASDFRICFTPLVGVLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPTRVSC-CLTSTGLSPAMADFPFRSTLFHKSTGLVPVRSPLLRESRLMSFPPGTEMFQFP 108          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A0A7RQ73_9THEM (Uncharacterized protein n=1 Tax=Thermotoga sp. TBYP3.1.4.1 TaxID=1587550 RepID=A0A0A7RQ73_9THEM)

HSP 1 Score: 156 bits (394), Expect = 6.700e-40
Identity = 124/301 (41.20%), Postives = 140/301 (46.51%), Query Frame = 2
Query:    5 ISRRTSYFRV*LAFHP*PQLIPDFFNRRGFGPPVRVTAPSTWSWLDHSVSGLIRHTKSPY*DSLSLRLHLPA*ACMSN*VADPLYKRYAV----RLAPS---DCL*AFGFRVCFTPLVGVLFTFPSRYLFAIGRQGVLRLGGWSPHVQTGFHVSRPTR--GPYRFLPVRDYHPLWSDFP-------DGSGSYDKATGLVR-----------------------VRSPLLTESLLMSFPPGTEMFQFPGFAPL---RVLLTEW-VSPFGNRRIKAYSQLPDAYRSVSRPSSPLVAKASTECP 778
            IS RTSY RV LAFH  PQ+I   F    FGPPV    PS    + H  SGL   T+ P      +R             + P   R  +    R  P      L    F+V F    GVLFTFPSRY   IGR+ V  LGGWSP + TGFHVSR TR  GP    P        S  P       +G  +  +  GL R                       VRSPLL ES L+SFP GTEMF FP +      RV  T   VSPFGN  I A  +LP AYRS+ RPSSP  AKAST CP
Sbjct:   16 ISGRTSYHRVRLAFHSYPQVIRGLFTVHRFGPPVGFNPPSPCPGVAHPASGLPPVTERP------VRTRFRCGYAFIGLTSPPTATRGLINQKARRHPKWGLRLLVGTRFQVLFHSPSGVLFTFPSRYWCTIGRRVVFSLGGWSPQLPTGFHVSRGTREHGPGSPSPFAYGAVTLSGPPSQVVRLEEGFVTPRRVRGLARPCPATPAWQRPRALTPRWFGLLPVRSPLLGESRLISFPRGTEMFHFPRYRTAFRRRVASTATQVSPFGNPGINACLRLPRAYRSLPRPSSPPAAKASTACP 310          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL)

HSP 1 Score: 159 bits (402), Expect = 7.530e-38
Identity = 158/477 (33.12%), Postives = 188/477 (39.41%), Query Frame = 3
Query:  171 LNRPIKTRFRCAYTFRLKLACQIKSLTHYTKGTPSGLRP-PTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYGTITRYGPTFQTVPVLTIRPLAWSAFARHY*RSLC*CPFLRVLRCFSSPGLPPCGYSLRSGFPHSEIAGSKLIRSSPTLIAAYHVLHRLLSPRHPPNALKALDHSHYQCPSPHRPKAARSIDSKTSFTRSCPANARSATLQGKRPST*GDQRRHDPTSGSPCN*SPASNGTHEGPYPAADTSHVPAPLQAEQIFSLRCQGEQAECTKRTPRKRVLILRMAANTLDRNHKGNRETTRMNSMSGERPEQWWAGEDLNLRPHAYQAQVAAVK----ATGGARRDRTDDLMLAKHALSQLSYGPRRNRNNHPCLLFQVSECPSGKPDED-RMDILRKEVIQPQV-------------SAPPSGKANSHGVTGGVYK 1544
            L RPI+TRFRCA T+RLKLA   KSLTHYTKGTPS     PT CRH VSG+VSLP SGCFSPFPHGT +LSV +EYLGLEGGPPMFRQ FTCPALL D   F   G                + P A +  +R +          R+ R    PG  P   +  SG             S   L + Y                                     +D      ++C    R   L                                   +P  D +     L AE+                 PR   L L ++     R+H      T   ++        W        P   +A+  +V       GG RRDRTDDL+LAK ALSQLSY P R +N  P  L      P G      R D      +   +             SAPPSGK NSHGVTGGVYK
Sbjct:    3 LGRPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTG----------------LSP-AMARLSRRF----------RLCRSNHWPG--PRSLATTSGV------------SVDVLSSGY-------------------------------------LDVSVRREQACSRADRQDQL-----------------------------------FPPFDATPSQDSLPAEE----------------RPRSLALHLHLSMIPPRRHHVAWGTITSAIALVIVHVSVLW------FLPTVLEAERFSVPRHHLVNGGGRRDRTDDLLLAKQALSQLSYAPDR-QNARP--LNMPVRGPLGTASRTVRRDAPAAAEMSAGLEGAGPSRSASLERSAPPSGKTNSHGVTGGVYK 341          
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL)

HSP 1 Score: 159 bits (402), Expect = 8.110e-38
Identity = 158/477 (33.12%), Postives = 188/477 (39.41%), Query Frame = 3
Query:  171 LNRPIKTRFRCAYTFRLKLACQIKSLTHYTKGTPSGLRP-PTVCRHSVSGSVSLPSSGCFSPFPHGTCSLSVDKEYLGLEGGPPMFRQDFTCPALLEDPIAFYPYGTITRYGPTFQTVPVLTIRPLAWSAFARHY*RSLC*CPFLRVLRCFSSPGLPPCGYSLRSGFPHSEIAGSKLIRSSPTLIAAYHVLHRLLSPRHPPNALKALDHSHYQCPSPHRPKAARSIDSKTSFTRSCPANARSATLQGKRPST*GDQRRHDPTSGSPCN*SPASNGTHEGPYPAADTSHVPAPLQAEQIFSLRCQGEQAECTKRTPRKRVLILRMAANTLDRNHKGNRETTRMNSMSGERPEQWWAGEDLNLRPHAYQAQVAAVK----ATGGARRDRTDDLMLAKHALSQLSYGPRRNRNNHPCLLFQVSECPSGKPDED-RMDILRKEVIQPQV-------------SAPPSGKANSHGVTGGVYK 1544
            L RPI+TRFRCA T+RLKLA   KSLTHYTKGTPS     PT CRH VSG+VSLP SGCFSPFPHGT +LSV +EYLGLEGGPPMFRQ FTCPALL D   F   G                + P A +  +R +          R+ R    PG  P   +  SG             S   L + Y                                     +D      ++C    R   L                                   +P  D +     L AE+                 PR   L L ++     R+H      T   ++        W        P   +A+  +V       GG RRDRTDDL+LAK ALSQLSY P R +N  P  L      P G      R D      +   +             SAPPSGK NSHGVTGGVYK
Sbjct:    3 LGRPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTG----------------LSP-AMARLSRRF----------RLCRSNHWPG--PRSLATTSGV------------SVDVLSSGY-------------------------------------LDVSVRREQACSRADRQDQL-----------------------------------FPPFDATPSQDSLPAEE----------------RPRSLALHLHLSMIPPRRHHVAWGTITSAIALVIVHVSVLW------FLPTVLEAERFSVPRHHLVNGGGRRDRTDDLLLAKQALSQLSYAPDR-QNARP--LNMPVRGPLGTASRTVRRDAPAAAEMSAGLEGAGPSRSASLERSAPPSGKTNSHGVTGGVYK 341          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11949.1662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q9C0X1_SYMMI8.670e-9766.30Uncharacterized protein (Fragment) n=1 Tax=Symbiod... [more]
A0A6A5L965_LUPAL6.460e-5152.63Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
UPI001A08AA192.370e-4772.27Uncharacterized protein n=1 Tax=Pseudorhizobium ha... [more]
A0A6A5L4G5_LUPAL5.240e-4546.15Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A6B2EHB1_9DIPT2.740e-4370.00Putative secreted protein (Fragment) n=1 Tax=Phleb... [more]
Q3BKI1_9PROT3.200e-4376.92Uncharacterized protein n=2 Tax=Magnetospirillum g... [more]
A0A6G5ADV0_RHIMP5.150e-4273.39Uncharacterized protein (Fragment) n=1 Tax=Rhipice... [more]
A0A0A7RQ73_9THEM6.700e-4041.20Uncharacterized protein n=1 Tax=Thermotoga sp. TBY... [more]
A0A6A5L866_LUPAL7.530e-3833.12Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A6A5L6S4_LUPAL8.110e-3833.12Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11949contigL-elsbetiae_contig11949:2221..3995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1544
Cds size408
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11949.1662.1prot_L-elsbetiae_contig11949.1662.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11949 3357..3995 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815395.2371364-UTR-L-elsbetiae_contig11949:2220..33561622815395.2371364-UTR-L-elsbetiae_contig11949:2220..3356Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11949 2221..3356 +
1691682877.098667-UTR-L-elsbetiae_contig11949:2220..33561691682877.098667-UTR-L-elsbetiae_contig11949:2220..3356Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11949 2221..3356 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815395.2511687-CDS-L-elsbetiae_contig11949:3356..34901622815395.2511687-CDS-L-elsbetiae_contig11949:3356..3490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3357..3490 +
1691682877.10929-CDS-L-elsbetiae_contig11949:3356..34901691682877.10929-CDS-L-elsbetiae_contig11949:3356..3490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3357..3490 +
1622815395.260524-CDS-L-elsbetiae_contig11949:3545..36641622815395.260524-CDS-L-elsbetiae_contig11949:3545..3664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3546..3664 +
1691682877.1181724-CDS-L-elsbetiae_contig11949:3545..36641691682877.1181724-CDS-L-elsbetiae_contig11949:3545..3664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3546..3664 +
1622815395.2706091-CDS-L-elsbetiae_contig11949:3764..38591622815395.2706091-CDS-L-elsbetiae_contig11949:3764..3859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3765..3859 +
1691682877.1293752-CDS-L-elsbetiae_contig11949:3764..38591691682877.1293752-CDS-L-elsbetiae_contig11949:3764..3859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3765..3859 +
1622815395.279252-CDS-L-elsbetiae_contig11949:3935..39951622815395.279252-CDS-L-elsbetiae_contig11949:3935..3995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3936..3995 +
1691682877.1378288-CDS-L-elsbetiae_contig11949:3935..39951691682877.1378288-CDS-L-elsbetiae_contig11949:3935..3995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11949 3936..3995 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11949.1662.1

>prot_L-elsbetiae_contig11949.1662.1 ID=prot_L-elsbetiae_contig11949.1662.1|Name=mRNA_L-elsbetiae_contig11949.1662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MAANTLDRNHKGNRETTRMNSMSGERPEQWWAGEDLNLRPHAYQAQVAAV
KATGGARRDRTDDLMLAKHALSQLSYGPRRNRNNHPCLLFQVSECPSGKP
DEDRMDILRKEVIQPQVSAPPSGKANSHGVTGGVYK
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mRNA from alignment at L-elsbetiae_contig11949:2221..3995+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11949.1662.1 ID=mRNA_L-elsbetiae_contig11949.1662.1|Name=mRNA_L-elsbetiae_contig11949.1662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1775bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:2221..3995+ (Laminarionema elsbetiae ELsaHSoW15)
ATAGATTTCGCGGAGAACCAGCTATTTCCGAGTTTGATTGGCCTTTCACC CCTAGCCACAACTCATCCCCGACTTTTTCAACAGGCGTGGGTTCGGTCCT CCAGTGCGTGTTACCGCACCTTCAACCTGGTCATGGCTAGATCACTCGGT TTCGGGTCTAATCCGACATACTAAATCGCCCTATTAAGACTCGCTTTCGC TGCGCCTACACCTTCCGGCTTAAGCTTGCATGTCAAATTAAGTCGCTGAC CCATTATACAAAAGGTACGCCGTCAGGCTTGCGCCCTCCGACTGTTTGTA GGCATTCGGTTTCAGGGTCTGTTTCACTCCCCTCGTCGGGGTGCTTTTCA CCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGACAAGGAGTACTTAGG CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCC TACTCGAGGACCCTATCGCTTTCTACCCGTACGGGACTATCACCCGCTAT GGTCCGACTTTCCAGACGGTTCCGGTTCTTACGATAAGGCCACTGGCCTG GTCCGCGTTCGCTCGCCACTACTAACGGAGTCTCTGTTGATGTCCTTTCC TCCGGGTACTGAGATGTTTCAGTTCCCCGGGTTTGCCCCCTTGCGGGTAC TCCTTACGGAGTGGGTTTCCCCATTCGGAAATCGCCGGATCAAAGCTTAT TCGCAGCTCCCCGACGCTTATCGCAGCGTATCACGTCCTTCATCGCCTCT TGTCGCCAAGGCATCCACCGAATGCCCTTAAGGCACTTGATCACTCTCAT TATCAATGCCCATCACCGCACCGCCCGAAGGCAGCGCGAAGCATCGATTC TAAGACCAGTTTCACGAGATCTTGTCCTGCGAACGCGCGGTCAGCAACGC TCCAAGGCAAAAGGCCAAGCACATAAGGGGACCAGAGGAGACACGATCCG ACAAGCGGATCGCCCTGCAACTGATCGCCGGCAAGCAACGGAACGCATGA AGGCCCGTATCCGGCTGCGGATACAAGCCACGTTCCAGCCCCCTTACAGG CCGAACAGATCTTCTCTCTACGATGTCAAGGTGAACAGGCGGAATGCACA AAGCGCACACCCCGCAAACGGGTTCTCATTCTTCGGATGGCCGCGAACAC TCTCGACCGGAACCACAAGGGCAACCGGGAGACGACGCGGATGAACAGCA TGTCCGGGGAAAGACCAGAACAATGGTGGGCCGGGGAGGACTTGAACCTC CGACCTCACGCTTATCAGGCGTGCGCTCTAACCACCTGAGCTACCGGCCC ATCCCTGGCGCGCGGCCACCTGCAGGCAGGTCGCCGCGGTCAAAGCAACT GGTGGAGCCAGACGGGATCGAACCGACGACCTCATGCTTGCAAAGCACGC GCTCTCCCAACTGAGCTATGGCCCCCGGCGCAACAGGAACAACCGTTCCA ACGCGCGCAGACCCGAAGTCATGCTCATCCGAAGAAGAAAGAGAAACGAA GACGGCGGATATCCGCACTTTGTAAAGCGACAGGATCCGACAAGATCCGT GTCTTTTGTTCCAAGTGTCCGAGTGCCCATCCGGCAAGCCGGATGAAGAC AGGATGGACATCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCCCCTACG GCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTTGGCT GCCTCCTGTTGCCAGGTTAGCGCACCACCTTCGGGTAAAGCCAACTCCCA TGGTGTGACGGGCGGTGTGTACAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11949:2221..3995+

>mRNA_L-elsbetiae_contig11949.1662.1 ID=mRNA_L-elsbetiae_contig11949.1662.1|Name=mRNA_L-elsbetiae_contig11949.1662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:2221..3995+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGCGAACACTCTCGACCGGAACCACAAGGGCAACCGGGAGACGAC
GCGGATGAACAGCATGTCCGGGGAAAGACCAGAACAATGGTGGGCCGGGG
AGGACTTGAACCTCCGACCTCACGCTTATCAGGCATGGCCGCGAACACTC
TCGACCGGAACCACAAGGGCAACCGGGAGACGACGCGGATGAACAGCATG
TCCGGGGAAAGACCAGAACAATGGTGGGCCGGGGAGGACTTGAACCTCCG
ACCTCACGCTTATCAGGCGCAGGTCGCCGCGGTCAAAGCAACTGGTGGAG
CCAGACGGGATCGAACCGACGACCTCATGCTTGCAAAGCACGCGCTCTCC
CAACTGAGCTATGGCCCCCGGCGCAACAGGAACAACCGCAGGTCGCCGCG
GTCAAAGCAACTGGTGGAGCCAGACGGGATCGAACCGACGACCTCATGCT
TGCAAAGCACGCGCTCTCCCAACTGAGCTATGGCCCCCGGCGCAACAGGA
ACAACCATCCGTGTCTTTTGTTCCAAGTGTCCGAGTGCCCATCCGGCAAG
CCGGATGAAGACAGGATGGACATCCTTAGAAAGGAGGTGATCCAGCCGCA
GATCCGTGTCTTTTGTTCCAAGTGTCCGAGTGCCCATCCGGCAAGCCGGA
TGAAGACAGGATGGACATCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTA
GCGCACCACCTTCGGGTAAAGCCAACTCCCATGGTGTGACGGGCGGTGTG
TACAAGGTTAGCGCACCACCTTCGGGTAAAGCCAACTCCCATGGTGTGAC
GGGCGGTGTGTACAAG
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