mRNA_L-elsbetiae_contig11949.1660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A8H2LVE7_BURPE (Cell wall-associated hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A8H2LVE7_BURPE) HSP 1 Score: 305 bits (781), Expect = 2.460e-101 Identity = 163/234 (69.66%), Postives = 177/234 (75.64%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRPF*AHHRAPPLPFGRRPPQSNYPPHTVPDVV-APRLDIHDDKGGISRVAPQELALLLRRLPPILHMS*RMPV*SCSKGARGLSV 851 MLSAVI S HSYPAM LA Q VHQR+VH GPLVLG P PTPTADRD+TVSRR +PSSRT+L GEQP PWD LQPQD MSRHRGAK RRY LLG ISLLSP YLLSVERWPFH PPDHYD LS LLDLSVSQ LMPLH +DFRP+ A+ R PPL FGRRPPQSN P TVPD PRL+ ++GGISR AP +LA LPPILH S + P+ S SKG+ GLSV Sbjct: 1 MLSAVISSEHSYPAMRLASQPVHQRFVHSGPLVLGAAPFKLPTPTADRDQTVSRRFKPSSRTSLNGEQPYPWDRLQPQDEMSRHRGAKHRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQLSTLMPLHYQHDFRPYLAYLRTPPLRFGRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPMQSYSKGSWGLSV 234
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A5J4DT10_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg02 TaxID=2080452 RepID=A0A5J4DT10_9BACT) HSP 1 Score: 277 bits (708), Expect = 1.800e-91 Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRP 605 MLSAVI S HSYPA+PLARQQVHQR VHPGPLVLGT PLNSPTPTADRDRTVSRRS+PSSRT+LIGEQPNPWDLLQPQD MSRHRGAK+ RRYGLLG+ISLLSP YLLSVERWPFH GPPDHYDRLS+LLDLSVSQSG LMPLHSS DFRP Sbjct: 1 MLSAVIPSAHSYPAVPLARQQVHQRCVHPGPLVLGTAPLNSPTPTADRDRTVSRRSKPSSRTSLIGEQPNPWDLLQPQDEMSRHRGAKQRRRYGLLGVISLLSPEYLLSVERWPFHTGPPDHYDRLSTLLDLSVSQSGRLMPLHSSADFRP 151
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A397S2L0_9GLOM (Cell wall-associated hydrolase n=4 Tax=Eukaryota TaxID=2759 RepID=A0A397S2L0_9GLOM) HSP 1 Score: 275 bits (702), Expect = 1.470e-90 Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRP 605 M SAVI SV SY A+PLARQQ+HQRYVHPGPLVLGT PL PTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKR RRYGLLG+ISLLSPAYLLSVERWP H GPPDHYDRLSSLLDLSVSQS GLMPLH+++DFRP Sbjct: 1 MPSAVIPSVRSYAALPLARQQLHQRYVHPGPLVLGTKPLKPPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRPRRYGLLGVISLLSPAYLLSVERWPTHAGPPDHYDRLSSLLDLSVSQSSGLMPLHATSDFRP 151
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A1C8C9M4_9HYPH (Glycerol kinase n=10 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1C8C9M4_9HYPH) HSP 1 Score: 272 bits (696), Expect = 1.200e-89 Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRP 605 MLSAVI SV SYPAM L +QQVHQRYVHPGPLVLG DP+N PTPTADRDRTVSRRSEPSSRT LIGEQPNPWDLLQPQD MSRHRGAK+ RRYGLLG+ISLLSPAYLLSVERWPFH PPDHYDRLSSLLDLSVSQSG LMPLHS++DFRP Sbjct: 1 MLSAVILSVFSYPAMLLEKQQVHQRYVHPGPLVLGKDPVNIPTPTADRDRTVSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLSPAYLLSVERWPFHSEPPDHYDRLSSLLDLSVSQSGRLMPLHSTSDFRP 151
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A510LIN6_NEIGO (Cell wall-associated hydrolase n=3 Tax=Neisseria TaxID=482 RepID=A0A510LIN6_NEIGO) HSP 1 Score: 272 bits (696), Expect = 1.060e-88 Identity = 149/215 (69.30%), Postives = 159/215 (73.95%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRPF*AHHRAPPLPFGRRPPQSNYPPHTVPDVV-APRLDIHDDKGGISRVAPQELALLLRRLPPILH 794 MLSA+I S SYPAM LA Q VHQR+VH GPLVLG P+ PTPTADRD+TVSRR +PSSRTTL GEQP PWD LQPQDVMSRHRGAK RRY LLG ISLLSP YLLSVERWPFH PPDHY LS L DLSVSQ L+PLH +DFRP + R PPL FGRRPPQSN P TVPD L+ +GGISR PQ LA LL LPPILH Sbjct: 1 MLSALISSELSYPAMQLALQPVHQRFVHSGPLVLGAAPVKLPTPTADRDQTVSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLPDLSVSQLSYLLPLHYQSDFRPDLGNLRTPPLRFGRRPPQSNCLPCTVPDPDDGSGLEPQRHQGGISRTTPQRLASLLPSLPPILH 215
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: U2W8L0_9PROT (Uncharacterized protein n=1 Tax=Candidatus Micropelagos thuwalensis TaxID=1397666 RepID=U2W8L0_9PROT) HSP 1 Score: 258 bits (660), Expect = 3.500e-84 Identity = 127/151 (84.11%), Postives = 135/151 (89.40%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRP 605 MLSAVI S+ SY AMP ARQQ+ QRYVHPGPLVLGT PL PTPTADRD+TVSRRS+PSSRT LIGEQPNPWDLLQPQD MSRHRGAK+ RRYGLLG+ISLLSPAYLLSVERWPFH GPPDHYDRLSSLL LS SQSG L+PLHS+ DFRP Sbjct: 1 MLSAVIPSILSYAAMPQARQQLDQRYVHPGPLVLGTAPLKFPTPTADRDQTVSRRSKPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQRRRYGLLGVISLLSPAYLLSVERWPFHAGPPDHYDRLSSLLVLSDSQSGRLLPLHSTTDFRP 151
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A382K4W8_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382K4W8_9ZZZZ) HSP 1 Score: 254 bits (649), Expect = 1.480e-82 Identity = 128/149 (85.91%), Postives = 132/149 (88.59%), Query Frame = 3 Query: 153 MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDF 599 MLSAVI S+ SYPA+ LA Q VHQ YVHPGPLVLGT PLNS TP ADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAK RRY LL ISLLSPAYLLSVERWPFH PPDHYDRLS+LLDLSVSQSG LMPLHS+NDF Sbjct: 1 MLSAVISSILSYPALQLALQPVHQWYVHPGPLVLGTAPLNSSTPMADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKHPRRYELLEGISLLSPAYLLSVERWPFHSEPPDHYDRLSTLLDLSVSQSGRLMPLHSTNDF 149
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A0J7YMY6_BETVV (Uncharacterized protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J7YMY6_BETVV) HSP 1 Score: 252 bits (643), Expect = 3.790e-81 Identity = 129/170 (75.88%), Postives = 135/170 (79.41%), Query Frame = 3 Query: 183 SYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRPF*AHHRAPPLPFGRRPPQSNYPPHTVPDV 692 SYPAM LA Q VHQRYVH GPLVLG PL P PTADRD+TVSRR +PSSRTTL GEQP PWD LQPQDVMSRHRGAK RRY LLG ISLLSP YLLSVERWPFH PPDHY LS LLDLSVSQS L+PLH D RP+ R PPLPFGRRPPQSN PP+TVPD+ Sbjct: 2 SYPAMRLASQPVHQRYVHSGPLVLGAGPLKYPAPTADRDQTVSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLRRRYELLGGISLLSPEYLLSVERWPFHSEPPDHYVLLSHLLDLSVSQSSLLLPLHYQYDVRPYLGDLRTPPLPFGRRPPQSNCPPYTVPDL 171
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: I3D5P0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 TaxID=859350 RepID=I3D5P0_9ARCH) HSP 1 Score: 250 bits (638), Expect = 1.900e-80 Identity = 129/179 (72.07%), Postives = 137/179 (76.54%), Query Frame = 3 Query: 216 VHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRPF*AHHRAPPLPFGRRPPQSNYPPHTVPDV-VAPRLDIHDDKGGISRVAP 749 +HQR VH GPLVLG P P PTADRD+TVSRR +PSSRTTL GEQP PWD LQPQDVMSRHRGAK RRY LLG ISLLSP YLLSVERWPFH PPDHYD LS LLDLSVSQS LMPLH DFRP+ + R PPL FGRRPPQSN PP+TVPD PRL+ +GGISR P Sbjct: 1 MHQRCVHSGPLVLGAGPFKFPAPTADRDQTVSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPDPDYGPRLEPQQHQGGISRSTP 179
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Match: A0A6A5LBS9_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LBS9_LUPAL) HSP 1 Score: 250 bits (638), Expect = 1.750e-77 Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 3 Query: 210 QQVHQRYVHPGPLVLGTDPLNSPTPTADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRFRRYGLLGIISLLSPAYLLSVERWPFHEGPPDHYDRLSSLLDLSVSQSGGLMPLHSSNDFRP 605 QQ+HQRYVHPGPLVLGTDP+N PTPTADRDRTVSRRSEP+SRT L GEQP PWDLLQPQD MSRHRGAK+ RRYGLLG+ISLLSPAYLLSVERWPFH GPPDHYDRLSSLLDLSVSQSGGLMPLHS+ DFRP Sbjct: 164 QQIHQRYVHPGPLVLGTDPVNIPTPTADRDRTVSRRSEPNSRTALNGEQPYPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLSPAYLLSVERWPFHTGPPDHYDRLSSLLDLSVSQSGGLMPLHSTTDFRP 295 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11949.1660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11949.1660.1 >prot_L-elsbetiae_contig11949.1660.1 ID=prot_L-elsbetiae_contig11949.1660.1|Name=mRNA_L-elsbetiae_contig11949.1660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp MLSAVIRSVHSYPAMPLARQQVHQRYVHPGPLVLGTDPLNSPTPTADRDRback to top mRNA from alignment at L-elsbetiae_contig11949:271..1164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11949.1660.1 ID=mRNA_L-elsbetiae_contig11949.1660.1|Name=mRNA_L-elsbetiae_contig11949.1660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:271..1164+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11949:271..1164+ >mRNA_L-elsbetiae_contig11949.1660.1 ID=mRNA_L-elsbetiae_contig11949.1660.1|Name=mRNA_L-elsbetiae_contig11949.1660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig11949:271..1164+ (Laminarionema elsbetiae ELsaHSoW15)back to top |